KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:16 2014 Check: 00 .. Name: ENSP00000312706/1-484 Len: 498 Check: 3602 Weight: 1.00 Name: ENSBTAP00000021022/1-498 Len: 498 Check: 6605 Weight: 1.00 Name: ENSTTRP00000004392/1-482 Len: 498 Check: 6302 Weight: 1.00 Name: bmy_05799T0/1-495 Len: 498 Check: 4223 Weight: 1.00 Name: BACU007986/1-412 Len: 498 Check: 9872 Weight: 1.00 // 1 50 ENSP00000312706/1-484 MPKKEKMAKT PLSDEKQLLL FQQKLLAEEE MAKKKERLLS QFLKDKLAKE ENSBTAP00000021022/1-498 MSKKGKKAKV PLSDEEQLLL FQQKLLAEEE MAKKKERLLN QFLKDKLAKE ENSTTRP00000004392/1-482 MSKKGKKAKM PLSDEEQLLL FQQKLLAEEE MAKKKERLLN QFLKDKLAKE bmy_05799T0/1-495 MSKKGKKAKM PLSDEEQLLL FQQKLLAEEE MAKKKERLLN QFLKDKLAKE BACU007986/1-412 ---------M PFSQNGNSVF PTQ------- ---------- ---------- 51 100 ENSP00000312706/1-484 EHNSALNLNK INTQWRTVLR EVKTRELHKD IEILSQTFER VVDCKDNVIK ENSBTAP00000021022/1-498 EHNSALNLNK INTQWRTVLR EIKTRELHKD IEILSQTFER VVDCKDSVIK ENSTTRP00000004392/1-482 EHNCALNLSK INTQWRTVLR EVKTRELHKD IEILSRTFER VVDCKDGVIK bmy_05799T0/1-495 EHNSALNLNK INTQWRTVLR EVKTRELHKD IEILSQTFER VVDCKDS--- BACU007986/1-412 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000312706/1-484 SLAKDLSEAE EQYAHALRSH LHNVDQLLAL QRHRLSLLEE SYNMELEALT ENSBTAP00000021022/1-498 SLAKDLSEAE EQHAHALRSH LHSIDQLLAL QRCRLNLLEE NYNMELEALT ENSTTRP00000004392/1-482 SLVKDLSEAE EQYAHALRSH LHNIDQLLAL QRRRLSLLEE SYNVELEALT bmy_05799T0/1-495 SLAKDLSEAE EQYAHALRSH LHNIDRLLAL QRCRLSLLEE SYNVELEALT BACU007986/1-412 SLAKDLSEAE EQYAHALRSH LHNIDRLLAL QRCRLSLLEE SYNVELEALT 151 200 ENSP00000312706/1-484 KEFETERKTI IDQHEKEIHY LQDIFMAMEQ NYIDSEYESK LEFQSMWNDL ENSBTAP00000021022/1-498 KEFETERKTI IDQHEKEIHY LQDVFMAMEQ NYIDSEYESK LEFQSMWDDL ENSTTRP00000004392/1-482 KEFETERKTI IDQHEKEIHY LQDVFVAMEQ NCLDSEYESK LEFQSMWEDL bmy_05799T0/1-495 KEFETERKTI IDQHEKEIHY LQDVFMAMEQ NCIDSEYESK LEFQSMWDDL BACU007986/1-412 KEFETERKTI IDQHEKEIHY LQDVFMAMEQ NCIDSEYESK LEFQSMWDDL 201 250 ENSP00000312706/1-484 KNMNLEEKHF LRLHLENRVE DLWRKFQDVL KNYTDATEDR KAAFETLQVK ENSBTAP00000021022/1-498 KNKNLEEKHF LRLQLENIVE DLWRRFQDAL KNYTDATEDR KIAFETLKVK ENSTTRP00000004392/1-482 KNKNLEEKHF