KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:17 2014 Check: 00 .. Name: ENSTTRP00000014453/1-326 Len: 805 Check: 1935 Weight: 1.00 Name: ENSP00000400713/1-409 Len: 805 Check: 3000 Weight: 1.00 Name: ENSBTAP00000021035/1-407 Len: 805 Check: 2546 Weight: 1.00 Name: bmy_15590T0/1-799 Len: 805 Check: 42 Weight: 1.00 Name: BACU002105/1-424 Len: 805 Check: 3565 Weight: 1.00 // 1 50 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---------- bmy_15590T0/1-799 MPMLKSLGVA DSKMSRAGTL PLRSSRNPFE EASGLEEEEA GERETLPNGT BACU002105/1-424 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---------- bmy_15590T0/1-799 SCRRRATLEK LAGLAPFRLG RTPGRRAGSP GDRQPRSFLG RVLTPGIRRS BACU002105/1-424 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---------- bmy_15590T0/1-799 SADFGLLARL QGARAHGDEE AAGEAARRLA FLRLGRGPKP RRASLAERVV BACU002105/1-424 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---------- bmy_15590T0/1-799 PAGEAAPEPP PKVPEPPKMK EPLSVLEILS LIQQRELARA DEHILELEAE BACU002105/1-424 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---------- bmy_15590T0/1-799 ELASSGGGSP GPPKVEGAGG GRRARDVALL YEALQREMWA LVRETLAGPG BACU002105/1-424 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---------- bmy_15590T0/1-799 PGAGAGAGAV AQLGQVLVQE EAADGRRGPE AARKLRARWA EAVARAARER BACU002105/1-424 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---------- bmy_15590T0/1-799 LEAAAPGAPG RLAGQLEALR GRLLEDMGVV RGRLAPSYPA GLGAFGVYLR BACU002105/1-424 ---------- ---------- ------MGVV RGRLAPSYPA GLGTFGVYLR 351 400 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ---------- ---------- ---------- ---------- ---MAALENG ENSBTAP00000021035/1-407 ---------- ---------- ---------- ---------- ---MVALENG bmy_15590T0/1-799 GYHGALAEWI GAAARRRLPL ADRYALLHWH NQVYPREVLG LVDMVALENG BACU002105/1-424 GYHGALAEWI GAAARRRLQL ADRYALLHWH NQVYPREVLG LVDMVALENG 401 450 ENSTTRP00000014453/1-326 ---------- ---------- ---------- ---------- ---------- ENSP00000400713/1-409 ELGPLLSPGT LRGLEDECVT DVKAQTRAAL LRVLQEDEEH WGSLEDQPSS ENSBTAP00000021035/1-407 ELGPLLSPGT LRGLEDECVT DVKAQTRAAL LRVLQEDGEH WGSTEDWSSN bmy_15590T0/1-799 ELGPLLSPGT LRGLEDECVT DVKAQTRAAL LRVLQEDEEH WGSAEDRSSS BACU002105/1-424 ELGPLLSPGT LRGLEDECVT DVKAQTRAAL LRVLQEDEEH WGSAEDWSSS 451 500 ENSTTRP00000014453/1-326 -------LLE EHTERAPRIS QEFGERMAHC CLGGLAEFLQ SFQQRVERFH ENSP00000400713/1-409 LAQDVCELLE EHTERAPRIS QEFGERMAHC CLGGLAEFLQ SFQQRVERFH ENSBTAP00000021035/1-407 LAQDVCELLE EHTERAPRIS QEFGERMAHC CLGGLAEFLQ SFQQRVERFH bmy_15590T0/1-799 LAQDVCELLE EHTERAPRIS QEFGERMAHC CLGGLAEFLQ SFQQRVERFH