KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:02 2014 Check: 00 .. Name: ENSTTRP00000013545/1-648 Len: 854 Check: 1443 Weight: 1.00 Name: bmy_06565T0/1-700 Len: 854 Check: 8820 Weight: 1.00 Name: BACU002116/1-811 Len: 854 Check: 7393 Weight: 1.00 Name: ENSBTAP00000020933/1-818 Len: 854 Check: 8853 Weight: 1.00 Name: ENSP00000468312/1-850 Len: 854 Check: 129 Weight: 1.00 // 1 50 ENSTTRP00000013545/1-648 ---------- ---------- ---------- -----MSSFG A--------- bmy_06565T0/1-700 ---------- ---------- ---------- -----MAERG PAFCGLYDTS BACU002116/1-811 ---------- ---------- ---------- -----MAERG PAFCGLYDTS ENSBTAP00000020933/1-818 ---------- ---------- ---------- -----MAERG PAFCGLYDTS ENSP00000468312/1-850 MLERRALLWQ REAGPGWGDR ARAGTGGAGG GCGGAMAERG PAFCGLYDTS 51 100 ENSTTRP00000013545/1-648 ---------- ---------- ---------- ---------- ---------- bmy_06565T0/1-700 SLLQYCNDDN LSGTSGMEVD DRVSALEQRL QLQEDELAVL KAALADALRR BACU002116/1-811 SLLQYCNDDN LSGTSGMEVD DRVSALEQRL QLQEDELAVL KAALADALRR ENSBTAP00000020933/1-818 SLLQYCNDDN LSGTSGMEVD DRVSALEQRL QLQEDELAVL KAALADALRR ENSP00000468312/1-850 SLLRYCNDDN LSGTSGMEVD DRVSALEQRL QLQEDELAVL KAALADALRR 101 150 ENSTTRP00000013545/1-648 ---------- ---------- ---------- ---------- ---------- bmy_06565T0/1-700 LRACEEQGAA LRARGTPKGR APPRLGTTAS GIFAKLEG-- --TPLNGSGP BACU002116/1-811 LRACEEQGAA LRARGTPKGR APPRLGTTAS GIFAKLEG-- --TPLNGSGP ENSBTAP00000020933/1-818 LRACEEQGAA LRARGTPKGR APPRLGTTAS -VCQLLKGLP TRTPLNGSGP ENSP00000468312/1-850 LRACEEQGAA LRARGTPKGR APPRLGTTAS -VCQLLKGLP TRTPLNGSGP 151 200 ENSTTRP00000013545/1-648 ---------- ---------- ---------- ---------- ---------- bmy_06565T0/1-700 PRRVGGYATS PSSPKKEATS GR-SARRYLS PERLASVRRE DPRSRTTSSS BACU002116/1-811 PRRVGGYATS PSSPKKEATS GR-SARRYLS PERLASVRRE DPRSRTTSSS ENSBTAP00000020933/1-818 PRRVGGYATS PSSPKKEATS GRSSARRYLS PERLASVRRE DPRSRTTSSS ENSP00000468312/1-850 PRRVGGYATS PSSPKKEATS GRSSVRRYLS PERLASVRRE DPRSRTTSSS 201 250 ENSTTRP00000013545/1-648 --------GK TKEVIFSM-E EGSVKMFLRG RPVLMLIPDE LAPSYSLDTR bmy_06565T0/1-700 SNCSAKKEGK TKEVIFSM-E EGSVKMFLRG RPVPMLMPDE LTPSYSLDTR BACU002116/1-811 SNCSAKKEGK TKEVIFSM-E EGSVKMFLRG RPVPMLIPDE LAPSYSLDTR ENSBTAP00000020933/1-818 SNCSAKKEGK TKEVIFSMAE EGSVKMFLRG RPVPMLIPEE LVPTYSLDTR ENSP00000468312/1-850 SNCSAKKEGK TKEVIFSV-E DGSVKMFLRG RPVPMMIPDE LAPTYSLDTR 251 300 ENSTTRP00000013545/1-648 SELPSRRLKL DW--VYGYRG