KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:14 2014 Check: 00 .. Name: bmy_15372T0/1-1162 Len: 1453 Check: 7542 Weight: 1.00 Name: BACU001055/1-1411 Len: 1453 Check: 6357 Weight: 1.00 Name: ENSTTRP00000011206/1-1162 Len: 1453 Check: 4081 Weight: 1.00 Name: ENSP00000316527/1-1411 Len: 1453 Check: 7582 Weight: 1.00 Name: ENSBTAP00000020995/1-1411 Len: 1453 Check: 7172 Weight: 1.00 // 1 50 bmy_15372T0/1-1162 ---------- ---------- ---------- ---------- ---------- BACU001055/1-1411 MSLSSGASGG KGVDANPVET YDSGDEWDIG VGNLIIDLDA DLEKDQQKLE ENSTTRP00000011206/1-1162 ---------- ---------- ---------- ---------- ---------- ENSP00000316527/1-1411 MSLSSGASGG KGVDANPVET YDSGDEWDIG VGNLIIDLDA DLEKDQQKLE ENSBTAP00000020995/1-1411 MSLSSGASGG KGVDANPVET YDSGDEWDIG VGNLIIDLDA DLEKDQQKLE 51 100 bmy_15372T0/1-1162 ---------- ---------- ---------- ---------- ---------- BACU001055/1-1411 MSGSKEVGIP APNAVATLPD NIKFVTPVPG PQGKEGKSKS KRNKSGKDTS ENSTTRP00000011206/1-1162 ---------- ---------- ---------- ---------- ---------- ENSP00000316527/1-1411 MSGSKEVGIP APNAVATLPD NIKFVTPVPG PQGKEGKSKS KRSKSGKDTS ENSBTAP00000020995/1-1411 MSGSKEVGIP APNAVATLPD NIKFVTPVPG PQGKEGKSKS KRNKSGKDTS 101 150 bmy_15372T0/1-1162 ---------- ---------- ---------- ---------- ---------- BACU001055/1-1411 KPPPGTSLFT PSEGAASKKE VQGRSGDGAS AGSLAAALAP KGSEKVAKAP ENSTTRP00000011206/1-1162 ---------- ---------- ---------- ---------- ---------- ENSP00000316527/1-1411 KPTPGTSLFT PSEGAASKKE VQGRSGDGAN AGGLVAAIAP KGSEKAAKAS ENSBTAP00000020995/1-1411 KPTPGTSLFT PSEGAASKKE VQGRSGDGAN AGSLVAAIAP KGSEKAAKAS 151 200 bmy_15372T0/1-1162 ---------- ---------- ---------- ---------- ---------- BACU001055/1-1411 RSVAGSKKEK ENSSSKSKKE RSEGVGTCSE KDPGVLQPVP LGGRGGQYDG ENSTTRP00000011206/1-1162 ---------- ---------- ---------- ---------- ---------- ENSP00000316527/1-1411 RSVAGSKKEK ENSSSKSKKE RSEGVGTCSE KDPGVLQPVP LGGRGGQYDG ENSBTAP00000020995/1-1411 RSVAGSKKEK ENSSSKSKKE RSEGVGTCAE KDPGVLQPVP LGGRGGQYDG 201 250 bmy_15372T0/1-1162 ---------- ---------- MLLGPLGPRA PPK------- ---------- BACU001055/1-1411 STGVDPGAVE PLGSIALEPG AALNPLGAKP EPEEGENECR PLKKVKSEKM ENSTTRP00000011206/1-1162 ---------- ---------- ---------- ---------- ---------M ENSP00000316527/1-1411 SAGVDTGAVE PLGSIAIEPG AALNPLGTKP EPEEGENECR LLKKVKSEKM ENSBTAP00000020995/1-1411 SAGVDPGAVE PLGSIAIEPG AALNPLGAKP EPEEGENECR PLKKVKSEKM 251 300 bmy_15372T0/1-1162 ---------- ---------- -----PS--- ---YRSPNAT QMENTL---- BACU001055/1-1411 ESPVSTPAVL PLHLLVPVAN NDIASPCEQI MVRTRSVGVN TCDVALATEP ENSTTRP00000011206/1-1162 ESPVSTPAVL PLHLLVPVVN NDIASPCEQI MVRTRSVGVN TCDVALATEP ENSP00000316527/1-1411 ESPVSTPAVL PIHLLVPVVN NDISSPCEQI MVRTRSVGVN TCDVALATEP ENSBTAP00000020995/1-1411 ESPVSTPAVL PLHLLVPVVS NDISSPCEQI MVRTRSVGVN TCDVALATEP 301 350 bmy_15372T0/1-1162 ---------- ---LSG---- --QQRMLVVN VTWRNKTYVG TLLDCTRHDW BACU001055/1-1411 ECLGPCEPGT SVNLEGIVWQ ETEDGMLVVN VTWRNKTYVG TLLDCTRHDW ENSTTRP00000011206/1-1162 ECLGPCEPGT SVNLEGIVWQ ETEDGMLVVN VTWRNKTYVG TLLDCTRHDW ENSP00000316527/1-1411 ECLGPCEPGT SVNLEGIVWQ ETEDGMLVVN VTWRNKTYVG TLLDCTRHDW ENSBTAP00000020995/1-1411 ECLGPCEPGT SVNLEGIVWQ ETEDGMLVVN VTWRNKTYVG TLLDCTRHDW 351 400 bmy_15372T0/1-1162 APPRFCDSPT SDLEMRNGRG RGKRMRPNSN TPVNETATAS DSKGTSSSSK BACU001055/1-1411 APPRFCDSPT SDLEMRNGRG RGKRMRPNSN TPVNETATAS DSKGTSSSSK ENSTTRP00000011206/1-1162 APPRFCDSPT SDLEMRNGRG RGKRMRPNSN TPVNETATAS DSKGTSSSSK ENSP00000316527/1-1411 APPRFCDSPT SDLEMRNGRG RGKRMRPNSN TPVNETATAS DSKGTSNSSK ENSBTAP00000020995/1-1411 APPRFCDSPT SDLEMRNGRG RGKRMRPNSN TPVNETATAS DSKGTSSSSK 401 450 bmy_15372T0/1-1162 TRAGANSKGR RGSQNSSEHR PAASSTSEDV KASPSSANKR KNKPLSDMEL BACU001055/1-1411 TRAGANSKGR RGSQNSSEHR PAASSTSEDV KASPSSANKR KNKPLSDMEL ENSTTRP00000011206/1-1162 TRAGANSKGR RGSQNSSEHR PAASSTSEDV KASPSSATKR KNKPLSDMEL ENSP00000316527/1-1411 TRAGANSKGR RGSQNSSEHR PPASSTSEDV KASPSSANKR KNKPLSDMEL ENSBTAP00000020995/1-1411 TRAGANSKGR RGSQNSSEHR PPASSTSEDV KASPSSANKR KNKPLSDMEL 451 500 bmy_15372T0/1-1162 NSSSEDSKGS KRVRTNSMGS ATGPLPGTKV EPTVLDRNCP SPVLIDCPHP BACU001055/1-1411 NSSSEDSKGS KRVRTNSMGS ATGPLPGTKV EPTVLDRNCP SPVLIDCPHP ENSTTRP00000011206/1-1162 NSSSEDSKGS KRVRTNSMGS ATGPLPGTKV EPTVLDRNCP SPVLIDCPHP ENSP00000316527/1-1411 NSSSEDSKGS KRVRTNSMGS ATGPLPGTKV EPTVLDRNCP SPVLIDCPHP ENSBTAP00000020995/1-1411 NSSSEDSKGS KRVRTNSMGS ATGPLPGTKV EPTVLDRNCP SPVLIDCPHP 501 550 bmy_15372T0/1-1162 NCNKKYKHIN GLKYHQAHAH TDDDSKPEAD GDSEYGEEPT LHADLGSCNG BACU001055/1-1411 NCNKKYKHIN GLKYHQAHAH TDDDSKPEAD GDSEYGEEPT LHADLGSCNG ENSTTRP00000011206/1-1162 NCNKKYKHIN GLKYHQAHAH TDDDSKPEAD GDSEYGEEPT LHADLGSCNG ENSP00000316527/1-1411 NCNKKYKHIN GLKYHQAHAH TDDDSKPEAD GDSEYGEEPI LHADLGSCNG ENSBTAP00000020995/1-1411 NCNKKYKHIN GLKYHQAHAH TDDDSKPEAD GDSEYGEEPA LHADLGSCNG 551 600 bmy_15372T0/1-1162 ASVSQKGSLS PARSATPKVR LIEPHSPSPS SKFSTKGLCK