KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:25 2014 Check: 00 .. Name: ENSBTAP00000021132/1-282 Len: 309 Check: 4476 Weight: 1.00 Name: ENSP00000361926/1-278 Len: 309 Check: 7757 Weight: 1.00 Name: ENSTTRP00000006598/1-278 Len: 309 Check: 8332 Weight: 1.00 Name: bmy_00070T0/1-309 Len: 309 Check: 9502 Weight: 1.00 Name: BACU017978/1-286 Len: 309 Check: 6217 Weight: 1.00 // 1 50 ENSBTAP00000021132/1-282 MEPLPEPASG PRPRPHRR-- ILLPLLIFYL ILMPKSPYGL MKSRADEVER ENSP00000361926/1-278 MDSMPEPAS- -------RCL LLLPLLLLLL LLLPAPELGP SQAGAEENDW ENSTTRP00000006598/1-278 MEPLPEPAS- -------RCL LLLPLLLLLL LLLAAPELGP RQARAEETDW bmy_00070T0/1-309 MELLPEPASR PRPGPRPRCL LLLPLLLLLL LLLAAPELGP RQARAEETDW BACU017978/1-286 MELLPEPASR PRPGPRPRCL LLLPLLLLLL LLLAAPELGP RQARAEETDW 51 100 ENSBTAP00000021132/1-282 SRLPAKTPVC KYVAVELKSA FEETGKTKEV IDTGYGILDR KASGVKYTKS ENSP00000361926/1-278 VRLPSKCEVC KYVAVELKSA FEETGKTKEV IGTGYGILDQ KASGVKYTKS ENSTTRP00000006598/1-278 VRLPSKCEVC KYVAVELKSA FEETGKTKEV IDMGYGILDR KTSGVKYTKS bmy_00070T0/1-309 VRLPSKCEVC KYVAVELKSA FEETGKTKEV IDMGYGILDR KTSGVKYTKS BACU017978/1-286 VRLPSKCEVC KYVAVELKSA FEETGKTKEV IDMGYGILDR KTSGVKYTKS 101 150 ENSBTAP00000021132/1-282 DLRLIEVTET ICKRLLDYSL HKERTGSNRF AK-------- ---------- ENSP00000361926/1-278 DLRLIEVTET ICKRLLDYSL HKERTGSNRF AK-------- ---------- ENSTTRP00000006598/1-278 DLRLIEVTET ICKRLLDYSL HKERTGSNRF AK-------- ---------- bmy_00070T0/1-309 DLRLIEVTET ICKRLLDYSL HKERTGSNRF AKLHWERRGQ GEEGSLPLMS BACU017978/1-286 DLRLIEVTET ICKRLLDYSL HKERTGSNRF AK-------- ---------- 151 200 ENSBTAP00000021132/1-282 -----GMSET FETLHNLVHK GVKVVMDIPY ELWNETSAEV ADLKKQCDVL ENSP00000361926/1-278 -----GMSET FETLHNLVHK GVKVVMDIPY ELWNETSAEV ADLKKQCDVL ENSTTRP00000006598/1-278 -----GMSET FETLHNLVHK GVKVVMDIPY ELWNETSAEV ADLKKQCDVL bmy_00070T0/1-309 GRLFQGMSET FETLHSLVHK GVKVVMDIPY ELWNETSAEV ADLKKQCDVL BACU017978/1-286 -----GMSET FETLHNLVHK GVKVVMDIPY ELWNETSAEV ADLKKQCDVL 201 250 ENSBTAP00000021132/1-282 VEEFEEVIED WYRNHQEEDL TQFLCANHVL KGKDASCLAE QWSGKKGDTA ENSP00000361926/1-278 VEEFEEVIED WYRNHQEEDL TEFLCANHVL KGKDTSCLAE QWSGKKGDTA ENSTTRP00000006598/1-278 VEEFEEVIED WYRNHQEEDL TQFLCANHVL KGKDTSCLAE RWSGKKGDTA bmy_00070T0/1-309 VEEFEEVIED WYRNHQEEDL TQFLCANHVL KGKDTSCLAE RWSGKKGDTA BACU017978/1-286 VEEFEEVIED WYRNHQEEDL TQFLCANHVL KGKDTSCLAE RWSGKKGDTA 251 300 ENSBTAP00000021132/1-282 ALGGKKSKKK SGRAKGLGGG S--SKQRKEL GDLDGDPSPE EDEGIQKASP ENSP00000361926/1-278 ALGGKKSKKK SSRAKAAGGR SSSSKQRKEL GGLEGDPSPE EDEGIQKASP ENSTTRP00000006598/1-278 ALGGKKSKKK SGRTKASGGS SGGSKQRKEL GGLEGDPSPE EDEGIQKPSP bmy_00070T0/1-309 TLGGKKSKKK SGRAKASGGG SSGSKQRKEL RGLEGDPSPE EDEGIQKASP BACU017978/1-286 ALGGKKSKKK SGRAKASGGS SSGSKQRKEL GGLEGDPSPE EDEGIQKASP 301 350 ENSBTAP00000021132/1-282 LTHSPPDEL ENSP00000361926/1-278 LTHSPPDEL ENSTTRP00000006598/1-278 LTRGAPEEL bmy_00070T0/1-309 LTRGPTEEL BACU017978/1-286 LTRGPPEEL