KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:13:07 2014 Check: 00 .. Name: ENSTTRP00000014503/1-405 Len: 489 Check: 3277 Weight: 1.00 Name: ENSBTAP00000020955/1-481 Len: 489 Check: 9332 Weight: 1.00 Name: bmy_16164T0/1-256 Len: 489 Check: 8288 Weight: 1.00 Name: ENSP00000359160/1-481 Len: 489 Check: 1660 Weight: 1.00 // 1 50 ENSTTRP00000014503/1-405 ---------- -GFPAEGRCG YYVEKKKRFC RMVVAAGKRF CGEHAGAAEE ENSBTAP00000020955/1-481 MAAAALTPHG TVFPEEGRCG YFVEKKKRFC RMVVAAGKRF CGEHAGASEE bmy_16164T0/1-256 MAASAPTPHG TGFPAEGRCG YYVEKKKRFC RMVVAAGKRF CGEHAGAAEE ENSP00000359160/1-481 MATSATSPHA PGFPAEGRCG YYVEKKKRFC RMVVAAGKRF CGEHAGAAEE 51 100 ENSTTRP00000014503/1-405 ENARKRILCP LDPKHTVYED QLAKHLKKCN SREKPKPXXX XXXXXXXXXX ENSBTAP00000020955/1-481 ENARKRILCP LDPKHTVYED RLAKHLKKCN SREKPKPDFF IQDINAGLKD bmy_16164T0/1-256 ENARKRILCP LDPKHTVYED QLAKHLKKCN SREKPKP--- ---------- ENSP00000359160/1-481 EDARKRILCP LDPKHTVYED QLAKHLKKCN SREKPKPDFY IQDINAGLRD 101 150 ENSTTRP00000014503/1-405 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX X--------X XXXXXXXXXX ENSBTAP00000020955/1-481 ETEIPDQLVP ISSLSEEQLE NLIKKLRKAS E--------G LNCTLKDQIM bmy_16164T0/1-256 ---------- ---------- ----KLRKAS EAFVLLFGTG LNSTLKDQIM ENSP00000359160/1-481 ETEIPEQLVP ISSLSEEQLE KLIKKLRKAS E--------G LNSTLKDHIM 151 200 ENSTTRP00000014503/1-405 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000020955/1-481 SHPALHDALN DPKNGDSAAK HLKQQASILG NIENLKLLGP RRCFVEFGAG bmy_16164T0/1-256 SHPALHDALN DPKNGDSATK HLKQQ----- ------LLGP RRCFVEFGAG ENSP00000359160/1-481 SHPALHDALN DPKNGDSATK HLKQQASILG NIENLKLLGP RRCFVEFGAG 201 250 ENSTTRP00000014503/1-405 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000020955/1-481 KGKLSHWVDI ALKDAEKVHF ILVEKVTTRF KVDGKHRKKN SVFERLQIDI bmy_16164T0/1-256 KGKLSHWVDI ALKDAEKVHF ILVEKVTTRF KVS------- ---------- ENSP00000359160/1-481 KGKLSHWVDI ALKDAEKVHF ILVEKVTTRF KVDGKHRKKN SVFERLQIDI 251 300 ENSTTRP00000014503/1-405 XXXXXXKIPL LSKEKLPVVG IGKHLCGVAT DLALRCLVET YAASCEERNE ENSBTAP00000020955/1-481 QHLCLNKIPL LSKEKLPIVG IGKHLCGVAT DLALRCLVET YAASCEERNE bmy_16164T0/1-256 ---------- ---------- ---------- ---------- ---------- ENSP00000359160/1-481 QHLCLNKIPV LREEKLPVVG IGKHLCGMAT DLALRCLVET YAASFEERNE 301 350 ENSTTRP00000014503/1-405 EPLAKRVKND KTEKEINTLA KEGNEKNIPE KWTPVAGIVI ALCCHHRCDW ENSBTAP00000020955/1-481 EPLAKRIKND KTEKEINTLA KEGNEKNIPE KWTPVAGIVI ALCCHHRCDW bmy_16164T0/1-256 ---------- ---------- ---------- ---------- ---------- ENSP00000359160/1-481 EPLAKRIKND KTEKEIYTLA KEGNEKNVPE KWNPVAGIVI ALCCHHRCDW 351 400 ENSTTRP00000014503/1-405 RHYVGKEYFR ALGLGAVEFH YFQRMSSWAT CGMQKTSLEA SNISTKRKDK ENSBTAP00000020955/1-481 RHYVGKEYFR ALGLGAVDFH YFQRMSSWAT CGMRKTTLEA SNSSTKRRDK bmy_16164T0/1-256 ---------- ----ETIVVY WF-------- ---------- ---------- ENSP00000359160/1-481 RHYVGKEYFR ALGLGAVEFH YFQRMSSWAT CGMRKTSLET SNSTTKRQDN 401 450 ENSTTRP00000014503/1-405 QNDGSEEHDD GGYRITDDST ESLP------ ---------- ---------- ENSBTAP00000020955/1-481 QNDGSEEHDD GGCRITDDSP ESLPGFLTGE EKKKIGHLCK LLIDQGRIKY bmy_16164T0/1-256 ---------- ---------- ------LTVE EKKKIGHLCK LLIDQGRINY ENSP00000359160/1-481 QNDDSEEHDD GGYRITDDGA DCLPGLLSVE EKKKIGHLCK LLIDQGRIQY 451 500 ENSTTRP00000014503/1-405 ---------- ---------- ---------- --------- ENSBTAP00000020955/1-481 LQQKGFSPAL QYYTDPLVSL ENVLLTALPN HSSSPETSA bmy_16164T0/1-256 LQQKGFXPAL QYYTDPLVSL ENVLLTALPN HSSSPETTA ENSP00000359160/1-481 LQQKGFSPAL QYYTDPLVSL ENVLLTALPN HSSSPETTA