KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:06 2014 Check: 00 .. Name: ENSTTRP00000014496/1-631 Len: 657 Check: 2482 Weight: 1.00 Name: ENSP00000287482/1-657 Len: 657 Check: 1599 Weight: 1.00 Name: ENSBTAP00000020951/1-657 Len: 657 Check: 4925 Weight: 1.00 Name: bmy_16162T0/1-335 Len: 657 Check: 398 Weight: 1.00 Name: BACU002779/1-574 Len: 657 Check: 403 Weight: 1.00 // 1 50 ENSTTRP00000014496/1-631 ---------- ---------- --RVSIRLSI ELQSVSNPVH RKDLVIRLTD ENSP00000287482/1-657 MSQVLFHQLV PLQVKCKDCE ERRVSIRMSI ELQSVSNPVH RKDLVIRLTD ENSBTAP00000020951/1-657 MSQILFQQLV PLQVKCRDCE ERRVSIRLSI ELQSVSNPVH RKDLVIRLTD bmy_16162T0/1-335 ---------- ---------- ---------- ---------- ---------- BACU002779/1-574 ---------- ---MKCKDCE ---------- ---------- ---------- 51 100 ENSTTRP00000014496/1-631 DTDPFFLYNL VISEEDFQSL KFQQGLLIDF SAFPQKFIDL LQQCTQEHAK ENSP00000287482/1-657 DTDPFFLYNL VISEEDFQSL KFQQGLLVDF LAFPQKFIDL LQQCTQEHAK ENSBTAP00000020951/1-657 DADPFFLYNL VISEEDFQSL KFQQGLLVDF LAFPQKFIDL LQQCTQEYAK bmy_16162T0/1-335 ---------- ---------- ---------- ---------- ---------- BACU002779/1-574 ---------- -------DSL KLQQGLLIDF SAFPQKFIDL LQQCTQEHAK 101 150 ENSTTRP00000014496/1-631 EIPRFLLQLV SPEAILDNSP AFLNVVETNP FKHLTHLSLK LLPGNDVEIK ENSP00000287482/1-657 EIPRFLLQLV SPAAILDNSP AFLNVVETNP FKHLTHLSLK LLPGNDVEIK ENSBTAP00000020951/1-657 EIPRFLLQLV STEAILDNSP ALLNVVETNP FKHLTHLSLK LLPGNDVEIK bmy_16162T0/1-335 ---------- ---------- ---------- ---------- ---------- BACU002779/1-574 EIPRFLLQLV SPEAILDSSP AFLNVVETNP FKHLTHLSLK LLPGNDVEIK 151 200 ENSTTRP00000014496/1-631 KFLADCLKCS KEEKLSLTQS LDDVTRQLNF TQKTLSEKIQ ELDKLRNEWA ENSP00000287482/1-657 KFLAGCLKCS KEEKLSLMQS LDDATKQLDF TRKTLAEKKQ ELDKLRNEWA ENSBTAP00000020951/1-657 KFLADCLKCS KEEKLSLTQS LDDVTRQLNF TQKTLSEKIQ ELDKLRNEWA bmy_16162T0/1-335 ---------- ---------- ---------- ---------- ---------- BACU002779/1-574 KFLADCLKCS ---------- ---------- --KTLSEKIQ ELDKLRNEWA 201 250 ENSTTRP00000014496/1-631 SHTATLSNKH SQELTNEKEK ALQAQVRYQQ QHEQQKKDLE ILHQRNVQQL ENSP00000287482/1-657 SHTAALTNKH SQELTNEKEK ALQAQVQYQQ QHEQQKKDLE ILHQQNIHQL ENSBTAP00000020951/1-657 SHTATLSNKH SQELTNEKEK ALQAQVQYQQ QHEQQKKDLE ILHQRNMQQL bmy_16162T0/1-335 ---------- ---------- ---AQVRYQQ QHEQQKKDLE ILHQRNIQQL BACU002779/1-574 SHTATLSNKH SQELTNEKEK ALQAQVRYQQ QHEQQKKDLE ILHQRNIQQL 251 300 ENSTTRP00000014496/1-631 -NRLSELKSA NKDLTEXXXX XXXXXXXXXX XXXXXXXELQ RAKQEVLSLR ENSP00000287482/1-657 QNRLSELEAA NKDLTERKYK GDSTIRELKA KLSGVEEELQ RTKQEVLSLR ENSBTAP00000020951/1-657 QNRLSELETA NKDLTERKYK GDSTIRELKA KLSGVEEELQ RAKQEVLSLR bmy_16162T0/1-335 QNRLSELESA NKDLTERKYK GDSTIRELKT KLSGVEEELQ RAKQEVLSLR BACU002779/1-574 QNRLSELESA NKDLTERKYK GDSTVRELKT KLSGVEEELQ RAKQEVLSLR 301 350 ENSTTRP00000014496/1-631 RENSTLDAEC HEKEKHINHL QTKVAVLEQE IKDKDQLVLR TKEAFDTIQE