BACU002105/1-424 LAQDVCELLE EHTERAPRIS QEFGERMAHC CLGGLAEFLQ SFQQRVERFH 501 550 ENSTTRP00000014453/1-326 ENPGVRELLP DTYISRTISL VNCGPPLXXX XXXXXXXXXX XXXXXXXXXX ENSP00000400713/1-409 ENPAVREMLP DTYISKTIAL VNCGPPLRAL AERLARVGPP ESEPAREASA ENSBTAP00000021035/1-407 ENPGVRELPP DTYISRTISL VNCGPPLRAL AERLARVGPP ESEPAREAAA bmy_15590T0/1-799 ENPGVRELLP DTYISRTISL VNCGPPLRAL AERLARVGPP ESEPAREAAA BACU002105/1-424 ENPGVRELLP DTYISRTISL VNCGPPL--- ---------- ---------- 551 600 ENSTTRP00000014453/1-326 XXXXXXXXXX XXXXXXXXXX XXXPHFSKLM RRKWLSSSEA LDGIVGTLGA ENSP00000400713/1-409 SALDHVTRLC HRVVANLLFQ ELQPHFNKLM RRKWLSSPEA LDGIVGTLGA ENSBTAP00000021035/1-407 SALDRVIRLC HRILTDLLFQ ELQPHFSKLM RRKWLSSSEA LDGIVGTLGA bmy_15590T0/1-799 SALDRVTRLC HRILTDLLFQ ELQPHFSKLM RRKWLSSSEA LDGIVGTLGA BACU002105/1-424 ---------- ---------- ------SKLM RRKWLSSSEA LDGIVGTLGA 601 650 ENSTTRP00000014453/1-326 KALALRRMQD EPYQXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000400713/1-409 QALALRRMQD EPYQALVAEL HRRALVEYVR PLLRGRLRCS SARTRSRVAG ENSBTAP00000021035/1-407 KALALRRMQD EPYQALVAEL HRRALVEYVR PLFRGRLRCG SARTRSRVAG bmy_15590T0/1-799 KALALRRMQD EPYQELVAEL HRRALVEYVR PLFRGRLRCG SARTRSRVAG BACU002105/1-424 KALALRRMQD EPYQELVAEL HRRALVEYVR PLFRGRLRCG SARTRSRVAG 651 700 ENSTTRP00000014453/1-326 XXXXXXXXXX XXXXXXESQA SWLDAVVPRL AEVLHLEDTP SIQMEVGMLV ENSP00000400713/1-409 RLREDAAQLQ RLFRRLESQA SWLDAVVPHL AEVMQLEDTP SIQVEVGVLV ENSBTAP00000021035/1-407 RLREDAAQLE RLFRRLESQA SWLDAVVPRL AEVLRLEDTP SIQMEVGVLV bmy_15590T0/1-799 RLREDAAQLQ RLFRRLESQA SWLDAVVPRL AEVLHLEDTP SIQMEVGMLV BACU002105/1-424 RLREDAAQLQ RLFRRLESQA SWLDAVVPRL AEVLHLEDTP SIQMEVGMLV 701 750 ENSTTRP00000014453/1-326 RDYPDIRRKH VAALLDIRGL HHTVARHEIL AVARDLELSE GGTLSPPRDR ENSP00000400713/1-409 RDYPDIRQKH VAALLDIRGL RNTAARQEIL AVARDLELSE EGALSPPRDR ENSBTAP00000021035/1-407 RDYPDIRQKH VATLLDIRGL RHTAARQEIL AVTRDLELCE VAALSPPRDR bmy_15590T0/1-799 RDYPDIRRKH VAALLDIRGL HHTVTRHEIL AVARDLELSE GGTLSPPQDR BACU002105/1-424 RDYPDIRRKH VAALLDIRGL HHTVARHEIL AVARDLELSE GGTLSPPRDR 751 800 ENSTTRP00000014453/1-326 AFFADIPVPR PPFCLSLPLF LGRLSLSRWA -----CLP-- ---------- ENSP00000400713/1-409 AFFADIPVPR PSFCLSLPLF LGRLPLSRLA RPSLACLPRP RPPSL---AR ENSBTAP00000021035/1-407 AFFADIPVPR PPICLSLPLF LGRLTLSRLA -----CLPWP RPPAPSPLRR bmy_15590T0/1-799 AFFADIPVPR PPFCLSLPLF LGRLSLSRLA -----CLPWP RPPSPSL-SR BACU002105/1-424 AFFADIPVPR PPFCLSLPLF LGRLSLSRLA -----CLPWP RPPSPSP-SR 801 850 ENSTTRP00000014453/1-326 ----- ENSP00000400713/1-409 PRAQR ENSBTAP00000021035/1-407 PQARR bmy_15590T0/1-799 PRAQH BACU002105/1-424 PRAQH