KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:08 2014 Check: 00 .. Name: ENSP00000265565/1-1279 Len: 1280 Check: 5490 Weight: 1.00 Name: ENSBTAP00000020961/1-1278 Len: 1280 Check: 7336 Weight: 1.00 Name: ENSTTRP00000002144/1-1280 Len: 1280 Check: 3148 Weight: 1.00 Name: bmy_05612T0/1-1280 Len: 1280 Check: 3311 Weight: 1.00 Name: BACU002433/1-1280 Len: 1280 Check: 2137 Weight: 1.00 // 1 50 ENSP00000265565/1-1279 MTLTERLREK ISRAFYNHGL LCASYPIPII LFTGFCILAC CYPLLKLPLP ENSBTAP00000020961/1-1278 MTLTERLREK ISQAFYNHGL FCASYPIPII LFTGLCILAC CYPLLKLPLP ENSTTRP00000002144/1-1280 MTLTERLREK ISQAFYNHGL FCASYPIPII LFTGLCILAC CYPLLKLPLP bmy_05612T0/1-1280 MTLTERLREK ISQAFYNHGL FCASYPIPII LFTGLCILAC CYPLLKLPLP BACU002433/1-1280 MTLTERLREK ISQAFYNHGL FCASYPIPII LFTGLCILAC CYPLLKLPLP 51 100 ENSP00000265565/1-1279 GTGPVEFTTP VKDYSPPPVD SDRKQGEPTE QPEWYVGAPV AYVQQIFVKS ENSBTAP00000020961/1-1278 GTGPVEFTTP VKDYSPPPLT SDHKPGEPNE QPEWYVGAPV AYIQQIFVKS ENSTTRP00000002144/1-1280 GTGPVEFTTP VKDYSPPPVA SDHKPEEPNE QPEWYVGAPV AYIQQIFVKS bmy_05612T0/1-1280 GTGPVEFTTP VKDYSPPPVA SDHKPEEPNE QPEWYVGAPV AYIQQIFVKS BACU002433/1-1280 GTGPVEFTTP VKDYSPPPVA SDHKPEEPNE QPEWYVGAPV AYIQQIFVKS 101 150 ENSP00000265565/1-1279 SVFPWHKNLL AVDVFRSPLS RAFQLVEEIR NHVLRDSSGI RSLEELCLQV ENSBTAP00000020961/1-1278 SVSPWHKNLL AVDVFRSPLS RAFQLVEEIR NHVLKDSSGT RSLEDVCLQV ENSTTRP00000002144/1-1280 SVSPWHKNLL AVDVFRSPLS RAFQLVEEIR NHVLRDSSGT RSLEEVCLQV bmy_05612T0/1-1280 SVSPWHKNLL AVDVFRSPLS RAFQLVEEIR NHVLRDSSGT RSLEEVCLQV BACU002433/1-1280 SVSPWHKNLL AVDVFRSPLS RAFQLVEEIR NHVLRDSSGT RSLEEVCLQV 151 200 ENSP00000265565/1-1279 TDLLPGLRKL RNLLPEHGCL LLSPGNFWQN DWERFHADPD IIGTIHQHEP ENSBTAP00000020961/1-1278 TDLLPGLRKL RNLLPEHGCL LLSPGNFWQN DRERFHADPD IIRTIHQHEP ENSTTRP00000002144/1-1280 TDLLPGLRKL RNLLPEHGCL LLSPGNFWQN DREHFHADPD IIGTIHQHEP bmy_05612T0/1-1280 TDLLPGLRKL RNLLPEHGCL LLSPGNFWQN DREHFHADPD IIGTIHQHEP BACU002433/1-1280 TDLLPGLRKL RNLLPEHGCL LLSPGNFWQN DREHFHADPD IIGTIHQHEP 201 250 ENSP00000265565/1-1279 KTLQTSATLK DLLFGVPGKY SGVSLYTRKR MVSYTITLVF QHYHAKFLGS ENSBTAP00000020961/1-1278 KTLQTSATLK DLLFGVPGKY SGVSLYTRKR