KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:12 2014 Check: 00 .. Name: bmy_07057T0/1-307 Len: 558 Check: 4979 Weight: 1.00 Name: ENSP00000329140/1-520 Len: 558 Check: 1038 Weight: 1.00 Name: ENSBTAP00000020987/1-493 Len: 558 Check: 7021 Weight: 1.00 Name: BACU006760/1-521 Len: 558 Check: 4607 Weight: 1.00 Name: ENSTTRP00000004562/1-520 Len: 558 Check: 9641 Weight: 1.00 // 1 50 bmy_07057T0/1-307 ---------- ---------- ---------- ---------- ---------- ENSP00000329140/1-520 MEVLESGEQG VLQWDRKLSE LSEPGDGEAL MYHTHFSELL DEFSQNVLGQ ENSBTAP00000020987/1-493 ---------- ---------- ---------- MYHTHFSELL DEFSQNVLGQ BACU006760/1-521 ---------- ---------- ---------- ----HFSELL DEFSQNVLGQ ENSTTRP00000004562/1-520 MEVLESGEQS VLQWDRKLSE LSEPGETEAL MYHTHFSELL DEFSQNVLGQ 51 100 bmy_07057T0/1-307 ---------- ---------- ---------- ---------- --------MC ENSP00000329140/1-520 LLNDPFLSEK SVSMEVEPSP TSPAPLIQAE HSYSLCEEPR AQSPFTHITT ENSBTAP00000020987/1-493 LLNDPFLSEK SVSMEVEPSP TSPAPLIQAE HSYSLCEEPR AQSPFTHITA BACU006760/1-521 LLNDPFLSEK SVSMEVEPSP TSPAPLIQAE HSYSLCEEPR AQSPFAHVTA ENSTTRP00000004562/1-520 LLNDPFLSEK SVSMEVEPSP TSPAPLIQAE HSYSLCEEPR AQSPFAHVTA 101 150 bmy_07057T0/1-307 AYLFPTDEVE SEKWYLSTDF PSTTIKTEPI TDEPPSGLVP SVTLTITAIS ENSP00000329140/1-520 SDSFNDDEVE SEKWYLSTDF PSTSIKTEPV TDEPPPGLVP SVTLTITAIS ENSBTAP00000020987/1-493 SDSFNDDEVE SEKWYLSPDF PPTTIKTEPI TDEPPSGLVP SVTLTITAIS BACU006760/1-521 SDSFNDDEVE SEKWYLSTDF PSTTIKTEPI TDEPPSGLVP SVTLTITAIS ENSTTRP00000004562/1-520 SDSFNDDEVE SEKWYLSTDF PSTTIKTEPI TDEPPSGLVP SVTLTITAIS 151 200 bmy_07057T0/1-307 TPFEKEEPPL EMN---AGVD SSCQTVIPKI KLEPHEVDQF LNFSPKEASV ENSP00000329140/1-520 TPLEKEEPPL EMN---TGVD SSCQTIIPKI KLEPHEVDQF LNFSPKEAPV ENSBTAP00000020987/1-493 TPFEKEETPX XXXSFWSQVD SSCQTIIPKI KLEPHEVDQF LNFSPKEASV BACU006760/1-521 TPFEKEEPPL EMN---AGVD SSCQTVIPKI KLEPHEVDQF LNFSPKEASV ENSTTRP00000004562/1-520 TPFEEEEPPL EMN---AGVD SSCQTVIPKI KLEPHEVDQF LNFSPKEASV 201 250 bmy_07057T0/1-307 DHLHLPPTPP SSHSSDSEGS LSPSPRLHPF GLPQTHSPAR APARAPSALA ENSP00000329140/1-520 DHLHLPPTPP SSHGSDSEGS LSPNPRLHPF SLPQTHSPSR AAPRAPSALS ENSBTAP00000020987/1-493 DHLHLPPTPP SSNSSDSEGS LSPSPRLHPF GLPQTHSPAR APARAPSALA BACU006760/1-521 DHLHLPPTPP SSHSSDSEGS LSPSPRLHPF GLPQTHSPAR APARAPSALA ENSTTRP00000004562/1-520 DHLHLPPTPP SSHSSDSEGS LSPSPRLHPF GLPQTHSPAR APARAPSALA 251 300 bmy_07057T0/1-307 SSPLLTAPHK LQGSGPLVLT EEEKRTLIAE GYPIPTKLPL TKSEEKALKK