KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:29 2014 Check: 00 .. Name: ENSP00000311453/1-829 Len: 1031 Check: 1064 Weight: 1.00 Name: ENSBTAP00000021155/1-836 Len: 1031 Check: 716 Weight: 1.00 Name: bmy_18678T0/1-792 Len: 1031 Check: 7476 Weight: 1.00 Name: BACU016055/1-890 Len: 1031 Check: 3394 Weight: 1.00 Name: ENSTTRP00000003792/1-830 Len: 1031 Check: 1827 Weight: 1.00 // 1 50 ENSP00000311453/1-829 MGCAPSIHIS ERL------- VAEDAPSPAA PPLSSGGPRL PQGQKTA--A ENSBTAP00000021155/1-836 MGCAPSIHIS ESRGVYPGGK EAEDVPGPAA APLPPGGPSL PPGQKTA--A bmy_18678T0/1-792 INAVTLFDLL DHT------- ---------- ---------- PSEILALASN BACU016055/1-890 MGCAQSIHAS ESREVYHGGN EAEDAPGPTA PPLQPGGPRL PPGPPTXXXX ENSTTRP00000003792/1-830 MGCAQSIHAS ESR------- VAEDAPGPAA PPLQPGGPRL PPGQTTT--A 51 100 ENSP00000311453/1-829 LPRTRGAGLL ESELRDG--S GKKVAVADVQ FGPMRFHQDQ LQVLLVFTKE ENSBTAP00000021155/1-836 STRAPGSSLA ESEPRGG--N GSKVAIADVQ FGPMRFHPDQ LQVLLVFTKE bmy_18678T0/1-792 CASQCKISLS IRGKMGVDME GTNVAVADIQ FGPMRFHPDQ LQVLLVFPKE BACU016055/1-890 XXXXCGSSLV ESEPSGGSGN GNTVAVADIQ FGPMRFHPDQ LQVLLVFPKE ENSTTRP00000003792/1-830 SARSCGSSLV ESESSVGSSN GSTVAVADIQ FGPMRFHPDQ LQVLLVFPKE 101 150 ENSP00000311453/1-829 DNQCNGFCRA CEKAGFKCTV TKEAQAVLAC FLDKHHDIII IDHRNPRQLD ENSBTAP00000021155/1-836 DNQCNGFCRA CEKAGFMCTV TKEAQTALAC FLDKHHDIII IDHRNSRHLD bmy_18678T0/1-792 DKQCNGFCRA CEKAGFKCTV IKEAQTALAC FLDKHHDIII IDHRNPQQLD BACU016055/1-890 DKQCNGFCRA CEKAGFKCTV IKEAQTALAC FLDKHHDVII IDHRNPQQLD ENSTTRP00000003792/1-830 DKQCNGFCRA CEKAGFKCTV IKEAQTALAC FLDKHHDIII IDHRNPQQLD 151 200 ENSP00000311453/1-829 AEALCR---- ---------- ---------- ---SIRSSKL SENTVIVGVV ENSBTAP00000021155/1-836 AEALCR---- ---------- ---------- ---SIRSSKL SENTVIIGVV bmy_18678T0/1-792 GEVLCR---- ---------- ---------- ---SIRSSEL SENTVIVGVV BACU016055/1-890 GEVLCRFPTF EDKSGLFWLE HILTAVSGSS QSVVSYSSPI KEASSEYLLP ENSTTRP00000003792/1-830 GEVLCR---- ---------- ---------- ---SIRSSEL SENTVIVGVV 201 250 ENSP00000311453/1-829 RRVDREELSV MPFISAG--- ------FTRR YVENPNIMAC YNELLQLEFG ENSBTAP00000021155/1-836 RRVEREESCV MSLIAAG--- ------FTRR YIENPSPMAC YNELLQLEFG bmy_18678T0/1-792 RRAVREESSV MSLIEAG--- ------FTRR YVENPSAMAC YNEVLQMEFG BACU016055/1-890 IKISRQGPSS SLFLWPGSSS PDRPAFFPRR YVENPSTMAC YNELLQMEFG ENSTTRP00000003792/1-830 RXXXXXXXXX XXXXXXX--- ------XXXR YVENPSAMAC YNELLQMEFG 251 300 ENSP00000311453/1-829 EVRSQLKLRA CNSVFTALEN SEDAIEITSE DRFIQYANPA FETTMGYQSG ENSBTAP00000021155/1-836 EVRSQLKLRA CNSMFAALEK SQEAIEITSE DHIIQYANPA FETTMGYQSG bmy_18678T0/1-792 LVRPQLKLRA CNSMFTALEK SQEAIEITSE DHIVQYANPA FETTMGYESG BACU016055/1-890 LVRPQLKLRA CNSMFTALEK SQEAIEITSE DHIVQYANPA FETTMGYKSG ENSTTRP00000003792/1-830 LVRPQLKLRA CNSMFTALEK SQEAIEITSE DHIVQYANPA FETTMGYESG 301 350 ENSP00000311453/1-829 ELIGKELGEV PINEKKADLL DTINSCIRIG KEWQGIYYAK