KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:32 2014 Check: 00 .. Name: ENSP00000360329/1-387 Len: 417 Check: 8285 Weight: 1.00 Name: ENSTTRP00000016555/1-393 Len: 417 Check: 8495 Weight: 1.00 Name: ENSBTAP00000021186/1-343 Len: 417 Check: 44 Weight: 1.00 Name: bmy_14869T0/1-198 Len: 417 Check: 439 Weight: 1.00 Name: BACU000236/1-409 Len: 417 Check: 9588 Weight: 1.00 // 1 50 ENSP00000360329/1-387 --MEQPGQDP TSDDVMDSFL EKFQSQPYRG GFH------E DQWEKEFEKV ENSTTRP00000016555/1-393 TRTSGRRAGP GSPHVRARVI RTPGASGRRG AFLLRALPLP AERFLEFEKI ENSBTAP00000021186/1-343 ---------- ---------- ---------- ---------- ---------- bmy_14869T0/1-198 --MERPEPDA ASDDAMDSFL EKFQTQPYRG GFQ------E DQWEEEFEKI BACU000236/1-409 --MERPESDA ASDDAMDLFL EKFQSQPYRG GFH------E DQWEEEFEKI 51 100 ENSP00000360329/1-387 PLFMSRAPSE IDPRENPDLA CLQSIIFDEE RSPEEQAKTY KDEGNDYFKE ENSTTRP00000016555/1-393 PLFMKKAPSE IDPQENPDLA CLQSIIFDEE RPPEEQARTF KDEGNDY-KE ENSBTAP00000021186/1-343 ---MKNSPSE IDPLENPDLA CLQSIIFDEE RSPEDQARTY KDEGNDYFKE bmy_14869T0/1-198 PLFMKKAPSE IDPQENPDLA CLQSIIFDEE RSPEEQARTF KDEGNDYFKE BACU000236/1-409 PLFMKKAPSE IDPQENPDLA CLQSIIFDEE RSPEEQARTF KDEGNDYFKE 101 150 ENSP00000360329/1-387 KDYKKAVISY TEGLKKKCAD PDLNAVLYTN RAAAQYYLGN FRSALNDVTA ENSTTRP00000016555/1-393 KDY-KAVISY TEGLKKKCA- PDLNAVLYSN RAAAQYYLGN FRSALNDVTA ENSBTAP00000021186/1-343 KDYKKAVISY TEGLKKKCAD PDLNAVLYTN RAAAQYYLGN FRSSLNDVTA bmy_14869T0/1-198 KDYKKAVISY TEGLKKKCAD PDLNAILYSN RAAAQYYLGN FRSALNDVTA BACU000236/1-409 KEYKKAVISY TEGLKKKCAD PDLNAILYSN RAAAQYYLGN FRSALNDVTA 151 200 ENSP00000360329/1-387 ARKLKPCHLK AIIRGALCHL ELKHFAEAVN WCDEGLQIDA KEKKLLEMRA ENSTTRP00000016555/1-393 ARKLKPCHLK AIVRGALCHL ELKNYVEAVN WCDEGLQIDA TEKKLLEMRA ENSBTAP00000021186/1-343 ARKLKPCHLK AIIRGASCHL ELKNYVEAVN WCDEGLQIDA TEKKLLDLRA bmy_14869T0/1-198 ARKLKPCHLK AIVRGALCHL ELKNYVEAVN WCDEGLQIDA TEKKLLEMRA BACU000236/1-409 ARKLKPCHLK AIVRGALCHL ELKNYVEAVN WCDEGLQIDA TEKKLLEMRA 201 250 ENSP00000360329/1-387 KADKLKRIEQ RDVRKANLKE KKERNQNEAL LQAIKARNIR L-SEAACEDE ENSTTRP00000016555/1-393 KADKLKRTEQ RDIRKAKLKE KKEQNQNEAL LQAIMARNIR LVSEAAGEDE ENSBTAP00000021186/1-343 KADKLKRTEQ RDVRKAKLKE KKQQDQNEAL LQAIKARNIR LVAEAAGEDE bmy_14869T0/1-198 KADKLK---- ---------- ---------- ---------- ---------- BACU000236/1-409 KADKLKRTEQ RDIRKAKLKE KKEQNQNEAL LQAIVARNIR LVSEAAGEDE 251 300 ENSP00000360329/1-387 DSASEGLGEL FLDGLSTENP HGARLSLDGQ GRLSWPVLFL YPEYAQSDFI ENSTTRP00000016555/1-393 DSASEGLGEL ILNGLTSENL YGARLSVDDG GRLSWPVLFL YPEYAQSDFI ENSBTAP00000021186/1-343 DSASEGLSEL VLHGLGSENP CGARLGVDDQ GRLSWPVLFL YPEHAQSDLV bmy_14869T0/1-198 ---------- ---------- ---------- ---------- ---------- BACU000236/1-409 DSASEGLGEL ILSGLTSENL YGARLSVDDG GRLSWPVLFL YPEYAQSDFI 301 350 ENSP00000360329/1-387 SAFHEDSRFI DHLMVMFGET PSWDLEQKYC PDNLEVYFED EDRAELYRVP ENSTTRP00000016555/1-393 SAFHEDSRFI DHLMVMFGET PSWDLEQKYC PDNLEVYFED DDRSELYRVP ENSBTAP00000021186/1-343 SAFHEDSRFI DHLMVMFGET PSWDLDQKYC PDNLEVYFED EDRAELYCVP bmy_14869T0/1-198 ---------- ---------- ---------- ---------- ---------- BACU000236/1-409 SAFHEDSRFI DHLMVMFGET PSWDLEQKYC PDNLEVYFED DDRSELYRVP 351 400 ENSP00000360329/1-387 AKSTLLQVLQ HQRYFVKALT PAFLVCVGSS PFCKNFLRGR KVYQIR---- ENSTTRP00000016555/1-393 PKSTLLQVLQ HPRYFVKALT PAFLVCVGSS AFCRNYLRGR KVRQVK---- ENSBTAP00000021186/1-343 PSSTLLQVLQ HPRYFVKALT PTFLVCVGSS GFCRNYLRGK KVHQVK---- bmy_14869T0/1-198 ---------- ---------- ---------- ---------- ---------- BACU000236/1-409 PKSTLLEVLQ HPRYFVKALT PAFLVCVGSS AFCRNYLRGR KVRQAFPASW 401 450 ENSP00000360329/1-387 ---------- ------- ENSTTRP00000016555/1-393 ---------- ------- ENSBTAP00000021186/1-343 ---------- ------- bmy_14869T0/1-198 ---------- ------- BACU000236/1-409 LGRSCRLPEL QPLWSEC