KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:13:14 2014 Check: 00 .. Name: BACU006674/1-389 Len: 451 Check: 3210 Weight: 1.00 Name: ENSBTAP00000020997/1-360 Len: 451 Check: 2378 Weight: 1.00 Name: bmy_05697T0/1-369 Len: 451 Check: 9826 Weight: 1.00 Name: ENSTTRP00000005358/1-375 Len: 451 Check: 1976 Weight: 1.00 // 1 50 BACU006674/1-389 ---------- -----MATTF RASEHQHIRY NPLQDEWVLV SAHRMKRPWQ ENSBTAP00000020997/1-360 ---------- -----MATTF RASEHQHIRY NPLQDEWVLV SAHRMKRPWQ bmy_05697T0/1-369 ---------- -----MATTF RASEHQHIRY NPLQDEWVLV SAHRMKRPWQ ENSTTRP00000005358/1-375 LARGACPEQR QASEDAMATF RASEHQHIRY NPLQDEWVLV SAHRMKRPWQ 51 100 BACU006674/1-389 GQVEPPLLTT VPRHDPHNPL CPGATRANGE VNPHYEGTFL FDNDFPALQP ENSBTAP00000020997/1-360 GQVEHQPLTT VPRHDPHNPL CPGATRANGE VNPDYEGTFL FDNDFPALQP bmy_05697T0/1-369 GQVEPPLLTT VPRHDPHNPL CPGATRANGE VNPHYEGTFL FDNDFPALQP ENSTTRP00000005358/1-375 GQVEPPLLTT VPRHDPHNPL CPGATRANGE VNPHYEGTFL FDNDFPALQP 101 150 BACU006674/1-389 DAPSPGNLDL AAVSEGGAGP GRLGEHQHIR YNPLQDEWVL VSAHRMKRPW ENSBTAP00000020997/1-360 DAPSPGPSDH PLFQAEAAQ- ---GVCKVMC FHPWSD---- ---------- bmy_05697T0/1-369 DAPSPGPSDH PLFQAEAAR- ---GVCKVVC FHPWSD---- ---------- ENSTTRP00000005358/1-375 DAPSPGPSDH PLFQAEAAR- ---GVCKVMC FHPWSD---- ---------- 151 200 BACU006674/1-389 QGQVEPPLLT TVPRHDPHNP LCPGATRANG EVNPHYEGTF LFDNDFPALQ ENSBTAP00000020997/1-360 ---VTLPLMS ---------- ---------- ---------- ---------- bmy_05697T0/1-369 ---VTLPLMS ---------- ---------- ---------- ---------- ENSTTRP00000005358/1-375 ---VTLPLMS ---------- ---------- ---------- ---------- 201 250 BACU006674/1-389 PDAPSPVPEI RAVIDAWASV TEELGAQYPW V--------- ---------- ENSBTAP00000020997/1-360 ------VPEI RAVVDAWASV TEELGAQYPW VQIFENKGAM MGCSNPHPHC bmy_05697T0/1-369 ------VPEI RAVIDAWASV TEELGAQYPW VQIFENKGAM MGCSNPHPHC ENSTTRP00000005358/1-375 ------VPEI RAVVDAWASV TEELGAQYPW VQIFENKGAM MGCSNPHPHC 251 300 BACU006674/1-389 QVWASSFLPD VAQREERSQR AYQSQHGEPL LMEYGRQELL RKDRLVLTSE ENSBTAP00000020997/1-360 QVWASSFLPD VAQREERCQR AYQSQHGEPL LVEYGRQELL RKERLVLTSE bmy_05697T0/1-369 QVWASSFLPD VAQREERSQR AYQSQHGEPL LMEYGRQELL RKDRLVLTSE ENSTTRP00000005358/1-375 QVWASSFLPD VAQREERSQR AYQSQHGEPL LMEYGRQELL RKDRLVLTSE 301 350 BACU006674/1-389 HWLVLVPFWA VWPFQTLLLP RRHVRRLPEL TPAERD---- ---------- ENSBTAP00000020997/1-360 HWLVLVPFWA VWPFQTLLLP RRHVRRLPEL TPAERDDLSS IMKKLLTKYD bmy_05697T0/1-369 HWLVLVPFWA VWPFQTLLLP RRHVRRLPEL TPAERDDLAS IMKKLLTKYD ENSTTRP00000005358/1-375 HWLVLVPFWA VWPFQTLLLP RRHVRRLPEL TPAERDDLAS IMKKLLTKYD 351 400 BACU006674/1-389 ---------- ----GAPMGS EAGANWDHWQ LHAHYYPPLL RSATVRKFMV ENSBTAP00000020997/1-360 NLFETSFPYS MGWHGAPTGS EAGANWDHWQ LHAHYYPPLL RSATVRKFMV bmy_05697T0/1-369 NLFETSFPYS MGWHGAPTGT EAGANWDHWQ LHAHYYPPLL RSATVRKFMV ENSTTRP00000005358/1-375 NLFETSFPYS MGWHEAPIGS EAGANWDHWQ LHAHYYPPLL RSATVRKFMV 401 450 BACU006674/1-389 GYEMLAQAQR DLTPEQAAER LRALPEVHYR LGQKDGDSSH RLTTLTTGPS ENSBTAP00000020997/1-360 GYEMLAQAQR DLTPEQAAER LRALPEVHYR LGQKDRE--- ------TAAI bmy_05697T0/1-369 GYEMLAQAQR DLTPEQAAER LRALPEVHYR LGQKDGDSSH RLTTLTTGPS ENSTTRP00000005358/1-375 GYEMLAQAQR DLTPEQAAER LRALPEVHYR LGQKDRE--- ------TAAI 451 500 BACU006674/1-389 A ENSBTAP00000020997/1-360 A bmy_05697T0/1-369 A ENSTTRP00000005358/1-375 A