LRLQLEHTVE DLWRRFQDAL KNYTDATEDR KIAFETLKAK bmy_05799T0/1-495 KNKNLEEKHF LRLQLEHKVE DLWRRFQDAL KNYTDATEDR KIAFETLKVK BACU007986/1-412 KNKNLEEKHF LRLQLEHKVE DLWRRFQDAL KNYTDATEDR KIAFETLKVK 251 300 ENSP00000312706/1-484 DEKSSKEIEV QMKKIQKLQD AITISKGKIM IHSRESEDEN RYIRNDKELV ENSBTAP00000021022/1-498 DEKSSREIEA QMKKIQKLQD SIIIFKGKIL VHSRESEEQN QDIREDKELV ENSTTRP00000004392/1-482 DEKSCKEIEA QMKKIQRLQD SIIILKGKIM VHGRESEEQN QDIREDKELV bmy_05799T0/1-495 DEKSSKEIEA QMKKIQRLQD SIIILKGKIM VHGRESEEQN QDIRDDKELV BACU007986/1-412 DEKSSKEIEA QMKKIQRLQD SIIILKGKIM VHGRESEEQN QNIRDDKELV 301 350 ENSP00000312706/1-484 LVQLRKLKAQ RTQARAASQK NLVRLTLESN ATLKALRKIV DKGEKILKLA ENSBTAP00000021022/1-498 LVQLRKLKAQ RTQARGIAQE NLVKLTLESS ATLKALREIV DKGEKILKLA ENSTTRP00000004392/1-482 LVQLRKLKAQ RTQARGISQE NLVKLTLESN ATLKALRKIV DKGEKVLKLA bmy_05799T0/1-495 LVQLRKLKAQ RTQARGISQE NLVKLTLESN AALKALRKIV DKGEKILKLA BACU007986/1-412 LVQLRKLKAQ RTQARGISQE NLVKLTLESN ATLKALRKIV DKGEKILKLA 351 400 ENSP00000312706/1-484 EICRKFETEE EKVLPFYSSV LTPKEQEGIQ KNNLEELTEE LTKVMVDYIG ENSBTAP00000021022/1-498 EICRKFETEE EKVLPFYSSV LTPKEQEEIE TMDLEEFNEE LGKVIMDYKG ENSTTRP00000004392/1-482 EICRKFETEE EKVLPFYSSV LTPEEQ---H KDNPEEFTEE LGKVIMDYIG bmy_05799T0/1-495 EICRKFETEE EKVLPFYSSV LTPEEQEEIE KIDPEEFNEE LGKVIMDYIG BACU007986/1-412 EICRKFETEE EKVLPFYSSV LTPEEQEEIE KTDPEEFNEE LGKVIMDYIG 401 450 ENSP00000312706/1-484 MENFWKRYNK VKLEQLSLQH RRAQLLDING KLREMLKQYL DGISVSDEVL ENSBTAP00000021022/1-498 MENFWKRYNK VKLEQLSLRH RRAQLLEINE KLREMLRQYL DGISVSDEVL ENSTTRP00000004392/1-482 MENFWKRYNK VKLEQLSLQH RRAQLLEINE KLREMLKQYL DGISVSDEVL bmy_05799T0/1-495 MENFWKRYNK VKLERLSLQH RRAQLLEINE KLREMLKQYL DGISVSDEVL BACU007986/1-412 MENFWKRYNK VKLERLSLQH RRAQLLEINE KLREMLKQYL DGISVSDEVL 451 500 ENSP00000312706/1-484 SQLNPLFIVN YQSNLLQPLS IRIAHPGDKQ HPTT------ -------- ENSBTAP00000021022/1-498 SQLNPLFIVN HRSNLPQLLP MPTAQPGDKK PPATYNIIEA AHVVSHTL ENSTTRP00000004392/1-482 SQLSPRFIVN QSRNLPQPPS MPTAQPGGQK PPATY----- -------- bmy_05799T0/1-495 SQLNPLFIVN HRSNLPQSPS TPTAQPGDKK TPTTYNIIEA AHVISHIL BACU007986/1-412 SQLNPLFIVN HRSNLPQPPS TPTAQPGDKK PPTTYNIIEA AHVISHIL