KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:03 2014 Check: 00 .. Name: ENSTTRP00000000141/1-811 Len: 819 Check: 7897 Weight: 1.00 Name: bmy_05753T0/1-789 Len: 819 Check: 9326 Weight: 1.00 Name: ENSP00000322242/1-811 Len: 819 Check: 4637 Weight: 1.00 Name: BACU010540/1-812 Len: 819 Check: 2847 Weight: 1.00 Name: ENSBTAP00000020937/1-810 Len: 819 Check: 4244 Weight: 1.00 // 1 50 ENSTTRP00000000141/1-811 MPQSSPSAAA TASDMDKNSG SSSSSASSGS SKGQQPTRSA SAGPAGESKP bmy_05753T0/1-789 MPQSSPSAAA TASDMDKNSG SSSSSASSGS SKGQQPPRSA SAGPAGESKP ENSP00000322242/1-811 MPLSSPNAAA TASDMDKNSG SNSSSASSGS SKGQQPPRSA SAGPAGESKP BACU010540/1-812 MPQSSPSAAA TASDMDKNSG SSSSSASSGS SKGQQPPRSA SAGPAGESKP ENSBTAP00000020937/1-810 MPQSSPSAAA TASDMDKNSG SSSSSASSGS SKGQQPPRSA SAGPAGESKP 51 100 ENSTTRP00000000141/1-811 KSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_05753T0/1-789 KSDGKNSSGA KRYNRKREPS YPKNENFINQ SRRSNSQKSK TFNKMPPQRG ENSP00000322242/1-811 KSDGKNSSGS KRYNRKRELS YPKNESFNNQ SRRSSSQKSK TFNKMPPQRG BACU010540/1-812 KSDGKNSSGS KRYNRKREPS YPKNENFINQ SRRSNSQKSK TFNKMPPQRG ENSBTAP00000020937/1-810 KSDGKNSSGS KRYNRKREPS YPKNENFINQ SRRSNSQKSK TFNKMPPQRG 101 150 ENSTTRP00000000141/1-811 XXXX--XXXX XXXXXXXXXX VAEAQRAEFS PAQFSGPKKI NLNHLLNFTF bmy_05753T0/1-789 GGSSNNKLFS SSFNGGRRDE VAEAQRAEFS PAQFSGPKKI NLNHLLNFTF ENSP00000322242/1-811 GGSS--KLFS SSFNGGRRDE VAEAQRAEFS PAQFSGPKKI NLNHLLNFTF BACU010540/1-812 GGSS-NKLFS SSFNGGRRDE VAEAQRAEFS PAQFSGPKKI NLNHLLNFTF ENSBTAP00000020937/1-810 GGSS--KLFS SSFNGGRRDE VAEAQRAEFS PAQFSGPKKI NLNHLLNFTF 151 200 ENSTTRP00000000141/1-811 EPRGQAGHFE GSGHGSWGKR NKWGHKPFNK ELFLQANCQF VVSEDQDYTV bmy_05753T0/1-789 EPRGQAGHFE GSGHGSWGRR NKWGHKPFNK ELFLQANCQF VVSEDQDYTV ENSP00000322242/1-811 EPRGQTGHFE GSGHGSWGKR NKWGHKPFNK ELFLQANCQF VVSEDQDYTA BACU010540/1-812 EPRGQAGHFE GSGHGSWGKR NKWGHKPFNK ELFLQANCQF VVSEDQDYTV ENSBTAP00000020937/1-810 EPRGQAGHFE GSGHGSWGKR NKWGHKPFNK ELFLQANCQF VVSEDQDYTV 201 250 ENSTTRP00000000141/1-811 HFADPDTLVN WDFVEQVRIC SHEVPSCPIC LYPPTAAKIT RCGHIFCWAC bmy_05753T0/1-789 HFADPDTLVN WDFVEQVRIC SHEVPSCPIC LYPPTAAKIT RCGHIFCWAC ENSP00000322242/1-811 HFADPDTLVN WDFVEQVRIC SHEVPSCPIC LYPPTAAKIT RCGHIFCWAC BACU010540/1-812 HFADPDTLVN WDFVEQVRIC SHEVPSCPIC LYPPTAAKIT RCGHIFCWAC ENSBTAP00000020937/1-810 