LVSYTITLVF QHYHAKFLGS ENSTTRP00000002144/1-1280 KTLQTSATLK DLLFGVPGKY SGVSLYTRKR LVSYTITLVF QHYDARFLGS bmy_05612T0/1-1280 KTLQTSATLK DLLFGVPGKY SGVSLYTRKR LVSYTITLVF QHYDAKFLGS BACU002433/1-1280 KTLQTSATLK DLLFGVPGKY SGVSLYTRKR LVSYTITLVF QHYDAKFLGS 251 300 ENSP00000265565/1-1279 LRARLMLLHP SPNCSLRAES LVHVHFKEEI GVAELIPLVT TYIILFAYIY ENSBTAP00000020961/1-1278 LRARLMLLHP SPNCSLRAES LVHVHFKEEI GIAELIPLVT TYIILFAYIY ENSTTRP00000002144/1-1280 LRARLMLLHP SPNCSLRAES LVHVHFKEEI GIAELIPLVT TYIILFAYIY bmy_05612T0/1-1280 LRARLMLLHP SPNCSLRAES LVHVHFKEEI GIAELIPLVT TYIILFAYIY BACU002433/1-1280 LRARLMLLHP SPNCSLRAES LVHVHFKEEI GIAELIPLVT TYIILFAYIY 301 350 ENSP00000265565/1-1279 FSTRKIDMVK SKWGLALAAV VTVLSSLLMS VGLCTLFGLT PTLNGGEIFP ENSBTAP00000020961/1-1278 FSTRKIDMVK SKWGLALAAV VTVLSSLLMS VGLCTLFGLT PTLNGGEIFP ENSTTRP00000002144/1-1280 FSTRKIDMVK SKWGLALAAV VTVLSSLLMS VGLCTLFGLT PTLNGGEIFP bmy_05612T0/1-1280 FSTRKIDMVK SKWGLALAAV VTVLSSLLMS VGLCTLFGLT PTLNGGEIFP BACU002433/1-1280 FSTRKIDMVK SKWGLALAAV VTVLSSLLMS VGLCTLFGLT PTLNGGEIFP 351 400 ENSP00000265565/1-1279 YLVVVIGLEN VLVLTKSVVS TPVDLEVKLR IAQGLSSESW SIMKNMATEL ENSBTAP00000020961/1-1278 YLVVVIGLEN VLVLTKSVVS TPVDLEVKLR IAQGLSSESW SIMKNMATEL ENSTTRP00000002144/1-1280 YLVVVIGLEN VLVLTKSVVS TPVDLEVKLR IAQGLSNESW SIMKNMATEL bmy_05612T0/1-1280 YLVVVIGLEN VLVLTKSVVS TPVDLEVKLR IAQGLSNESW SIMKNMATEL BACU002433/1-1280 YLVVVIGLEN VLVLTKSVVS TPVDLEVKLR IAQGLSNESW SIMKNMATEL 401 450 ENSP00000265565/1-1279 GIILIGYFTL VPAIQEFCLF AVVGLVSDFF LQMLFFTTVL SIDIRRMELA ENSBTAP00000020961/1-1278 GIVLIGYFTL VPAIQEFCLF AVVGLVSDFF LQMLFFTTVL SIDIRRMELA ENSTTRP00000002144/1-1280 GIILIGYFTL VPAIQEFCLF AVVGLVSDFF LQMLFFTTVL SIDIRRMELA bmy_05612T0/1-1280 GIILIGYFTL VPAIQEFCLF AVVGLVSDFF LQMLFFTTVL SIDIRRMELA BACU002433/1-1280 GIILIGYFTL VPAIQEFCLF AVVGLVSDFF LQMLFFTTVL SIDIRRMELA 451 500 ENSP00000265565/1-1279 DLNKRLPPEA CLPSAKPVGQ PTRYERQLAV RPSTPHTITL QPSSFRNLRL ENSBTAP00000020961/1-1278 DLNKRLPPEA CLPPAKPVGR PTRFERQPTV RPSMPHTITL QPSSFRNLRL ENSTTRP00000002144/1-1280 DLNKRLPPEA CLPPAKPAGR PARFERQLAV RPSTPHTITL QPSSFRNLRL bmy_05612T0/1-1280 DLNKRLPPEA