RDCRANLYLL PTGEIVYFVA SVAVLYSVEE bmy_06565T0/1-700 SELPSRRLKL DW--VYGYRG RDCRANLYLL PTGEIVYFVA SVAVLYNVEE BACU002116/1-811 SELPSRRLKL DW--VYGYRG RDCRANLYLL PTGEIVYFVA SVAVLYNVEE ENSBTAP00000020933/1-818 SELPSHRFKL DWWHCYGYRG RDCRANLYLL PTGEIVYFVA SVAVLYSVEE ENSP00000468312/1-850 SELPSCRLKL EW--VYGYRG RDCRANLYLL PTGEIVYFVA SVAVLYSVEE 301 350 ENSTTRP00000013545/1-648 QRQRHYLGHN DDIKCLAVHP DMVTIATGQV AGTTKEGKPL PPHVRVWDSV bmy_06565T0/1-700 QRQRHYLGHN DDIKCLAVHP DMVTIATGQV AGTTKEGKPV PPHVRVWDSV BACU002116/1-811 QRQRHYLGHN DDIKCLAVHP DMVTVATGQV AGTTKEGKPL PPHVRVWDSV ENSBTAP00000020933/1-818 QRQRHYLGHN DDIKCLAVHP DMVTIATGQV AGTTKEGKPL PPHVRIWDSV ENSP00000468312/1-850 QRQRHYLGHN DDIKCLAIHP DMVTIATGQV AGTTKEGKPL PPHVRIWDSV 351 400 ENSTTRP00000013545/1-648 SLSTLHVLGL GVFDRAVCCV GFSKSNGGNL LCAVDESNDH MLSVWDWAKE bmy_06565T0/1-700 SLSTLHVLGL GVFDRAVCCV GFSKSNGGNL LCAVDESNDH MLSVWDWAKE BACU002116/1-811 SLSTLHVLGL GVFDRAVCCV GFSKSNGGNL LCAVDESNDH MLSVWDWAKE ENSBTAP00000020933/1-818 SLSTLHVLGL GVFDRAVCCV GFSKSNGGNL LCAVDESNDH VLSVWDWAKE ENSP00000468312/1-850 SLSTLHVLGL GVFDRAVCCV GFSKSNGGNL LCAVDESNDH MLSVWDWAKE 401 450 ENSTTRP00000013545/1-648 TKVVDVKXXX XXXXXXXXXX XXXXXXXXCG -SHIYFWNLE GGGMSKRQGL bmy_06565T0/1-700 TKVVDGKCSN EAVLVATFHP TDPTVLITCG KSHIYFWNLE GGGLSKRQGL BACU002116/1-811 TKVVDIKCSN EAVLVATFHP TDPTVLITCG KSHIYFWNLE GGGLSKRQGL ENSBTAP00000020933/1-818 TKVVDVKCSN EAVLVATFHP TDPTVLITCG KSHVYFWNLE GGSLSKRQGL ENSP00000468312/1-850 TKVVDVKCSN EAVLVATFHP TDPTVLITCG KSHIYFWTLE GGSLSKRQGL 451 500 ENSTTRP00000013545/1-648 FEKHEKPKYV LCVTFLEGGD VVTGDSGGNL YVWGKGGNRI TQALLGVHDG bmy_06565T0/1-700 FEKHEKPKYV LCVTFLEGGD VVTGDSGGNL YVWGKGGNRI TQAVLGAHDG BACU002116/1-811 FEKHEKPKYV LCVTFLEGGD VVTGDSGGNL YVWGKGGNRI TQAVLGAHDG ENSBTAP00000020933/1-818 FEKYEKPKYV LCVTFLEGGD VVTGDSGGNL YVWGKGGNRI TQAVLGAHDG ENSP00000468312/1-850 FEKHEKPKYV LCVTFLEGGD VVTGDSGGNL YVWGKGGNRI TQAVLGAHDG 501 550 ENSTTRP00000013545/1-648 GVFGLCALRD GTLVSGGGRD RRVILWGSDY SKLQEAEVPE DFGPVRTIAE bmy_06565T0/1-700 GVFGLCALRD GTLVSGGGRD RRVILWGPDY SKLQEAEVPE DFGPVRTVAE BACU002116/1-811 GVFGLCALRD GTLVSGGGRD RRVILWGPDY SKLQEAEVPE DFGPVRTVAE ENSBTAP00000020933/1-818 GVFGLCALRD GTLVSGGGRD RRVVLWGSDY SKLQEVEVPE DFGPVRTVAE ENSP00000468312/1-850 GVFGLCALRD GTLVSGGGRD RRVVLWGSDY SKLQEVEVPE DFGPVRTVAE 551 600 ENSTTRP00000013545/1-648 GRGDTLYVGT TRNSILQGSV HTGFSLLIQG HVEELWGLAT HPSRGQFVTC