KKLSGEGDTD BACU001055/1-1411 ASVSQKGSLS PARSATPKVR LIEPHSPSPS SKFSTKGLCK KKLSGEGDTD ENSTTRP00000011206/1-1162 ASVSQKGSLS PARSATPKVR LIEPHSPSPS SKFSTKGLCK KKLSGEGDPD ENSP00000316527/1-1411 ASVSQKGSLS PARSATPKVR LVEPHSPSPS SKFSTKGLCK KKLSGEGDTD ENSBTAP00000020995/1-1411 ASVSQKGSLS PARSATPKVR LVEPHSPSPS SKFSTKGLCK KKLSGEGDTD 601 650 bmy_15372T0/1-1162 LGALSNDGSD DGPSVMDETS NDAFDSLERK CMEKEKCKKP SSLKPEKIPS BACU001055/1-1411 LGALSNDGSD DGPSVMDETS NDAFDSLERK CMEKEKCKKP SSLKPEKIPS ENSTTRP00000011206/1-1162 LGALSNDGSD DGPSVMDETS NDAFESLERK CMEKEKCKKL SSLKPEKIPS ENSP00000316527/1-1411 LGALSNDGSD DGPSVMDETS NDAFDSLERK CMEKEKCKKP SSLKPEKIPS ENSBTAP00000020995/1-1411 LGALSNDGSD DGPSVMDETS NDAFDSLERK CMEKEKCKKP SSLKPEKIPS 651 700 bmy_15372T0/1-1162 KSLKSARPIA PAIPPQQIYT FQTATFTAAS PGSSSGLTTT VVQAMPNSPQ BACU001055/1-1411 KSLKSARPIA PAIPPQQIYT FQTATFTAAS PGSSSGLTTT VVQAMPNSPQ ENSTTRP00000011206/1-1162 KSLKSARPIA PAIPPQQIYT FQTATFTAAS PGSSSGLTTT VVQAMPNSPQ ENSP00000316527/1-1411 KSLKSARPIA PAIPPQQIYT FQTATFTAAS PGSSSGLTAT VAQAMPNSPQ ENSBTAP00000020995/1-1411 KSLKSARPIA PAIPPQQIYT FQTATFTAAS PGSSSGLTTT VVQAMPNSPQ 701 750 bmy_15372T0/1-1162 LKPIQPKPTV MGEPFTVNPA LTPAKDKKKK DKKKKESSKE LESPLTPGKV BACU001055/1-1411 LKPIQPKPTV MGEPFTVNPA LTPAKDKKKK DKKKKESSKE LESPLTPGKV ENSTTRP00000011206/1-1162 LKPIQPKPTV MGEPFTVNPA LTPAKDKKKK DKKKKESSKE LESPLTPGKV ENSP00000316527/1-1411 LKPIQPKPTV MGEPFTVNPA LTPAKDKKKK DKKKKESSKE LESPLTPGKV ENSBTAP00000020995/1-1411 LKPIQPKPTV MGEPFTVNPA LTPAKDKKKK EKKKKESSKE LESPLTPGKV 751 800 bmy_15372T0/1-1162 CRAEEGKSPF RESSGDGMKM EVLLNGSSDP HQSRLASIKA EADKIYSFTD BACU001055/1-1411 CRAEEGKSPF RESSGEGMKM EVLLNGSSDP HQSRLASIKA EADKIYSFTD ENSTTRP00000011206/1-1162 CRAEEGKSPF RESSGDGMKM EVLLNGSSDP HQSRLASIKA EADKIYSFTD ENSP00000316527/1-1411 CRAEEGKSPF RESSGDGMKM EGLLNGSSDP HQSRLASIKA EADKIYSFTD ENSBTAP00000020995/1-1411 CRAEEGKSPF RESSGDGMKM EGLLNGSSDP HQSRLASIKA EADKIYSFTD 801 850 bmy_15372T0/1-1162 NAPSPSIGGC SRLDSTTPTQ PMTPLHVVTQ NGAEASSVKT NSPAYSDISD BACU001055/1-1411 NAPSPSIGGC SRLDSTTPTQ PMTPLHVVTQ NGAEASSVKT NSPAYSDISD ENSTTRP00000011206/1-1162 NAPSPSIGGC SRLDSTTPTQ PMTPLHVVTQ NGAEASSVKT NSPAYSDISD ENSP00000316527/1-1411 NAPSPSIGGS SRLENTTPTQ PLTPLHVVTQ NGAEASSVKT NSPAYSDISD ENSBTAP00000020995/1-1411 NAPSPSIGGS SRLDSTTPTQ PMTPLHVVTQ NGAEASSVKT NSPAYSDISD 851 900 bmy_15372T0/1-1162 AGEDGEGKVE SVKSKDPEQL VKDGAKKTLF PPQPQSKDSP YYQGFESYYS BACU001055/1-1411 