CLPPAKPAGQ PARFERQLAV RPSTPHTITL QPSSFRNLRL BACU002433/1-1280 DLNKRLPPEA CLPPAKPAGQ PARFERQLAV RPSTPHTITL QPSSFRNLRL 501 550 ENSP00000265565/1-1279 PKRLRVVYFL ARTRLAQRLI MAGTVVWIGI LVYTDPAGLR NYLAAQVTEQ ENSBTAP00000020961/1-1278 PKRLRVIYFL ARTRLAQRLI MAGTVVWIGI LVYTDPAGLR TYLAAQVTEQ ENSTTRP00000002144/1-1280 PKRLRVVYFL ARTRLAQRLI MAGTVVWIGI LVYTDPAGLR TYLTAQVTEQ bmy_05612T0/1-1280 PKRLRVVYFL ARTRLAQRLI MAGTVVWIGI LVYTDPAGLR TYLTAQVTEQ BACU002433/1-1280 PKRLRVVYFL ARTRLAQRLI MAGTVVWIGI LVYTDPAGLR TYLTAQVTEQ 551 600 ENSP00000265565/1-1279 SPLGEGALAP MPVPSGMLPP SHPDPAFSIF PPDAPKLPEN QTSPGESPER ENSBTAP00000020961/1-1278 SPLGEGALAP LPVPSGVLPA SHPDPAFSIF PPDASKLPEN QTLPGEPPEP ENSTTRP00000002144/1-1280 SPLGEGALAS MPVPSGVLPA SHPDPAFSIF PPGASKLPEN QTLPGELPEP bmy_05612T0/1-1280 SPLGEGALAS MPVPSGVLPA SHPDPAFSIF PPGASKLPEN QTLPGELPEP BACU002433/1-1280 SPLGEGALAS MPVPSGVLPA SHPDPAFSIF PPGASKLPEN QTLPGELPEP 601 650 ENSP00000265565/1-1279 GGPAEVVHDS PVPEVTWGPE DEELWRKLSF RHWPTLFSYY NITLAKRYIS ENSBTAP00000020961/1-1278 GGLAEGVHDS PAPEVTWGPE DEELWRKLSF RHWPTLFSYY NITLAKRYVS ENSTTRP00000002144/1-1280 GAPAEGIHDS PAPEVTWGTE DEELWRKLSF RHWPTLFSYY NITLAKRYIS bmy_05612T0/1-1280 GAPAEGVHDS PAPEVTWGTE DEELWRKLSF RHWPTLFSYY NITLAKRYIS BACU002433/1-1280 GAPAEGVHDS PAPEVTWGTE DEELWRKLSF RHWPTLFSYY NITLAKRYIS 651 700 ENSP00000265565/1-1279 LLPVIPVTLR LNPREALEGR HPQDGRSAWP PPGPIPAGHW EAGPKGPGGV ENSBTAP00000020961/1-1278 LLPVIPVTLR LNPREALEGR HPQDGRSAWP PPRPGQGGLW EAGPKGPGTA ENSTTRP00000002144/1-1280 LLPVIPVTLR LNPREALEGR HPQDGRSAWP PPRPEQGGLW EAGPKGPGTA bmy_05612T0/1-1280 LLPVIPVTLR LNPREALEGR HPQDGRSAWP PPRPGQGGLW EAGPKGPGTA BACU002433/1-1280 LLPVIPVTLR LNPREALEGR HPQDGRSAWP PPRPGQGGLW EAGPKGPGTA 701 750 ENSP00000265565/1-1279 QAHGDVTLYK VAALGLATGI VLVLLLLCLY RVLCPRNYGQ LGGGPGRRRR ENSBTAP00000020961/1-1278 QAQRDLTLYK VAALGLASGI VLVLLLLCLY RVLCPRNYGQ PGAGPGRRRR ENSTTRP00000002144/1-1280 QAHRDITLYK VAALGLASGI VLVLLLLCLY RVLCPRNYGQ PGSGPGRRRR bmy_05612T0/1-1280 QAHRDITLYK VAALGLASGI VLVLLLLCLY RVLCPRNYGQ PGSGPGRRRR BACU002433/1-1280 QAHRDITLYK VAALGLASGI ILVLLLLCLY RVLCPRNYGQ PGSGPGRRRR 751 800 ENSP00000265565/1-1279 