bmy_06565T0/1-700 GRGDTLYVGT TRNSILQGSV HTGFSLLIQ- ---------- ---------- BACU002116/1-811 GRGDTLYVGT TRNSILQGSV HTGFSLLIQG HVEELWGLAT HPSREQFVTC ENSBTAP00000020933/1-818 GRGDTLYVGT TRNSILQGSV HTGFSLLVQG HMEELWGLAT HPSRAQFVTC ENSP00000468312/1-850 GHGDTLYVGT TRNSILQGSV HTGFSLLVQG HVEELWGLAT HPSRAQFVTC 601 650 ENSTTRP00000013545/1-648 GQDKLVHLWS VESHQPLWSR IIEDPAYSAG FHPSGCVLAI GTATGRWLLL bmy_06565T0/1-700 ---------- ---------- ---DPAHSAG FHPSGSVLAI GTVTGRWLLL BACU002116/1-811 GQDKLVHLWS VESHQPLWSR IIEDPAHSAG FHPSGSVLAI GTVTGRWLLL ENSBTAP00000020933/1-818 GQDKLVHLWS VESHQPLWSR TIEDPARSAG FHPSGSVLAI GTVTGRWLLL ENSP00000468312/1-850 GQDKLVHLWS SDSHQPLWSR IIEDPARSAG FHPSGSVLAV GTVTGRWLLL 651 700 ENSTTRP00000013545/1-648 DTETHDLVAI HTDGNEQISV VSFSPDGAYL AVGSHDNLVY LYTVDQGGRK bmy_06565T0/1-700 DTETHDLVAI HTDGNEQISV VSFSPDGAYL AVGSHDNLVY LYTVDQGGRK BACU002116/1-811 DTETHDLVAI HTDGNEQISV VSFSPDGAYL AVGSHDNLVY LYTVDQGGRK ENSBTAP00000020933/1-818 DTETHDLVAI HTDGNEQISV VSFSPDGAYL AVGSHDNLVY VYTVDQGGRK ENSP00000468312/1-850 DTETHDLVAI HTDGNEQISV VSFSPDGAYL AVGSHDNLVY VYTVDQGGRK 701 750 ENSTTRP00000013545/1-648 VSRLGKCSGH SSFITHLDWA QDSSCFVTNS GDYEILYWDP ATCKQIITAD bmy_06565T0/1-700 VSRLGKCSGH SSFITHLDWA QDSSCFVTNS GDYEILYW-- ---------- BACU002116/1-811 VSRLGKCSGH SSFITHLDWA QDSSCFVTNS GDYEILYWDP ATCKQITTAD ENSBTAP00000020933/1-818 VSRLGKCSGH SSFITHLDWA QDSSCFVTNS GDYEILYWDS STCKQITTAE ENSP00000468312/1-850 VSRLGKCSGH SSFITHLDWA QDSSCFVTNS GDYEILYWDP ATCKQITSAD 751 800 ENSTTRP00000013545/1-648 AVRNVEWATA TCVLGFGVFG IWSEGADGTD INAVARSHDG KLLASADDFG bmy_06565T0/1-700 ---------- ---------- IWSEGADGTD INAVARSHDG KLLASADDFG BACU002116/1-811 AVRNVEWATA TCVLGFGVFG IWSEGADGTD INAVARSHDG KLLASADDFG ENSBTAP00000020933/1-818 TVRNVEWATA TCVLGFGVFG IWSEGADGTD INAVARSHDG KLLASADDFG ENSP00000468312/1-850 AVRNMEWATA TCVLGFGVFG IWSEGADGTD INAVARSHDG KLLASADDFG 801 850 ENSTTRP00000013545/1-648 KVHLFSYPCC QPRALSHKYG GHSSHVTNVA FLWDDSVALT TGGKDTSVLQ bmy_06565T0/1-700 KVHLFSYPCC QPRVLQNQL- ---------- ---------- ---------- BACU002116/1-811 KVHLFSYPCC QPRALSHKYG GHSSHVTNVA FLWDDSVALT TGGKDTSVLQ ENSBTAP00000020933/1-818 KVHLFSYPCC QPRALSHKYG GHSSHVTNVA FLWDDSMALT TGGKDTSVLQ ENSP00000468312/1-850 KVHLFSYPCC QPRALSHKYG GHSSHVTNVA FLWDDSMALT TGGKDTSVLQ 851 900 ENSTTRP00000013545/1-648 WRVV bmy_06565T0/1-700 ---- BACU002116/1-811 WRVV ENSBTAP00000020933/1-818 WRVV ENSP00000468312/1-850 WRVV