KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:26 2014 Check: 00 .. Name: ENSP00000423161/1-519 Len: 527 Check: 1708 Weight: 1.00 Name: ENSBTAP00000021145/1-522 Len: 527 Check: 6987 Weight: 1.00 Name: ENSTTRP00000001859/1-521 Len: 527 Check: 5349 Weight: 1.00 Name: bmy_05122T0/1-506 Len: 527 Check: 2499 Weight: 1.00 Name: BACU014725/1-522 Len: 527 Check: 5419 Weight: 1.00 // 1 50 ENSP00000423161/1-519 MSYPQFGYPY SSAPQFLMAT NSLSTCCESG GRTLADSGPA ASAQAPVYCP ENSBTAP00000021145/1-522 MSYPQFGYPY SSAPQFLMTT NSLSTCCESG GRTLADSGPA ASAQAPVYCP ENSTTRP00000001859/1-521 MSYPQFEY-Y SSAPQFLMTT NSLSTCCESG GRTLADSRPA ASAQAPVYCP bmy_05122T0/1-506 ---------- -------MTT NSLSTCCESG GRTLAESRPA ASAQAPVYCP BACU014725/1-522 MSYPQFGYPY SSAPQFLMTT NSLSTCCESG GRTLAESRPA ASAQAPVYCP 51 100 ENSP00000423161/1-519 VYESRLLATA RHELNSAAAL GVYGGPYGGS QGYGNYVTYG SEASAFYSLN ENSBTAP00000021145/1-522 VYESRLLATA RHELNSAAAL GVYGGPYGGS QGYGNYVTYG SEASAFYSLN ENSTTRP00000001859/1-521 VYESRLLATA RHELNSAAAL GVYGGPYGGS QGYGNYVTYG SEASAFYSLN bmy_05122T0/1-506 VYESRLLATA RHELNSAAAL GVYGGPYGGS QGYGNYVTYG SEASAFYSLN BACU014725/1-522 VYESRLLATA RHELNSAAAL GVYGGPYGGS QGYGNYVTYG SEASAFYSLN 101 150 ENSP00000423161/1-519 SFDSKDGSGS AHGGLAPAAA -AYYPYEPAL GQYPYDRYGT MDSGTRRKNA ENSBTAP00000021145/1-522 SFDSKDAPGS AHAGLAPAAA -AYYPYEPAL GQYPYDRYGT MDSGTRRKNA ENSTTRP00000001859/1-521 SFDSKDAPGS AHAGLAPAAA TAYYPYEPAL GQYPYDRYGT MDSGTRRKNA bmy_05122T0/1-506 SFDSKDAPGS AHAGLAPAAA TAYYPYEPAL GQYPYDRYGT MDSGTRRKNA BACU014725/1-522 SFDSKDAPGS AHAGLAPAAA TACYPYEPAL GQFSYDRYGT MDSGTRRKNA 151 200 ENSP00000423161/1-519 TRETTSTLKA WLQEHRKNPY PTKGEKIMLA IITKMTLTQV STWFANARRR ENSBTAP00000021145/1-522 TRETTSTLKA WLQEHRKNPY PTKGEKIMLA IITKMTLTQV STWFANARRR ENSTTRP00000001859/1-521 TRETTSTLKA WLQEHRKNPY PTKGEKIMLA IITKMTLTQV STWFANARRR bmy_05122T0/1-506 TRETTSTLKA WLQEHRKNPY PTKGEKIMLA IITKMTLTQV STWFANARRR BACU014725/1-522 TRETTSTLKA WLQEHRKNPY PTKGEKIMLA IITKMTLTQV STWFANARRR 201 250 ENSP00000423161/1-519 LKKENKMTWP PRNKCADEKR PYAEGEEEEG GEEEAREEPL KSSKNAEPVG ENSBTAP00000021145/1-522 LKKENKMTWP PRNKCADEKR PYAEGEEEEG GEEEGRGQPL KSTKVEEPIG ENSTTRP00000001859/1-521 LKKENKMTWP PRNKCADEKR PYAEGEEEEG GEEEARAQPL KSTKGAEPTD bmy_05122T0/1-506 LKKENKMTWP PRNKCADEKR PYAEGEEEEG GEEEAREQPL KSTKGAEPIG BACU014725/1-522 