AGEDGEGKVE SVKSKDPEQL VKDGAKKTLF PPQPQSKDSP YYQGFESYYS ENSTTRP00000011206/1-1162 AGEDGEGKVE SVKSKDPEQL AKDGAKKTLF PPQPQSKDSP YYQGFESYYS ENSP00000316527/1-1411 AGEDGEGKVD SVKSKDAEQL VKEGAKKTLF PPQPQSKDSP YYQGFESYYS ENSBTAP00000020995/1-1411 AGEDGEGKVD SVKSKDPEQL VKEGAKKTLF PPQPQSKDSP YYQGFESYYS 901 950 bmy_15372T0/1-1162 PSYTQSSPGA LNPSSQAGVE SQALKTKKDE EPESIEGKVK NDACEEKKPE BACU001055/1-1411 PSYTQSSPGA LNPSSQAGVE SQALKTKKDE EPESIEGKVK NDACEEKKPE ENSTTRP00000011206/1-1162 PSYTQSSPGA LNPSSQAGVE SQALKTKKDE EPESIEGKVK NDACEEKKPE ENSP00000316527/1-1411 PSYAQSSPGA LNPSSQAGVE SQALKTKRDE EPESIEGKVK NDICEEKKPE ENSBTAP00000020995/1-1411 PSYAQSSPGA LNPSSQAGVE SQALKTKKDE EPETIEGKVK NDVCEEKKPE 951 1000 bmy_15372T0/1-1162 LSSSSQQPSV IQQRPNMYMQ SLYYNQYAYV PPYGYSDQSY HTHLLSTNTA BACU001055/1-1411 LSSSSQQPSV IQQRPNMYMQ SLYYNQYAYV PPYGYSDQSY HTHLLSTNTA ENSTTRP00000011206/1-1162 LSSSSQQPSV IQQRPNMYMQ SLYYNQYAYV PPYGYSDQSY HTHLLSTNTA ENSP00000316527/1-1411 LSSSSQQPSV IQQRPNMYMQ SLYYNQYAYV PPYGYSDQSY HTHLLSTNTA ENSBTAP00000020995/1-1411 LSSSSQQPSV IQQRPNMYMQ SLYYNQYAYV PPYGYSDQSY HTHLLSTNSA 1001 1050 bmy_15372T0/1-1162 YRQQYEEQQK RQSLEQQQRG LDKKAEMGLK EREAALKEEW KQKPSVPPSL BACU001055/1-1411 YRQQYEEQQK RQSLEQQQRG LDKKAEMGLK EREAALKEEW KQKPSVPPSL ENSTTRP00000011206/1-1162 YRQQYEEQQK RQSLEQQQRG LDKKAEMGLK EREAALKEEW KQKPSVPPSL ENSP00000316527/1-1411 YRQQYEEQQK RQSLEQQQRG VDKKAEMGLK EREAALKEEW KQKPSIPPTL ENSBTAP00000020995/1-1411 YRQQYEEQQK RQSLEQQQRG LDKKAEMGLK EREAALKEDW KQKPSIPPTL 1051 1100 bmy_15372T0/1-1162 TKAPSLTDLV KSGPGKAKEQ GADPAKSVII PKLDDSSKLP SQAPEGLKVK BACU001055/1-1411 TKAPSLTDLV KSGPGKAKEQ GADPAKSVII PKLDDSSKLP SQAPEGLKVK ENSTTRP00000011206/1-1162 TKAPSLTDLV KSGPGKAKEQ GADPAKSVII PKLDDSSKLP SQAPEGLKVK ENSP00000316527/1-1411 TKAPSLTDLV KSGPGKAKEP GADPAKSVII PKLDDSSKLP GQAPEGLKVK ENSBTAP00000020995/1-1411 TKAPSLTDLV KSGPSKAKEP GADPAKSVII PKLDDSSKLP SQAPEGLKVK 1101 1150 bmy_15372T0/1-1162 LSEASHLGKE ASEAKTGAEC GRQAEVDPIL WYRQEAEPRM WTYVYPAKYS BACU001055/1-1411 LSEASHLGKE ASEAKTGAEC GRQAEVDPIL WYRQEAEPRM WTYVYPAKYS ENSTTRP00000011206/1-1162 LSEASHLGKE ASEAKTGAEC GRQAEVDPIL WYRQEAEPRM WTYVYPAKYS ENSP00000316527/1-1411 LSDASHLSKE ASEAKTGAEC GRQAEMDPIL WYRQEAEPRM WTYVYPAKYS ENSBTAP00000020995/1-1411 LSEASHLGKE TSEAKTGADC GRQAEVDPIL WYRQEAEPRM WTYVYPAKYS 1151 1200 bmy_15372T0/1-1162 DIKSEDERWK EERDRKLKEE RSRSKDSVPK EDGKESTSSD CKLPTSEESR BACU001055/1-1411 DIKSEDERWK EERDRKLKEE