GELPCDDYGY APPETEIVPL VLRGHLMDIE CLASDGMLLV SCCLAGHVCV ENSBTAP00000020961/1-1278 GELPCDDYGY APPETEIVPL VLRGHLMDIE CLASDGMLLV SCCLAGHVCV ENSTTRP00000002144/1-1280 GELPCDDYGY APPETEIVPL VLRGHLMDIE CLASDGMLLV SCCLAGHVCV bmy_05612T0/1-1280 GELPCDDYGY APPETEIVPL VLRGHLMDIE CLASDGMLLV SCCLAGHVCV BACU002433/1-1280 GELPCDDYGY APPETEIVPL VLRGHLMDIE CLASDGMLLV SCCLAGHVCV 801 850 ENSP00000265565/1-1279 WDAQTGDCLT RIPRPGRQRR DSGVGSGLEA QESWERLSDG GKAGPEEPGD ENSBTAP00000020961/1-1278 WDAQTGDCLT RIPHPG-QRR DSGVGSGLET QETWERLSDG GKGGPEEPGD ENSTTRP00000002144/1-1280 WDAQTGDCLT RIPHLGRQRQ DSGVGSVLEA QESWERLSDG GKGGPEEPGD bmy_05612T0/1-1280 WDAQTGDCLT RIPHPGRQRQ DSGVGSVLEA QESWERLSDG GKGGPEEPGD BACU002433/1-1280 WDAQTGDCLT RIPHPGRQRQ DSGVGSLLEA QESWERLSDG GKGGPEEPGD 851 900 ENSP00000265565/1-1279 SPPLRHRPRG PPPPSLFGDQ PDLTCLIDTN FSAQPRSSQP TQPEPRHRAV ENSBTAP00000020961/1-1278 SPPLRHRPRG PPPPALFGDQ PDLTCLIDTN FSARPQLPEP AQPEPRYRAG ENSTTRP00000002144/1-1280 SPPLRHRPRG PPPTSLFGDQ PDLTCLIDTN FSAQPQLLEP AQPEPRYRAG bmy_05612T0/1-1280 SPPLRHRPRG PPPPSLFGDQ PDLTCLIDTN FSAQPQLLEP AQPEPRYRAG BACU002433/1-1280 SPPLRHRPRG PPPPSLFGDQ PDLTCLIDTN FSAQPQLLEP AQPEPRYRAG 901 950 ENSP00000265565/1-1279 CGRSRDSPGY DFSCLVQRVY QEEGLAAVCT PALRPPSPGP VLSQAPEDEG ENSBTAP00000020961/1-1278 -RRAQDSAGY DFSRLVQRVY QEGGMAPVHT PALRPPSPGP TFPLAPEDEA ENSTTRP00000002144/1-1280 CRRAQASPGY DFSHLVQRLY QEEGMAPVHT PALRPPSPGP TLPQAPEDEG bmy_05612T0/1-1280 CRRAQASLGY DFSHLVQRLY QEEGMAPVHT PALRPPSPGP TLPQAPEDEG BACU002433/1-1280 CRRAQASPGY DFSHLVQRLY QEEGMAPVHT PALRPPSPGP TLPQAPEDEG 951 1000 ENSP00000265565/1-1279 G-SPEKGSPS LAWAPSAEGS IWSLELQGNL IVVGRSSGRL EVWDAIEGVL ENSBTAP00000020961/1-1278 GFPPEKSCPS LAWAPSADGS IWSLELQGSL IVVGRSSGRL EVWDAIEGTL ENSTTRP00000002144/1-1280 GFPPEKGSPS LAWAPSADGS IWSLELQGSL IVVGRSSGRL EVWDAIEGTL bmy_05612T0/1-1280 GFPPEKGSPS LAWAPSADGS IWSLELQGSL IVVGRSSGRL EVWDAIEGTL BACU002433/1-1280 GFAPEKGSPS LAWAPSADGS IWSLELQGSL IVVGRSSGRL EVWDAIEGTL 1001 1050 ENSP00000265565/1-1279 CCSSEEVSSG ITALVFLDKR IVAARLNGSL DFFSLETHTA LSPLQFRGTP ENSBTAP00000020961/1-1278 RCSSEEVSSG ITALVFLDRR IVAARLNGSL DFFSLETHTA