KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:21 2014 Check: 00 .. Name: ENSTTRP00000003073/1-708 Len: 974 Check: 9394 Weight: 1.00 Name: bmy_19161T0/1-915 Len: 974 Check: 5402 Weight: 1.00 Name: ENSP00000364277/1-961 Len: 974 Check: 491 Weight: 1.00 Name: BACU011803/1-953 Len: 974 Check: 6657 Weight: 1.00 Name: ENSBTAP00000021084/1-960 Len: 974 Check: 9880 Weight: 1.00 // 1 50 ENSTTRP00000003073/1-708 ---------- ---------- ---------- ---------- ---------- bmy_19161T0/1-915 ---------- ---------- ------MPA- -----DIQEI NVLITKNSCL ENSP00000364277/1-961 MHGHRAPGGA GPSEPEHPAT NPPGAAPPAC ADSDPGASEP GLLARRGSGS BACU011803/1-953 ---------- ---------- METSAAPPAY ADSDPGASEP GLPVPRGSGS ENSBTAP00000021084/1-960 MHGHRAPGGA GPSEPEHPTA NSPGAASPAY ADSDPGASEP GLPVPRGSGS 51 100 ENSTTRP00000003073/1-708 ---------- ---------- ---------- ---------- ---------- bmy_19161T0/1-915 LLKT--ASHN PGPGSPSDGW GEGFPERQCG QERG------ -----SGKPD ENSP00000364277/1-961 ALGGPLDPQF VGPSDTSLGA APGHRVLPCG PSPQHHRALR FSYHLEGSQP BACU011803/1-953 ALGSLLDPQF AGPSDASLGV APGPRVLPCG PSPQHHRALR FSYHLEGSQP ENSBTAP00000021084/1-960 ALGSLLDPQF AGPSDTSLGV APGPRVLPCG PSPQHHRALR FSYHLEGSQP 101 150 ENSTTRP00000003073/1-708 ---LHQGNRI LVKSLSLDPG QSLEPHPEGP QRLRSDPGPP TETPSQRPSP bmy_19161T0/1-915 TTGLHQGNRI LVKSLSLDPG QSLEPHPEGP QRLRSDPGPP TETPSQRPSP ENSP00000364277/1-961 RPGLHQGNRI LVKSLSLDPG QSLEPHPEGP QRLRSDPGPP TETPSQRPSP BACU011803/1-953 RPGLHQGNRI LVKSLSLDPG QSLEPHPEGP QRLRSDPGPP TAAPSQRPSP ENSBTAP00000021084/1-960 RPGMHQGNRI LVKSLSLDPG QGLEPHPEGP QRLRSDPGPP TETPSQRPSP 151 200 ENSTTRP00000003073/1-708 LKRAPGPKPQ VPPKPSYLQM PRMPPPPEPI PPPPSRPLPA DPRVAKGLAS bmy_19161T0/1-915 LKRAPGPKPQ VPPKPSYLQM PRMPPPPEPI PPPPSRPLPA DPRVAKGLAS ENSP00000364277/1-961 LKRAPGPKPQ VPPKPSYLQM PRMPPPLEPI PPPPSRPLPA DPRVAKGLAP BACU011803/1-953 LKRAPGPKPQ VPPKPSYLQM PRMPPPPEPI PPPPSRPLPA DPRVAKGLVS ENSBTAP00000021084/1-960 LKRAPGPKPQ VPPKPSYLQM PRMPPPPEPI PPPPSRPLPA DPRVAKGLAS 201 250 ENSTTRP00000003073/1-708 RAEASLSSAA VSSLIEKFER EPVIVASDRP APGPSPGPAE PATLPQPPLQ bmy_19161T0/1-915 RAEASLSSAA VSSLIEKFER EPVIVASDRP APGPSPGPAE PAMLPQPPLQ ENSP00000364277/1-961 RAEASPSSAA VSSLIEKFER EPVIVASDRP VPGPSPGPPE PVMLPQPTSQ BACU011803/1-953 RAEASLSSAA VSSLIEKFER EPVIVASDRP APGPSPGPAE PAMLPQPPLQ ENSBTAP00000021084/1-960 RTEASPSSAA VSSLIEKFER EPVIVASDRP APGPSPSPTE PAMLPQPPPQ 251 300 ENSTTRP00000003073/1-708 PPVPQLPESE ASRCLFLLAP GPRDGE-VPN RDSGIDSISS XXXXXXXXXX bmy_19161T0/1-915 PPVPQLPEGE ASRCLFLLAP GPRDGEKVPN RDSGIDSISS PSNSEETCFI ENSP00000364277/1-961 PPVPQLPEGE ASRCLFLLAP GPRDGEKVPN RDSGIDSISS PSNSEETCFV BACU011803/1-953 PPVPQLPEGE ASRCLFLLAP GPRDGEKVPN RDSGIDSISS PSNSEETCFI ENSBTAP00000021084/1-960 PPVPQLPEGE