KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:03 2014 Check: 00 .. Name: ENSTTRP00000005683/1-399 Len: 399 Check: 2642 Weight: 1.00 Name: ENSP00000363869/1-399 Len: 399 Check: 969 Weight: 1.00 Name: ENSBTAP00000020939/1-305 Len: 399 Check: 6578 Weight: 1.00 Name: bmy_16018T0/1-212 Len: 399 Check: 6918 Weight: 1.00 Name: BACU013757/1-399 Len: 399 Check: 4562 Weight: 1.00 // 1 50 ENSTTRP00000005683/1-399 MELLLGLLLL RHLLVVTYGH PILKVPESVT GPWKGDVNIP CTYGPLQGYT ENSP00000363869/1-399 MGILLGLLLL GHLTVDTYGR PILEVPESVT GPWKGDVNLP CTYDPLQGYT ENSBTAP00000020939/1-305 MGLLLGLLLL SHLLVVIYGH PILEVPESVT GPWKGDVNIP CTYGPLQGYT bmy_16018T0/1-212 ---------- ---------H PILKVPESVA GPWKGDVNIP CTYGPLQGYT BACU013757/1-399 MGLLLGLLLL SHLLVVTYGH PILKVPESVT GPWKGDVNIP CTYGPLQGYT 51 100 ENSTTRP00000005683/1-399 QVLVKWLVER GSDPVTIFLR DASGDHIQQA KYRGRLHVND KVPGDVSLQL ENSP00000363869/1-399 QVLVKWLVQR GSDPVTIFLR DSSGDHIQQA KYQGRLHVSH KVPGDVSLQL ENSBTAP00000020939/1-305 QVLVKWLVER GSDSVTIFLR DPSGDHIQQA KYRGRLHVNH EVPGDVSLQL bmy_16018T0/1-212 QVLVKWLVER GSGPVTIFLR DSSGDHIQQA KYRGRLHVNH KVPGDVSLQL BACU013757/1-399 QVLVKWLVER GSGPVTIFLR DSSGDHIQQA KYRGRLHVNH KVPGDVSLQL 101 150 ENSTTRP00000005683/1-399 NTLEMDDRSH YTCEVTWQTP NGKQVVRDKI IELRVQKXXX XXXXXXXXXX ENSP00000363869/1-399 STLEMDDRSH YTCEVTWQTP DGNQVVRDKI TELRVQKLSV SKPTVTTGSG ENSBTAP00000020939/1-305 NTLEMDDRSH YTCEVTWQTP DGNQVVRDKI VELRVQKHS- SKP------- bmy_16018T0/1-212 NTLEMDDRSH YTCEVTWQTP DGNQVVRNKI IELRVQKLSV SKPTVTTGSD BACU013757/1-399 NTLEMDDRSH YTCEVTWQTP DGNQVVRNKI IELRVQKLSV SKPTVTTGSD 151 200 ENSTTRP00000005683/1-399 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000363869/1-399 YGFTVPQGMR ISLQCQARGS PPISYIWYKQ QTNNQEPIKV ATLSTLLFKP ENSBTAP00000020939/1-305 ---------- --LETKTKSL P--------- ---------- ---------- bmy_16018T0/1-212 YGFIVPQGMR ISLQCQARGS PPISYVWYKE QTNNQEPIKV GVLSTLLFKP BACU013757/1-399 YGFMVPQGMR ISLQCQARGS PPISYVWYKE QTNNQEPIKV GVLSTLLFKP 201 250 ENSTTRP00000005683/1-399 XXXXXXXXXX XXXXXXXXXX XXSDTVKFVV KDSSKPLETK TKAPPTMQSP ENSP00000363869/1-399 AVIADSGSYF CTAKGQVGSE QHSDIVKFVV KDSSKLLKTK TEAPTTMTYP ENSBTAP00000020939/1-305 ---------- ---------- ---------- ---------- -----TMQTP bmy_16018T0/1-212 AVVTDSGSYF CTAKGRLGSE QHSDTVKFVV K--------- ---------- BACU013757/1-399 AVVTDSGSYF CTAKGRLGSE QHSDTVKFVV KDSSKPLESK TKAPPTMQSP 251 300 ENSTTRP00000005683/1-399 FEATSTVNSS QGWITEVDGY VGKTSAGPGN GLPIFAIILI ISFCCIVVTT ENSP00000363869/1-399 LKATSTVKQS WDWTTDMDGY LGETSAGPGK SLPVFAIILI ISLCCMVVFT ENSBTAP00000020939/1-305 LEATYTVNIS WGRITEMDGD IGKTSAGPGK GLSIFAIILI ISLCCIVFIT bmy_16018T0/1-212 ---------- ---------- ---------- ---------- ---------- BACU013757/1-399 FEATSTVNSS QGWTTEVDGY VGKTSAGPGN GLPIFAIILI ISFCCIVVTT 301 350 ENSTTRP00000005683/1-399 MTYIMVCRKT SQQEHVCEVV RVHAGEASDS GETMRVAIFT SGCSSEEPAS ENSP00000363869/1-399 MAYIMLCRKT SQQEHVYEAA RAHAREANDS GETMRVAIFA SGCSSDEPTS ENSBTAP00000020939/1-305 MTYIMVCRKT SQQDHVYEVA RFHAREASDS GETMRVALFT SGCSDEEPAS bmy_16018T0/1-212 ---------- ---------- ---------- ---------- ---------- BACU013757/1-399 MTYIMVCRKT SQQEHVCEVA RVHAEEASDP GETMRVAIFT SGCSSEEPAS 351 400 ENSTTRP00000005683/1-399 QTLDNDYSDE PCLGQEYQII AQINGDYAHL LHTVPPDYEL LVTKGKSSC ENSP00000363869/1-399 QNLGNNYSDE PCIGQEYQII AQINGNYARL LDTVPLDYEF LATEGKSVC ENSBTAP00000020939/1-305 QTLGNDYSDE PCLGQEYQII TQINSDYAHL LHTDSLDYEL LATKVKNVC bmy_16018T0/1-212 ---------- ---------- ---------- ---------- --------- BACU013757/1-399 QTLDNDYSDE PCLGQEYQII AQINGDYARL LHTVPPDYEL LVTKGKSSC