KKNGDNIQQN ENSBTAP00000021155/1-836 ELIGKEIAEV PINEKKADLL DTINSCKVSK REWQGIYSVR KKNGDNVQQN bmy_18678T0/1-792 ELIGKDLAEV PVNEKKADLL DTINSCIRIG KEWQGICSAK EKNGDNVQQN BACU016055/1-890 ELIGKDLAEV PVNEKKADLL DTINSCIRIG KEWQGICSAK EKNGDNVQQN ENSTTRP00000003792/1-830 ELIGKDLAEV PVNEKKADLL DTINSCIRIG KEWQGICSAK EKNGDNVQQN 351 400 ENSP00000311453/1-829 VKIIPVIGQG GKIRHYVSII RVCNGNNKAE KISECVQSDT HT-------- ENSBTAP00000021155/1-836 VKIIPVIGQG GKIRHYVSII RVCNGNNKAE TIAECVQTDS YA-------- bmy_18678T0/1-792 VKILPVIGQG GKIRHYVSIV RACNGNNKAT KIAECVQSDT HTGGAVGRGE BACU016055/1-890 VKILPVIGQG GKIRHYVSIV RACNGNNKVG LYFPSTMAAF LS-------- ENSTTRP00000003792/1-830 VKILPVIGQG GKIRHYVSIV RACNGNNKAT KIAECVQSDT HT-------- 401 450 ENSP00000311453/1-829 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021155/1-836 ---------- ---------- ---------- ---------- ---------- bmy_18678T0/1-792 HLERALGHRL EAEGADVKAV PQTGKQLCRH RPRVVGTARG ERQAVAGRLF BACU016055/1-890 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003792/1-830 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000311453/1-829 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021155/1-836 ---------- ---------- ---------- ---------- ---------- bmy_18678T0/1-792 LSLTASRFLF ISEVLKGFEQ GNPGLRVVAY ADGWRSRRVS VEHPLRAGSA BACU016055/1-890 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003792/1-830 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000311453/1-829 ---------- ---------- ---------- ---------- -------DNQ ENSBTAP00000021155/1-836 ---------- ---------- ---------- ---------- -------DNQ bmy_18678T0/1-792 GHLGKGEEGY FCPRVIHSWN PDEEAGRRQR RQKKLQFPNM LLKSLCRDNQ BACU016055/1-890 ---------- LTPRLVYESK DPST------ ---------- -------DNQ ENSTTRP00000003792/1-830 ---------- ---------- ---------- ---------- -------DHQ 551 600 ENSP00000311453/1-829 TGKHKDRRKG SLDVKAVASR ATEVSSQRRH SSMARIHSMT IEAPITKVIN ENSBTAP00000021155/1-836 SGKHKDRRKS SLDVKTVASR TNEVSSQRRH SSMARIHSMT IEAPITKVIN bmy_18678T0/1-792 SGKHNDRRKS SLDVRTAASR TSKVSSQRRR SSMARIHSMK IEAPITKAIN BACU016055/1-890 SGKHNDRRKS SLDVRTAASR TSKVSSQRRR SSMARIHSMK IEAPITKAIN ENSTTRP00000003792/1-830 SGKHNDRRKS SLDVRTAASR TSKVSSQRRR SSTARIHSMK IEAPITKAIN 601 650 ENSP00000311453/1-829 IINAAQESSP MPVTEALDRV LEILRTTELY SPQFGAKDDD PHANDLVGGL ENSBTAP00000021155/1-836 IINAAQESSP MPVTEALDRV LEILRTTELY SPQFGAKDDD PHANDLVGGL bmy_18678T0/1-792 IISAAQESSP MPVTEALDRV LEILRTTELY SPQFDAKDDD PHAIDLVGGL BACU016055/1-890 IISAAQESSP MPVTEALDRV LEILRTTELY SPQFDAKDDD PHAIDLVGGL ENSTTRP00000003792/1-830 IISAAQESSP MPVTEALDRV LEILRTTELY SPQFDAKDDD PHAIDLVGGL 651 700 ENSP00000311453/1-829 MSDGLRRLSG NEYVLSTKNT QMVSSNIITP ISLDDVPPRI ARAMENEEYW ENSBTAP00000021155/1-836 VSDGLRRLSG NEYVLSTKNL QQAPSSSIVP ISLHDVPSQI TRAMEKEEYW bmy_18678T0/1-792 MSDVFRRPSR NEYVLSTKNL QQVSSSVITP TSLHDIPSQI