LSPLQFRGAP ENSTTRP00000002144/1-1280 RCSSEEVSSG ITALVFLDKR IVAARLNGSL DFFSLETHTA LSPLQFRGAP bmy_05612T0/1-1280 RCSSEEVSSG ITALVFLDKR IVAARLNGSL DFFSLETHTA LSPLQFRGAP BACU002433/1-1280 RCSSEEVSSG ITALVFLDKR IVAARLNGSL DFFSLETHTA LSPLQFRGAP 1051 1100 ENSP00000265565/1-1279 GRGSSPASPV YSSSDTVACH LTHTVPCAHQ KPITALKAAA GRLVTGSQDH ENSBTAP00000020961/1-1278 GRGSSPASPA CSSSDRVACH LTHTVPCAHQ KPITALKAAA GRLVTGSQDH ENSTTRP00000002144/1-1280 GRGSSPTSPM YSSSDAVACH LTHTVPCAHQ KPITALKAAA GRLVTGSQDH bmy_05612T0/1-1280 GRGSSPTSPM YSSSDAVACH LTHTVPCAHQ KPITALKAAA GRLVTGSQDH BACU002433/1-1280 GRGSSPTSPM YSSSDAVACH LTHTVPCAHQ KPITALKAAA GRLVTGSQDH 1101 1150 ENSP00000265565/1-1279 TLRVFRLEDS CCLFTLQGHS GAITTVYIDQ TMVLASGGQD GAICLWDVLT ENSBTAP00000020961/1-1278 TLRVFRLEDS CCLFTLQGHS GAITTVYIDQ TMVLASGGQD GAICLWDVLT ENSTTRP00000002144/1-1280 TLRVYRLEDS CCLFTLQGHS GAITTVYIDQ TMVLASGGQD GAICLWDVLT bmy_05612T0/1-1280 TLRVYRLEDS CCLFTLQGHS GAITTVYIDQ TMVLASGGQD GAICLWDVLT BACU002433/1-1280 TLRVYRLEDS CCLFTLQGHS GAITTVYIDQ TMVLASGGQD GAICLWDVLT 1151 1200 ENSP00000265565/1-1279 GSRVSHVFAH RGDVTSLTCT TSCVISSGLD DLISIWDRST GIKFYSIQQD ENSBTAP00000020961/1-1278 GSRVSHMFAH RGDVTSLTCT TSCVISSGLD DLISIWDRST GIKLYSIQQD ENSTTRP00000002144/1-1280 GSRVSHMFAH RGDVTSLTCT TSCVISSGLD DLISIWDRST GIRLYSIQQD bmy_05612T0/1-1280 GSRVSHMFAH RGDVTSLTCT TSCVISSGLD DLISIWDRST GIRLYSIQQD BACU002433/1-1280 GSRVSHMFAH RGDVTSLTCT TSCVISSGLD DLISIWDRST GIRLYSIQQD 1201 1250 ENSP00000265565/1-1279 LGCGASLGVI SDNLLVTGGQ GCVSFWDLNY GDLLQTVYLG KNSEAQPARQ ENSBTAP00000020961/1-1278 LGCGASLGVI SDNLLVTGGQ GCVSFWDLNY GDLLQTVYLG KNSEAQPARQ ENSTTRP00000002144/1-1280 LGCGASLGVI SDNLLVTGGQ GCVSFWDLNY GDLLQTVYLG KNSEAQPARQ bmy_05612T0/1-1280 LGCGASLGVI SDNLLVTGGQ GCVSFWDLNY GDLLQTVYLG KNSEAQPARQ BACU002433/1-1280 LGCGASLGVI SDNLLVTGGQ GCVSFWDLNY GDLLQTVYLG KNSEAQPARQ 1251 1300 ENSP00000265565/1-1279 ILVLDNAAIV CNFGSELSLV YVPSVLEKLD ENSBTAP00000020961/1-1278 ILVLDNAAIV CNFGSELSLV YVPSVLEKLD ENSTTRP00000002144/1-1280 ILVLDNAAIV CNFGSELSLV YVPSVLEKLD bmy_05612T0/1-1280 ILVLDNAAIV CNFGSELSLV YVPSVLEKLD BACU002433/1-1280 ILVLDNAAIV CNFGSELSLV YVPSVLEKLD