ASRCLFLLAP GPRDGEKVPN RDSGIDSISS PSNSEETCFI 301 350 ENSTTRP00000003073/1-708 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19161T0/1-915 SDDGPPSHSL CPGLPALASV PVALADPHRP SSQEVDSDLE EEDD-EEEDE ENSP00000364277/1-961 SDDGPPSHSL CPGPPALASV PVALADPHRP GSQEVDSDLE EEDDEEEEEE BACU011803/1-953 SDDGPPSHSL CPGLPALASV PVALADPHRP SSQEVDSDLE EEDD-EEEDE ENSBTAP00000021084/1-960 SDDGPPSHGL CPGPPALASV PVALADPHRP SSQEVDSDLE EEDD-EEEDE 351 400 ENSTTRP00000003073/1-708 XXXXXXXXXX XXXXXXXLTV QQKVFHIANE LLQTEKAYVS RLHLLDQ--- bmy_19161T0/1-915 KDREIPVPPM ERQESVELTV QQKVFHIANE LLQTEKAYVS RLHLLDQ--- ENSP00000364277/1-961 KDREIPVPLM ERQESVELTV QQKVFHIANE LLQTEKAYVS RLHLLDQ--- BACU011803/1-953 KDREIPVPPM ERQEAVELTV QQKVFHIANE LLQTEKAYVS RLHLLDQVNG ENSBTAP00000021084/1-960 KDREVPAPLV ERQESVELTV QQKVFHIANE LLQTEKAYVS RLHLLDQ--- 401 450 ENSTTRP00000003073/1-708 ---------- VFCARLLEEA RNRSSFPADV VHGIFSNICS IYCFHQQFLL bmy_19161T0/1-915 ---------- VFCARLLEEA RNRSSFPADV VHGIFSNICS IYCFHQQFLL ENSP00000364277/1-961 ---------- VFCARLLEEA RNRSSFPADV VHGIFSNICS IYCFHQQFLL BACU011803/1-953 PSGVPGHQDL VFCARLLEEA RNRSSFPADV VHGIFSNICS IYCFHQQFLL ENSBTAP00000021084/1-960 ---------- VFCARLLEEA RNRSSFPADV VHGIFSNICS IYCFHQQFLL 451 500 ENSTTRP00000003073/1-708 PELEKRMEEW DRYPRIGDIL QKLAPFLKMY GEYVKNFDRA VELVNTWTER bmy_19161T0/1-915 PELEKRMEEW DRYPRIGDIL QKLAPFLKMY GEYVKNFDRA VELVNTWTER ENSP00000364277/1-961 PELEKRMEEW DRYPRIGDIL QKLAPFLKMY GEYVKNFDRA VELVNTWTER BACU011803/1-953 PELEKRMEEW DRYPRIGDIL QKLAPFLKMY GEYVKNFDRA VELVNTWTER ENSBTAP00000021084/1-960 PELEKRMEEW DRYPRIGDIL QKLAPFLKMY GEYVKNFDRA VELVNTWTER 501 550 ENSTTRP00000003073/1-708 STQFKVIIHE VQKEEACGNL TLQHHMLEPV QRIPRYELLL KDYLLKLPHG bmy_19161T0/1-915 STQFKVIIHE VQKEEACGNL TLQHHMLEPV QRIPRYELLL KDYLLKLPHG ENSP00000364277/1-961 STQFKVIIHE VQKEEACGNL TLQHHMLEPV QRIPRYELLL KDYLLKLPHG BACU011803/1-953 STQFKVIIHE VQKEEACGNL TLQHHMLEPV QRIPRYELLL KDYLLKLPHG ENSBTAP00000021084/1-960 STQFKVIIHE VQKEEACGNL TLQHHMLEPV QRIPRYELLL KDYLLKLPHG 551 600 ENSTTRP00000003073/1-708 SPDSKDAQKS LELIATAAEH SNAAIRKMER MHKLLKVYEL LGGEEDIVSP bmy_19161T0/1-915 SPDSKDAQKS LELIATAAEH SNAAIRKMER MHKLLKVYEL LGGEEDIVSP ENSP00000364277/1-961 SPDSKDAQKS LELIATAAEH SNAAIRKMER MHKLLKVYEL LGGEEDIVSP BACU011803/1-953 SPDSKDAQKS LELIATAAEH SNAAIRKMER MHKLLKVYEL LGGEEDIVSP ENSBTAP00000021084/1-960 SPDSKDAQKS LELIATAAEH SNAAIRKMER MHKLLKVYEL LGGEEDIVSP 601 650 ENSTTRP00000003073/1-708 TKELIKEGHI LKLSAKNGTT QDRYLILFND RLLYCVPRLR LLGQKFSVRA bmy_19161T0/1-915 TKELIKEGHI LKLSAKNGTT QDRYLILFND RLLYCVPRLR LLGQKFSVRA ENSP00000364277/1-961 TKELIKEGHI LKLSAKNGTT QDRYLILFND RLLYCVPRLR LLGQKFSVRA BACU011803/1-953 TKELIKEGHI LKLSAKNGTT QDRYLILFND RLLYCVPRLR