HFADPDTLVN WDFVEQVRIC SHEVPSCPIC LYPPTAAKIT RCGHIFCWAC 251 300 ENSTTRP00000000141/1-811 ILHYLSLSEK TWSKCPICYS SVHKKDLKSV VATESHQYVV GDTITMQLMK bmy_05753T0/1-789 ILHYLSLSEK TWSKCPICYS SVHKKDLKSV VATESHQYVV GDTITMQLMK ENSP00000322242/1-811 ILHYLSLSEK TWSKCPICYS SVHKKDLKSV VATESHQYVV GDTITMQLMK BACU010540/1-812 ILHYLSLSEK TWSKCPICYS SVHKKDLKSV VATESHQYVV GDTITMQLMK ENSBTAP00000020937/1-810 ILHYLSLSEK TWSKCPICYS SVHKKDLKSV VATESRQYVV GDTITMQLMK 301 350 ENSTTRP00000000141/1-811 RQKGVLVALP KSKWMNVEHP IHLGDEQHSQ YSKLLLASKE QVLHRVVQEE bmy_05753T0/1-789 REKGVLVALP KSKWMNVEHP IHLG------ ---------- ---------V ENSP00000322242/1-811 REKGVLVALP KSKWMNVDHP IHLGDEQHSQ YSKLLLASKE QVLHRVVLEE BACU010540/1-812 REKGVLVALP KSKWMNVEHP IHLGDEQHSQ YSKLLLASKE QVLHRVVQEE ENSBTAP00000020937/1-810 REKGVLVALP KSKWMNVDHP IHLGDEQHSQ YSKLLLASKE QVLRRVVQEE 351 400 ENSTTRP00000000141/1-811 KAALEQQLAE EKHTPESCFX XXXXXXXXTR EEALSGLAES SGEVAGVVAA bmy_05753T0/1-789 RSICSSAFQG EEKLPRSRAV -----RVETR EEALSGLAES RGEVAGVVAA ENSP00000322242/1-811 KVALEQQLAE EKHTPESCFI EAAIQELKTR EEALSGLAGS RREVTGVVAA BACU010540/1-812 KAALEQQLAE EKHTPESCFI EAAIQELKTR EEALSGLAES RGEVAGVVAA ENSBTAP00000020937/1-810 KAALERQLAE EKHTPESCFI EAAIQELKAR EEALSGLAES RGEVPGVVAA 401 450 ENSTTRP00000000141/1-811 LEQLVLMAPL AKESVFQPRK GMLEYLSAFD EETTEVCSLG SPPRPLALPL bmy_05753T0/1-789 LEQLVLMAPL AKESVFQPRK GMLEYLSAFD EETTGVCSLG SPPRPLALPL ENSP00000322242/1-811 LEQLVLMAPL AKESVFQPRK GVLEYLSAFD EETTEVCSLD TPSRPLALPL BACU010540/1-812 LEQLVLMAPL AKESVFQPRK GMLEYLSAFD EETAGVCPLG SPPRPLALPL ENSBTAP00000020937/1-810 LEQRVLMAPL AKESVFQPRK GVLEYLSAFD EDATEVCSLG -PPHPVALPL 451 500 ENSTTRP00000000141/1-811 VEEEEAVSEP EPEGLSEACE DLELAEDNLG EGTICTESSQ QEPVTKPSIT bmy_05753T0/1-789 VEEEEAVSEP EPEGLSEACE DSELAEDNLG EGTICTESSQ QEPVTKPSIT ENSP00000322242/1-811 VEEEEAVSEP EPEGLPEACD DLELADDNLK EGTICTESSQ QEPITKSGFT BACU010540/1-812 VEEEEAVSEP EPEGLSEACE DSEIAEDNLG EGTICTESSQ QEPVTKPNIT ENSBTAP00000020937/1-810 VEEEETVSEP EPEGLSEACE DLELVEDNLG EGTICTESSQ QEPVSKPSVT 501 550 ENSTTRP00000000141/1-811 HLSSSPCYYF YQAEDGQHMF LHPVNVRCLV REYGSLEQSP EKISATVVEI bmy_05753T0/1-789 RLSSSPCYYF YQAEDGQHMF LHPVNVRCLV REYGSLEQSP EKISATVVEX ENSP00000322242/1-811 RLSSSPCYYF YQAEDGQHMF LHPVNVRCLV REYGSLERSP EKISATVVEI BACU010540/1-812 HLSSSPCYYF YQAEDGQHMF