KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:20 2014 Check: 00 .. Name: ENSP00000367595/1-272 Len: 275 Check: 860 Weight: 1.00 Name: bmy_21477T0/1-163 Len: 275 Check: 9347 Weight: 1.00 Name: ENSBTAP00000021078/1-258 Len: 275 Check: 5664 Weight: 1.00 Name: BACU001138/1-265 Len: 275 Check: 9857 Weight: 1.00 Name: ENSTTRP00000003221/1-174 Len: 275 Check: 827 Weight: 1.00 // 1 50 ENSP00000367595/1-272 MLQLRDSVDS AGTSPTAVLA AGEEVG---A GGGPGGGRPG AGTPLRQTLW bmy_21477T0/1-163 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021078/1-258 ---------- -------XLA AGEEVGPGSG GGGGGGGRPG VGTPLRQTLW BACU001138/1-265 MSPPSSAASD SGWSELPVPT RCSHSP---A LTSPTHSQQS VQAPGRKA-- ENSTTRP00000003221/1-174 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000367595/1-272 PLSIHDPTRR ARVKEYFVFR PGSIEQAVEE IRVVVRPVED GEIQGVWLLT bmy_21477T0/1-163 ---------- ---------- ---IEQAVEE IRVVVRPVED GDIQGVWLLT ENSBTAP00000021078/1-258 PLSVHDPTRR ARVKEYFVFR PGTIEQAVEE IRVVVRPVED GDIQGVWLLT BACU001138/1-265 -----STLPR QQRLISEMQQ PGTIEQAVEE IRVVVRPVED GDIQGVWLLT ENSTTRP00000003221/1-174 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000367595/1-272 EVDHWNNEKE RLVLVTEQSL LICKYDFISL QCQQVVRIAL NAVDTISYGE bmy_21477T0/1-163 EVDHWNNEKE RLVLITDQAL LICKYDFISL QCQQVVRVAL NAVDTISYGE ENSBTAP00000021078/1-258 EVDHWNNEKE RLVLITDQAL LICKYDFISL QCQQVVRVAL NAVDTISYGE BACU001138/1-265 EVDHWNNEKE RLVLITDQAL LICKYDFISL QCQQVVRVAL NAVDTISYGE ENSTTRP00000003221/1-174 -VDHWNNEKE RLVLITVQAL LICKYDFISL QCQQVVRVAL NAVDTISYGE 151 200 ENSP00000367595/1-272 FQFPPKSLNK REGFGIRIQW DKQSRPSFIN RWNPWSTNVP YATFTEHPMA bmy_21477T0/1-163 FQFPPKSLNK ---------- ---VRPV--- ---------- ---------- ENSBTAP00000021078/1-258 FQFPPKSLNK REGFGIRIQW DKQSRPSFIS RWNPWSTSVP YTTFIEHPMA BACU001138/1-265 FQFPPKSLNK REGFGIRIQW DKQSRPSFIS RWNPWSTNVP YTTFIEHPMA ENSTTRP00000003221/1-174 FQFPPKSLNK REGFGIRIQW DKQSRPSFIS RWNPWSTNVP YTTFIEHPMA 201 250 ENSP00000367595/1-272 GADEKTASLC QLESFKALLI QAVKKAQKES PLPGQANGVL ILERPLLIET bmy_21477T0/1-163 ---RTGCGQS QLDGFKALLT QAVKKAQKES PLPGQAGGVL VLECPLLIET ENSBTAP00000021078/1-258 GVDEKTASLC QLDGFKALLI QAVKKAQKES PLPGQEGGVL VLECPLLIET BACU001138/1-265 GVDEKTASLC QLDGFKALLI QAVKKAQKES PLPGQDGGVL VLECPLLIET ENSTTRP00000003221/1-174 GMDEKTASLC QLDGFKALLI QAVKKAQKES PLPGQAGGVL VLECPLLIET 251 300 ENSP00000367595/1-272 YVGLMSFINN EAKLGYSMTR GKIGF bmy_21477T0/1-163 YVGLMSFINN EAKLGYSMTR GKIGF ENSBTAP00000021078/1-258 YVGLMSFINN EAKLGYSMTR GKIGF BACU001138/1-265 YVGLMSFINN EAKLGYSMTR GKIGF ENSTTRP00000003221/1-174 YVGLMSFINN EAKLGYSMTR GKIGF