RSRSKDSVPK EDGKESTSSD CKLPTSEESR ENSTTRP00000011206/1-1162 DIKSEDERWK EERDRKLKEE RSRSKDSVPK EDGKESTSSD CKLPTSEESR ENSP00000316527/1-1411 DIKSEDERWK EERDRKLKEE RSRSKDSVPK EDGKESTSSD CKLPTSEESR ENSBTAP00000020995/1-1411 DIKPEDERWK EERDRKLKEE RSRSKDSVPK EDGKESTSSD CKLPTSEEPR 1201 1250 bmy_15372T0/1-1162 LGSKEPRPSV HVPVSSPLTQ HQSYIPYMHG YSYSQSYDPN HPSYRGMPAV BACU001055/1-1411 LGSKEPRPSV HVPVSSPLTQ HQSYIPYMHG YSYSQSYDPN HPSYRGMPAV ENSTTRP00000011206/1-1162 LGSKEPRPGV HVPVSSPLTQ HQSYIPYMHG YSYSQSYDPN HPSYRGMPAV ENSP00000316527/1-1411 LGSKEPRPSV HVPVSSPLTQ HQSYIPYMHG YSYSQSYDPN HPSYRSMPAV ENSBTAP00000020995/1-1411 LGGKEPRPSV HVPVSSPLTQ HQPYIPYMHG YSYSQSYDPS HPSYRGMPAV 1251 1300 bmy_15372T0/1-1162 MMQNYPGSYL PSSYSFSPYG SKVSGGEDAD KARASPSVSC KSSSESKALD BACU001055/1-1411 MMQNYPGSYL PSSYSFSPYG SKVSGGEDAD KARASPSVSC KSSSESKALD ENSTTRP00000011206/1-1162 MMQNYPGSYL PSSYSFSPYG SKVSGGEDAD KARASPSVSC KSSSESKALD ENSP00000316527/1-1411 MMQNYPGSYL PSSYSFSPYG SKVSGGEDAD KARASPSVTC KSSSESKALD ENSBTAP00000020995/1-1411 MMQNYPGSYL PSSYSFSPYG SKVSGGEDAD KARASPSVSC KSSSESKALD 1301 1350 bmy_15372T0/1-1162 LLQQHASHYK SKSPTISDKT SQERDRGGCG VVGGGGSCSS VGGAGGGERS BACU001055/1-1411 LLQQHASHYK SKSPTISDKT SQERDRGGCG VVGGGGSCSS VGGAGGGERS ENSTTRP00000011206/1-1162 LLQQHASHYK SKSPTISDKT SQERDRGGCG AVGGGGSCSS VGGAGGGERS ENSP00000316527/1-1411 ILQQHASHYK SKSPTISDKT SQERDRGGCG VVGGGGSCSS VGGASGGERS ENSBTAP00000020995/1-1411 ILQQHASHYK SKSPTISDKT SQERDRGGCG VVGGGGSCSS VGGAGGGERS 1351 1400 bmy_15372T0/1-1162 VDRPRTSPSQ RLMSTHHHHH HLGYSLLPAQ YNLPYAAGLS STAIVASQQG BACU001055/1-1411 VDRPRTSPSQ RLMSTHHHHH HLGYSLLPAQ YNLPYAAGLS STAIVASQQG ENSTTRP00000011206/1-1162 VDRPRTSPSQ RLMSTHHHHH HLGYSLLPAQ YNLPYAAGLS STAIVASQQG ENSP00000316527/1-1411 VDRPRTSPSQ RLMSTHHHHH HLGYSLLPAQ YNLPYAAGLS STAIVASQQG ENSBTAP00000020995/1-1411 VDRPRTSPSQ RLMSTHHHHH HLGYSLLPAQ YNLPYAAGLS STAIVASQQG 1401 1450 bmy_15372T0/1-1162 STPSLYPPPR RTPSARIKSA SRAWTGSPKE VLEVPFRHQL NGIDHPVCRS BACU001055/1-1411 STPSLYPPPR R--------- ---------- ---------- ---------- ENSTTRP00000011206/1-1162 STPSLYPPPR R--------- ---------- ---------- ---------- ENSP00000316527/1-1411 STPSLYPPPR R--------- ---------- ---------- ---------- ENSBTAP00000020995/1-1411 STPSLYPPPR R--------- ---------- ---------- ---------- 1451 1500 bmy_15372T0/1-1162 HHD BACU001055/1-1411 --- ENSTTRP00000011206/1-1162 --- ENSP00000316527/1-1411 --- ENSBTAP00000020995/1-1411 ---