LKKENKMTWP PRNKCADEKR PYAEGEEEEG GEEETREQPL KSTKGAEPIG 251 300 ENSP00000423161/1-519 KEEKELELSD LDDFDPLEAE PPACELKPPF HSLDGGLERV PAAPDGPV-- ENSBTAP00000021145/1-522 K-GKDLELSD LEDFDPLEGE PPECELKPPF QPLDGGLDRI PTGPEGPSAP ENSTTRP00000001859/1-521 K-EKDLELSD LEDFDPLEGE PPECELKPPF QPLDGGLDRV PAVPDGPSAP bmy_05122T0/1-506 K-EKDLELSD LEDFDPLEGE PPECELKPPF QPLDGGLDRV PTVPDGPSAP BACU014725/1-522 K-EKDLELSD LEDFDPLEGE PPECELKPPF QPLDGGLDRV PTVPDGPSAP 301 350 ENSP00000423161/1-519 -KEASGALRM SL-AAGGGAA LDEDLERARS CLRSAAAGPE PL--PGAEGG ENSBTAP00000021145/1-522 GKEAPGALRL PL-AAGGGAA LDQDLERARS CLRSAAAVPE QPAGAGAGGG ENSTTRP00000001859/1-521 GKEAPGALRM PL-AAGGGAT LDQDLERARS CLRSTAARPE HQAGAGAGVG bmy_05122T0/1-506 GKEAPGALRM PLAAAGGGAT LDQDLERARS CLRSTAAGPE HQAGAGAGVG BACU014725/1-522 GKEAPGALRM PL-AAGGGAT LDQDLERARG CLRSTAAGPE HQAGAGAGVG 351 400 ENSP00000423161/1-519 PQVCEAKLGF VPAGASAGLE AKPRIWSLAH TATAAAAAAT SLSQTEFPSC ENSBTAP00000021145/1-522 PQVCESKLGF APSGASAGLE AKPRIWSLAH TAT--AATAT AFSQTEFPSC ENSTTRP00000001859/1-521 PQACEPKLGF APAGASAGLE AKPRIWSLAH TAT--AAAAT ALGQTEFPSC bmy_05122T0/1-506 PQACEPKLGF APAGASAGLE AKPRIWSLAH TAT--AAAAT ALGQTEFPSC BACU014725/1-522 PQACEPKLGF APAGASAGLE AKPRIWSLAH TAT--AAAAT ALGQTEFPSC 401 450 ENSP00000423161/1-519 MLKRQG-PAA PAAVSSAPAT SPSVALPHSG ALDRHQDSPV TSLRNWVDGV ENSBTAP00000021145/1-522 MLKRQGPPAG PAAPSSAPAS SSPAAPAPAG ALDRHQDSPV TSLRNWVDGV ENSTTRP00000001859/1-521 MLKRRG-PAG PAAPSSAPAS SSPATPAPAG ALDRHQDSPV TSLRNWVDGV bmy_05122T0/1-506 MLKRQG-PAG PAAPSSAPTS SSPAAPAPAG ALDRHQDSPV TSLRNWVDGV BACU014725/1-522 MLKRQG-PAG SAAPSSAPTS SSPAAPAPTG ALDRHQDSPV TSLRNWVDGV 451 500 ENSP00000423161/1-519 FHDPILRHST LNQAWATAKG ALLDPGPLGR SLGAGANVLT APLARAFPPA ENSBTAP00000021145/1-522 FHDPILRHST LNQAWATAKS ALLDRGPLGR SLGAGASVLT TPLARPFPPA ENSTTRP00000001859/1-521 FHDPILRHST LNQAWASAKG ALLDPGPLGR SLAGGANVLT TPLARSFPPA bmy_05122T0/1-506 FHDPILRHST LNQAWATAKS ALLDPGPLGR SLGGGANVLT SPLARSFPPA BACU014725/1-522 FHDPILRHST LNQAWATAKG ALLDPGPLGR SLGGGANVLT MPLARSFPPA 501 550 ENSP00000423161/1-519 VPQDAPAAGA ARELLALPKA GGKPFCA ENSBTAP00000021145/1-522 APPDDPAAGA TKDLLAVPKA GGKPFCA ENSTTRP00000001859/1-521 APQDAPASGA AKELLATPKA GGKPFCA bmy_05122T0/1-506 APQDAPASGA AKELLATPKA GGKPFCA BACU014725/1-522 APQDAPASGA AKELLATPKA GGKPFCA