LHPVNVRCLV REYGSLEQSP EKISATVVEI ENSBTAP00000020937/1-810 HLSSSPCYYF YQAEDGQHMF LHPVNVRCLV REYGSLEQSP EKISATVVEI 551 600 ENSTTRP00000000141/1-811 AGYSMSEDVR QRHRYLSHLP LTCEFSICEL ALEPPLVSKE NLEIFSDDIE bmy_05753T0/1-789 AGYSMSEDVR QRHRYLSHLP LTCEFSICEL ALQPPLVSKE TLELFSDDIE ENSP00000322242/1-811 AGYSMSEDVR QRHRYLSHLP LTCEFSICEL ALQPPVVSKE TLEMFSDDIE BACU010540/1-812 AGYSMSEDVR QRHRYLSHLP LTCEFSICEL ALQPPLVSKE TLELFSDDIE ENSBTAP00000020937/1-810 SGYSMSEDMR QRHRYLSHLP LTCEFSICEL ALQPPLVSKE TLEIFSDDIE 601 650 ENSTTRP00000000141/1-811 KRKRQRQKKA REERRRERRI EMEENKKQGK YPEVHIPLEN LQQFPAFNSY bmy_05753T0/1-789 KRKRQRQKKA REERRRERRI EMEENKRQGK YPEVHIPLEN LQQFPAFNSY ENSP00000322242/1-811 KRKRQRQKKA REERRRERRI EIEENKKQGK YPEVHIPLEN LQQFPAFNSY BACU010540/1-812 KRKRQRQKKA REERRRERRI EMEENKRQGR YPEVHIPLEN LQQFPAFNSY ENSBTAP00000020937/1-810 KRKRQRQKKA REERRRERRI EMEENKKQGK YPEVHIPLEN LQQFPAFNSY 651 700 ENSTTRP00000000141/1-811 TCSSDSALGP TSTEGHGALS LSSLSRSPGS QADFLLTPLS PTASQGSSSF bmy_05753T0/1-789 TCSSDSALGP TSTEGHGALS LSPLSRSPGS QADFLLTPLS PTASQGSSSF ENSP00000322242/1-811 TCSSDSALGP TSTEGHGALS ISPLSRSPGS HADFLLTPLS PTASQGSPSF BACU010540/1-812 TCSSDSALGP TSTEGHGALS LSPLSRSPGS QADFLLTPLS PTASQGSSSF ENSBTAP00000020937/1-810 TCSSDSALGS TSTEGRGALS LSPLSRSPGS QADFLLTPLS PTASQGSPSF 701 750 ENSTTRP00000000141/1-811 CVGSLEEDSP FPSFAQMLRI GKAKADVWPK TAPKKGENSL GPPAPVDSDG bmy_05753T0/1-789 CVGSLEEDSP FPSFAQMLRI GKAKADVWPK TAPKKDENSL GPPAPVDSDG ENSP00000322242/1-811 CVGSLEEDSP FPSFAQMLRV GKAKADVWPK TAPKKDENSL VPPAPVDSDG BACU010540/1-812 CVGSLEEDSP FPSFAQMLRI GKAKADVWPK TAPKKDENSL GPPAPVDSDG ENSBTAP00000020937/1-810 CVGSLEEDSP FPSFAQMLRV GKAKADVWPK TAPKKDENTL GPPAPVDSDG 751 800 ENSTTRP00000000141/1-811 ESDNSDRVPV PSFQNSFSQA IEAAFMKLDT PATSDPLSEE KGGKKRKKQK bmy_05753T0/1-789 ESDNSDRVPV PSFQNSFSQA IEAAFMKLDT PATSDPLSGK GTEVGCSAQG ENSP00000322242/1-811 ESDNSDRVPV PSFQNSFSQA IEAAFMKLDT PATSDPLSEE KGGKKRKKQK BACU010540/1-812 ESDNSDRVPV PSFQNSFSQA IEAAFMKLDT PATSDPLSEE KGGKKRKKQK ENSBTAP00000020937/1-810 ESDNSDRVPV PSFQNSFSQA IEAAFMKLDT PVTSDPLSEE KGGKKRKKQK 801 850 ENSTTRP00000000141/1-811 QKLLFS---- -TSVVHTK- bmy_05753T0/1-789 CHSLLDPVAD ITNQLHFSL ENSP00000322242/1-811 QKLLFS---- -TSVVHTK- BACU010540/1-812 QKLLFS---- -TSVVHTK- ENSBTAP00000020937/1-810 QKLLFS---- -TSVVHTK-