KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:13:15 2014 Check: 00 .. Name: ENSP00000341412/1-207 Len: 312 Check: 5218 Weight: 1.00 Name: ENSBTAP00000020999/1-242 Len: 312 Check: 3457 Weight: 1.00 Name: bmy_21987T0/1-245 Len: 312 Check: 4430 Weight: 1.00 Name: ENSTTRP00000000540/1-142 Len: 312 Check: 6949 Weight: 1.00 // 1 50 ENSP00000341412/1-207 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020999/1-242 ---------- ---------- ---------- ---------- ---------- bmy_21987T0/1-245 MVTDTRRFIP GDILGQIPEA SSSYRGVGRR FACMTSPRSS SPRAYKQVSC ENSTTRP00000000540/1-142 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000341412/1-207 ---------- ------MAVF HDMLLQPLGM FLCLSLQLSS ATFIRYSSTC ENSBTAP00000020999/1-242 ---------- ------MAIL RSLLL-PLGL LLCLWLLCSP ASCTNSTTNC bmy_21987T0/1-245 SSYPVPGPAV SKQIKTMAIL RSLLL-PLGL FLCLGLLCSP ASCINHNDNC ENSTTRP00000000540/1-142 ---------- ------MAIL GSLLL-PLGL FLCLGLLCSP ASCISHNGNC 101 150 ENSP00000341412/1-207 FTFDEYYTIT -LDIKASSHI YESNAVYSVF VPVNDSVYAV VMKTLDENSD ENSBTAP00000020999/1-242 KPFLSVTTKK SSLIHISPDI YKSNTLYTVS TQVSHGIISV VLEARDQNKS bmy_21987T0/1-245 TSFSKVIATT YSGIHANPNV YKSNTVYTVS VPVNNSISSV VLRAMDQHDS ENSTTRP00000000540/1-142 MLFNKHCATC -SGIHANPNV YKSNTVYTVS VPVNKNITSV ILRAIDQDNH 151 200 ENSP00000341412/1-207 SAGLWQRADK NCYSNSTYYV KDQYMTVLEA QWQAPEPENI TEVEIQAFTV ENSBTAP00000020999/1-242 VIGSWENPSD HCEGRAEYYL KGNFSTLFKA KWMSPNSTDI TTVKINIYTV bmy_21987T0/1-245 VIGSWQKADK YCNGSVLYHM KSPYSKLFEA KWVSPSSMNI TAVELQVFTV ENSTTRP00000000540/1-142 S-GSWQKADK YCSSSVLYHM KSRYSKLFEA KWVSPSFMNI TTVELQVFTV 201 250 ENSP00000341412/1-207 QI-------- ---------- ---------- ---------- RALPILSTLK ENSBTAP00000020999/1-242 NSLRNAELDS ITLPEVGTVT VKHVSTKQVI TTPTHKPTPA PPKPTTNPQK bmy_21987T0/1-245 DF-------- ---------- ---------- ---------- ---------- ENSTTRP00000000540/1-142 DF-------- ---------- ---------- ---------- ---------- 251 300 ENSP00000341412/1-207 LREKLSTLAL AAKIPQSSAF KPFFMITPKS IRLEGLANQV FSSPITEAIY ENSBTAP00000020999/1-242 TTTNHSIPTT SLPKPTTSLY TSHPKLTTTH ---KSSANRA FLCPVREAIQ bmy_21987T0/1-245 ---------- -----HNTAR VSFKMLKRNA ---KSSANRA FLSPMRDVIQ ENSTTRP00000000540/1-142 ---------- ------TTAR VSFKI----- ---------- ---------- 301 350 ENSP00000341412/1-207 ILLAFLTSTL LF ENSBTAP00000020999/1-242 ILFIFLIGTL LF bmy_21987T0/1-245 ILLVFLTSKL LF ENSTTRP00000000540/1-142 ---------- --