TQAMENEESW BACU016055/1-890 MSDVFRRPAR NEYVLSTKNL QQVSSSVITP TSLHDIPSQI TQAMENEESW ENSTTRP00000003792/1-830 MSDVFRRPSR NEYVLSTKNL QQASSSVITP TSLHDIPSQI TQAMENEESW 701 750 ENSP00000311453/1-829 DFDIFELEAA THNRPLIYLG LKMFARFGIC EFLHCSESTL RSWLQIIEAN ENSBTAP00000021155/1-836 DFSIFELEAA THKRPLIYLG LKVFARFGVC EFLKCPEATL RSWLQVIEAN bmy_18678T0/1-792 DFDIFELEAA THKRPLIYLG LKIFARFGVC EVLKCSETTL RSWXQIIEAN BACU016055/1-890 DFDIFELEAA THKRPLIYLG LKIFARFGVC EVLKCSETTL RSWMQIIEAN ENSTTRP00000003792/1-830 DFDIFELEAA THKRPLIYLG LKIFARFGVC EVLKCSETTL RSWLQIIEAN 751 800 ENSP00000311453/1-829 YHSSNPYHNS THSADVLHAT AYFLSKERIK ETLDPIDEVA ALIAATIHDV ENSBTAP00000021155/1-836 YHASNPYHNS THSADVLHAT AYFLCKERIK QTLDPLDEVA ALIAATIHDV bmy_18678T0/1-792 YHASNPYHNS THSADVLHAT AYFLCKERIK QTLDPLDEVT TLIAATVHDL BACU016055/1-890 YHASNPYHNS THSADVLHAT AYFLCKERIK QTLDPLDEVT TLIAATVHDL ENSTTRP00000003792/1-830 YHASNPYHNS THSADVLHAT AYFLCKERIK QTLDPLDEVT ALIAATVHDL 801 850 ENSP00000311453/1-829 DHPGRTNSFL CNAGSELAIL YNDTAVLESH HAALAFQLTT GDDKCNIFKN ENSBTAP00000021155/1-836 DHPGRTNSFL CNAGSELAIL YNDMAVLEHH HAALAFQLTT GDDKCNIFKN bmy_18678T0/1-792 DHPGRTNSFL CNAGSELAIL YNDTAVLERH HAALAFQLTT G--------- BACU016055/1-890 DHPGRTNSFL CNAGSELAIL YNDTAVLERH HAALAFQLTT GDDKCNIFKN ENSTTRP00000003792/1-830 DHPGRTNSFL CNAGSELAIL YNDTAVLERH HAALAFQLTT GDDKCNIFKN 851 900 ENSP00000311453/1-829 MERNDYRTLR QGIIDMVLAT EMTKHFEHVN KFVNSINKPL ATLEENGETD ENSBTAP00000021155/1-836 MERNDYQTLR QGIIDMVLAT EMTKHFEHVN KFVNIINKPL VALEEEEETD bmy_18678T0/1-792 ---------- -------MTT G--------- ---------- ---------- BACU016055/1-890 MERNDYRTLR QSIIDMVLAT EMTKHFEHVN KFVNSINKPL AALEEDGETD ENSTTRP00000003792/1-830 MERNDYRMLR QSIIDMVLAT EMQKHFEHVN KFVNSINKPL AALEEDGE-D 901 950 ENSP00000311453/1-829 KNQEVINTML RTPENRTLIK RMLIKCADVS NPCRPLQYCI EWAARISEEY ENSBTAP00000021155/1-836 KDQEAINTML RAPENRTLIK RMLIKCADVS NPCRPLEQCI EWAARISEEY bmy_18678T0/1-792 ---------- ---------- ----RCARVL ST-------- ---------- BACU016055/1-890 KNQEAIVTMP RTPDNRCLIK RMLIKCADVS NPCRPLEQCI EWAARISEEY ENSTTRP00000003792/1-830 KNQEAIITML RTPDNRSLIK RMLIKCADVS NPCRPLQQCI EWAARISXXX 951 1000 ENSP00000311453/1-829 FSQTDEEKQQ GLPVVMPVFD RNTCSIPKSQ ISFIDYFITD MFDAWDAFVD ENSBTAP00000021155/1-836 FSQTDEEKQR DLPVVMPVFD RNTCSIPKSQ ISFIDYFITD MFDAWDAFVD bmy_18678T0/1-792 ---------- ---------- ---------- ---------- ----WS---- BACU016055/1-890 FSQTDEEKRQ DLPVVMAVFD RNTCSIPKSQ ISFIDYFITD MFAAWDAFVD ENSTTRP00000003792/1-830 XXXTDEEKRQ DLPVVMPVFD RNTCSIPKSQ ISFIDYFITD MFAAWDAFVD 1001 1050 ENSP00000311453/1-829 LPDLMQHLDN NFKYWKGLDE MKLRNLRPPP E ENSBTAP00000021155/1-836 LPELMQHLDN NFKYWKGLDD MKLRSLRPPP E bmy_18678T0/1-792 ---------- ---------- ---------- - BACU016055/1-890 LPELMQHLDN NFKYWKGLDE MKLRSLRPPP E ENSTTRP00000003792/1-830 LPELMQHLDN NFKYWKGLDE MKLRSLRPPP E