ENSP00000287482/1-657 RENSTLDVEC HEKEKHVNQL QTKVAVLEQE IKDKDQLVLR TKEAFDTIQE ENSBTAP00000020951/1-657 RENSTLDAEC HEKEKHINQL QTKVAVLEQE IKDKDQLVLR TKEAFDTIQE bmy_16162T0/1-335 RENSTLDAEC HEKEKHINQL QTKVAVLDQE IKDKDQLVLR TKEVFDTIQE BACU002779/1-574 RENSTLDAEC HEKEKHINQL QTKVAVLEQE IKDKDQLVLR TKEAFDTIQE 351 400 ENSTTRP00000014496/1-631 QKVALEENGE KNQVQLGKLE ATIKSLSAEL LKANEIIKKL QGDLKTLMGK ENSP00000287482/1-657 QKVVLEENGE KNQVQLGKLE ATIKSLSAEL LKANEIIKKL QGDLKTLMGK ENSBTAP00000020951/1-657 QKVALEENGE KNQVQLGKLE ATIKSLSAEL LKANEIIKKL QGDLKTLMGK bmy_16162T0/1-335 QKVALEENGE KNQVQLGKLE ATIKSLSAEL LKANEIIKKL QGDLKTLMGK BACU002779/1-574 QKVALEENGE KNQVQLGKLE ATIKSLSAEL LKANEIIKKL QGDLKTLMGK 401 450 ENSTTRP00000014496/1-631 LKLKNTVTIQ QEKLLAEKEE KLQKEQKELQ DVVQSLRIKE QEVCKLQEKL ENSP00000287482/1-657 LKLKNTVTIQ QEKLLAEKEE KLQKEQKELQ DVGQSLRIKE QEVCKLQEQL ENSBTAP00000020951/1-657 LKLKNTVTIQ QEKLLAEKEE KLQKEQKELQ DVGQSLRIKE QEVCKLQEQL bmy_16162T0/1-335 LKLKNTVTIQ QEKLLAEKEE KLQKEQKELQ DVGQSLRIKE QEVCKLQEQL BACU002779/1-574 LKLKNTVTIQ QEKLLAEKEE KLQKEQKELQ DVGQSLRIKE QEVCKLQEQL 451 500 ENSTTRP00000014496/1-631 EATVQKLEES KQLLKNNEKX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000287482/1-657 EATVKKLEES KQLLKNNEKL ITWLNKELNE NQLVRKQDVL GPSTTPPAHS ENSBTAP00000020951/1-657 EATVQKLEES KQLLKNNEKL ITWLNKELNE NQLVRKQDVL GPSTTPPVHS bmy_16162T0/1-335 EATVQKLEES KQLLKNNEKL ITWLNKELNE NQLVRKQDVL GPSTTPPVHS BACU002779/1-574 EATVQKLEES KQLLKNNEKL ITWLNKELNE NQLVRKQDVL GPSATPPVHS 501 550 ENSTTRP00000014496/1-631 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000287482/1-657 SSNTIRSGIS PNLNVVDGRL TYPTCGIGYP VSSAFAFQNT FPHSISAKNT ENSBTAP00000020951/1-657 SSNTIRSGIS PTSNVVEGRL TYPACGIGYP VSSAFAFQNT FSHPISAKNS bmy_16162T0/1-335 SINTIRSGIS PNSNVVESRL TYPTCGIGYP VSSAFAFQNT FPHPIAAKNT BACU002779/1-574 SINTIRSGIS PNSNVLESRL TYPTCGIGYP VSSAFAFQNT FPHPIAAKNT 551 600 ENSTTRP00000014496/1-631 XXXXXXXXVQ FNLQFPKPST SLGDVQSGTT VSMPCSTDKE XXXXXXXXXX ENSP00000287482/1-657 SHPGSGTKVQ FNLQFTKPNA SLGDVQSGAT ISMPCSTDKE NGENVGLESK ENSBTAP00000020951/1-657 IHTVSGPKVQ FNLQFTKPNP SLGDVQSGTT ISMPCSTDKE NGENLGLESI bmy_16162T0/1-335 IHPVSGPK-- ---------- ---------- ---------- ---------- BACU002779/1-574 IHPVSGPKVQ FNLQFTKPST SLGDVQSGTT VSMPCSTDKE NGENLGLEYK 601 650 ENSTTRP00000014496/1-631 XXXXXXXXXX XXXXXXXXXX XXXHQKDGT- GALQTSSK-- VVLSTSSAYF ENSP00000287482/1-657 YLKKREDSIP LRGLSQNLFS NSDHQRDGTL GALHTSSKPT ALPSASSAYF ENSBTAP00000020951/1-657 YLKKREDSIP LRGLSQNLFN NPDHQKDGTL GALQTSSKLT VLPSASSAYF bmy_16162T0/1-335 ---------- ---------- ---------- ---------- ---------- BACU002779/1-574 YLKKREDSIP LRGLNQNLFN NPDHQKDGT- LALQTSSKPA VLPSASSAYF 651 700 ENSTTRP00000014496/1-631 PGQLPNS ENSP00000287482/1-657 PGQLPNS ENSBTAP00000020951/1-657 PGQLQNS bmy_16162T0/1-335 ------- BACU002779/1-574 PGQLPNS