ENSP00000329140/1-520 SSPLLTAPHK LQGSGPLVLT EEEKRTLIAE GYPIPTKLPL SKSEEKALKK ENSBTAP00000020987/1-493 SSPLLTAPHK LQGSGPLVLT EEEKRTLIAE GYPIPTKLPL TKSEEKALKK BACU006760/1-521 SSPLLTAPHK LQGSGPLVLT EEEKRTLIAE GYPIPTKLPL TKSEEKALKK ENSTTRP00000004562/1-520 SSPLLTAPHK LQGSGPLVLT EEEKRTLIAE GYPIPTKLPL TKSEEKALKK 301 350 bmy_07057T0/1-307 IRRKIKNKIS AQESRRKKKE YMDSLEKKGE AL-------- ---------- ENSP00000329140/1-520 IRRKIKNKIS AQESRRKKKE YMDSLEKKVE SCSTENLELR KKVEVLENTN ENSBTAP00000020987/1-493 IRRKIKNKIS AQESRRKKKE YMDSLEKKVE SCSTENLELR KKVEVLENTN BACU006760/1-521 IRRKIKNKIS AQESRRKKKE YMDSLEKKVE SCSTENLELR KKVEVLENTN ENSTTRP00000004562/1-520 IRRKIKNKIS AQESRRKKKE YMDSLEKKVE SCSTENSELR KKVEVLENTN 351 400 bmy_07057T0/1-307 ---------- ---------- ---------- ---------- ----INQFLL ENSP00000329140/1-520 ---------- ---------- ---------- -----RTLLQ QLQKLQTLVM ENSBTAP00000020987/1-493 ---------- ---------- ---------- -----RTLLQ QLQKLQTLVM BACU006760/1-521 RCTATATSLE PGADITHKHS LVSQTPFMAL IRCVCRTLLQ QLQKLQTLVM ENSTTRP00000004562/1-520 ---------- ---------- ---------- -----RTLLQ QLQKLQTLVM 401 450 bmy_07057T0/1-307 ATLPRTLEKA AGDEGGVLF- ---------- ---------- ---------- ENSP00000329140/1-520 GKVSRTCKLA GTQTGTCLMV VVLCFAVAFG SFFQGYGPYP SATKMALPSQ ENSBTAP00000020987/1-493 GKVSRTCKLA GTQTGTCLMV VVLCFAVAFG SFFQGYGPYP SATKMALPSQ BACU006760/1-521 GKVSRTCKLA GTQTGTCLMV VVLCFAVAFG TFFQGYGPYP SATKMALPNQ ENSTTRP00000004562/1-520 GKVSRTCKLA GTQTGTCLMV VVLCFAVAFG TFFQGYGPYP SATKMALPSQ 451 500 bmy_07057T0/1-307 ---------- ---NREL--- ---------- ---GASEEGG GSGEHQQVRV ENSP00000329140/1-520 HSLQEPYTAS VVRSRNLLIY EEHSPPEESS SPGSAGELGG WDRGSSLLRV ENSBTAP00000020987/1-493 HSLQEPYTSS VVRSRNLLIY EEHSPLEEPP SSASAGELGR WDRGSALLRA BACU006760/1-521 HSMQEPYTAS VVRSRNLLIY EEHSPLEEPS SSASAGELGR WDGGSSLLRA ENSTTRP00000004562/1-520 HSMQEPYTAS IVRSRNLLIY EEHSPLEEPS SSASAGELGR WDRGSSLLRA 501 550 bmy_07057T0/1-307 PGVRS----- ---------- --QYSCLME- -----GGERG GDPGPELGGE ENSP00000329140/1-520 SGLESRPDVD LPHFIISNET SLEKSVLLEL QQHLVSAKLE GNETLKVVEL ENSBTAP00000020987/1-493 KGLESRPDVD LPHFIISNET SLEKSVLLEL QQHMVSTNLE GNETLKVVEL BACU006760/1-521 SGLESRPDVD LPHFIISNET SLEKSVLLEL QQHLVSTKLE GNETLKVVEL ENSTTRP00000004562/1-520 SGLESRPDVD LPRFIISNET SLEKSVLLEL QQHLVSTKLE GNETLKVVEL 551 600 bmy_07057T0/1-307 GRR----- ENSP00000329140/1-520 DRRVNTTF ENSBTAP00000020987/1-493 DRRVNATF BACU006760/1-521 DRRVNATF ENSTTRP00000004562/1-520 DRRVNATF