LLGQKFSVRA ENSBTAP00000021084/1-960 TKELIKEGHI LKLSAKNGTT QDRYLILFND RLLYCVPRLR LLGQKFSVRA 651 700 ENSTTRP00000003073/1-708 RIDVDGMEXX XXXXXXXXXX XXXXXXXXXX XXXXXTEEEK KDWVQAINST bmy_19161T0/1-915 RIDVDGMELK ESSNLNLPRT FLVSGKQRSL ELQARTEEEK KDWVQAINST ENSP00000364277/1-961 RIDVDGMELK ESSNLNLPRT FLVSGKQRSL ELQARTEEEK KDWVQAINST BACU011803/1-953 RIDVDGMELK ESSNLNLPRT FLVSGKQRSL ELQARTEEEK KDWVQAINST ENSBTAP00000021084/1-960 RIDVDGMELK ESSNLNLPRT FLVSGKQRSL ELQARTEEEK KDWVQAINST 701 750 ENSTTRP00000003073/1-708 LLKHEQTLET FKLLNSTNRE DEDTPPNSPN VDLGKRAPTP IREKEVTMCM bmy_19161T0/1-915 LLKHEQTLET FKLLNSTNRE DEDTPPNSPN VDLGKRAPTP IREKEVTMCM ENSP00000364277/1-961 LLKHEQTLET FKLLNSTNRE DEDTPPNSPN VDLGKRAPTP IREKEVTMCM BACU011803/1-953 LLKHEQTLET FKLLNSTNRE DEDTPPNSPN VDLGKRAPTP IREKEVTMCM ENSBTAP00000021084/1-960 LLKHEQTLET FKLLNSTNRE DEDTPPNSPN VDLGKRAPTP IREKEVTMCM 751 800 ENSTTRP00000003073/1-708 RCQEPFNSIT KRRHHCKACG HVVCGKCSEF RARLVYDNNR SNRVCTDCYV bmy_19161T0/1-915 RCQEPFNSIT KRRHHCKACG HVVCGKCSEF RARLVYDNNR SNRVCTDCYV ENSP00000364277/1-961 RCQEPFNSIT KRRHHCKACG HVVCGKCSEF RARLVYDNNR SNRVCTDCYV BACU011803/1-953 RCQEPFNSIT KRRHHCKACG HVVCGKCSEF RARLVYDNNR SNRVCTDCYV ENSBTAP00000021084/1-960 RCQEPFNSIT KRRHHCKACG HVVCGKCSEF RARLVYDNNR SNRVCTDCYV 801 850 ENSTTRP00000003073/1-708 ALHGVPGSSP ACSQHTPQRR RSILE----- ---------- ---------- bmy_19161T0/1-915 ALHGVPGSSP ACSQHTPQRR RSILEKQASV AAENSVICSF LHYMEKGGKG ENSP00000364277/1-961 ALHGVPGSSP ACSQHTPQRR RSILEKQASV AAENSVICSF LHYMEKGGKG BACU011803/1-953 ALHGVPGSSP ACSQHTPQRR RSILEKQASV AAENSVICSF LHYMEKGGKG ENSBTAP00000021084/1-960 ALHGVPGSSP ACSQHTPQRR RSILEKQASV AAENSVICSF LHYMEKGGKG 851 900 ENSTTRP00000003073/1-708 ---------- ---------- ---------- ---------- ---------- bmy_19161T0/1-915 WHKAWFVVPE NEPLVLYIYG APQDVKAQRS LPLIGFEVGP PEAGERPDRR ENSP00000364277/1-961 WHKAWFVVPE NEPLVLYIYG APQDVKAQRS LPLIGFEVGP PEAGERPDRR BACU011803/1-953 WHKAWFVVPE NEPLVLYIYG APQDVKAQRS LPLIGFEVGP PEAGERPDRR ENSBTAP00000021084/1-960 WHKAWFVVPE NEPLVLYIYG APQDVKAQRS LPLIGFEVGP PEAGERPDRR 901 950 ENSTTRP00000003073/1-708 ---------- ---------- ---------- ---------- ---------- bmy_19161T0/1-915 HVFKITQSHL SWYFSPETEE LQRRWMAVLG RAGRGDTFCP GPTLSEDREM ENSP00000364277/1-961 HVFKITQSHL SWYFSPETEE LQRRWMAVLG RAGRGDTFCP GPTLSEDREM BACU011803/1-953 HVFKITQPHL SWYFSPETEE LQRRWMAVLG RAGRGDTFCP GPTLSEDREM ENSBTAP00000021084/1-960 HVFKITQSHL SWYFSPETEE LQRRWMAVLG RAGRGDTFCP GPTLSEDREM 951 1000 ENSTTRP00000003073/1-708 ---------- ---------- ---- bmy_19161T0/1-915 EEAPVAASGA TAEPSEAPQT RDKT ENSP00000364277/1-961 EEAPVAALGA TAEPPESPQT RDKT BACU011803/1-953 EEAPVAASGA TAEPSEAPQT RDKT ENSBTAP00000021084/1-960 EEVPVAASGA TAEPSEAPQT RDKT