KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:13:33 2014 Check: 00 .. Name: bmy_11851T0/1-519 Len: 765 Check: 8710 Weight: 1.00 Name: ENSTTRP00000012454/1-761 Len: 765 Check: 5892 Weight: 1.00 Name: ENSP00000265922/1-761 Len: 765 Check: 3086 Weight: 1.00 Name: ENSBTAP00000021192/1-761 Len: 765 Check: 2067 Weight: 1.00 // 1 50 bmy_11851T0/1-519 ---------- ---------M EPRNQRRVAC PCGSQKY--- ---------- ENSTTRP00000012454/1-761 MNWRFVELLY FLFVWGRISV QPSHQE---- PAGTDQHVSK EFDWLISDRG ENSP00000265922/1-761 MNWRFVELLY FLFIWGRISV QPSHQE---- PAGTDQHVSK EFDWLISDRG ENSBTAP00000021192/1-761 MNWRFVELLY FLFVWGRISV QPSHQE---- PAATDQHVSK EFDWLISDRG 51 100 bmy_11851T0/1-519 PVTHSRYS-- ---------- ---------- ---------- ---------- ENSTTRP00000012454/1-761 PFHHSRSYLS FVERHRQGFT TRYKIYREFA RWKVRNTAIE RRDLVRHPVP ENSP00000265922/1-761 PFHHSRSYLS FVERHRQGFT TRYKIYREFA RWKVRNTAIE RRDLVRHPVP ENSBTAP00000021192/1-761 PFHHSRSYLS FVERHRQGFT TRYKIYREFA RWKVRNTAIE RRDLVHHPVP 101 150 bmy_11851T0/1-519 ---------- ---------- -VNVLAGEAG AAWLIIIPAS SPEGWARC-- ENSTTRP00000012454/1-761 LMPEFQRSIR LLGRRPTTQQ FIDTIIKKYG THLLISATLG GEEALTMYMD ENSP00000265922/1-761 LMPEFQRSIR LLGRRPTTQQ FIDTIIKKYG THLLISATLG GEEALTMYMD ENSBTAP00000021192/1-761 LMPEFQRSIR LLGRRPTTQQ FIDTVIKKYG THLLISATLG GEEALTMYMD 151 200 bmy_11851T0/1-519 ---------- ---------- ---------- ---------- CSPGCNRIGP ENSTTRP00000012454/1-761 KSRLDRKSGN ATQSVEALHQ LASSYFVDRD GTMRRLHEIQ ISTGAIKVTE ENSP00000265922/1-761 KSRLDRKSGN ATQSVEALHQ LASSYFVDRD GTMRRLHEIQ ISTGAIKVTE ENSBTAP00000021192/1-761 KSRLDRKSGN ATQSVEALHQ LASSYFVDRD GTMRRLHEIQ ISTGAIKVTE 201 250 bmy_11851T0/1-519 TKQRPGG--- ---------- --------LE LCGWKVL--- ---------- ENSTTRP00000012454/1-761 TRTGPLGCNS YDNLDSVSSV LLQSTESKLH LQGLQIIFPQ YLQEKFVQSA ENSP00000265922/1-761 TRTGPLGCNS YDNLDSVSSV LLQSTESKLH LQGLQIIFPQ YLQEKFVQSA ENSBTAP00000021192/1-761 TRTGPLGCNS YDNLDSVSSV LLQSTESKLH LQGLQIIFPQ YLQEKFVQSA 251 300 bmy_11851T0/1-519 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012454/1-761 LSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000265922/1-761 LSYIMCNGEG EYLCQNSQCR CQCAEEFPQC NCPITDIQIM EYTLANMAKS ENSBTAP00000021192/1-761 LSYIMCNGEG EYVCQNSQCR CQCAEEFPQC NCPITDIQIM EYTLASMAKS 301 350 bmy_11851T0/1-519 --KTNSAIRE REEF--FFRK ---------- -----WGSGT TATVVIIIIN ENSTTRP00000012454/1-761 XXXXXXXXXX XXEFKSFMKR LPSNHFLSIG SIHQHWGNDW DVQNRYKLLQ ENSP00000265922/1-761 WAEAYKDLEN SDEFKSFMKR LPSNHFLTIG SIHQHWGNDW DLQNRYKLLQ ENSBTAP00000021192/1-761 WAEAYKDLEN SDEFKSFMKR LPSNHFLTIG SIHQHWGNDW DLQNRYKLLQ 351 400 bmy_11851T0/1-519 ITTAHESLK- ----KGFLDS CLKS-YEPGD SSTHSLTIQQ WLARVQSLLY ENSTTRP00000012454/1-761 SATEAQRQKI QRTARKLFGL SVRCRHNPNH QLPRERTIQQ WLARVQSLLY ENSP00000265922/1-761 SATEAQRQKI QRTARKLFGL SVRCRHNPNH QLPRERTIQQ WLARVQSLLY ENSBTAP00000021192/1-761 SAMEAQRQKI QRTARKLFGL SVRCRHNPNH QLPRERTIQQ WLARVQSLLY 401 450 bmy_11851T0/1-519 CNENGFWGTF LESQRSCVCH GSTTLCQRPI PCIIGGNNSC AMCSLANISL ENSTTRP00000012454/1-761 CNENGFWGTF LESQRSCVCH GSTTLCQRPI PCIIGGNNSC AMCSLANISL ENSP00000265922/1-761 CNENGFWGTF LESQRSCVCH GSTTLCQRPI PCVIGGNNSC AMCSLANISL ENSBTAP00000021192/1-761 CNENGFWGTF LESQRSCVCH GSTTLCQRPI PCIIGGNNSC AMCSLANISL 451 500 bmy_11851T0/1-519 CGSCNKGYKL YRGRCEPQNV DSERSEQFIS FETDLDFQDL ELKYLLQKMD ENSTTRP00000012454/1-761 CGSCNKGYKL YRGRCEPQNV DSERSEQFIS FETDLDFQDL ELKYLLQKMD ENSP00000265922/1-761 CGSCNKGYKL YRGRCEPQNV DSERSEQFIS FETDLDFQDL ELKYLLQKMD ENSBTAP00000021192/1-761 CGSCNKGYKL YRGRCEPQNV DSERSEQFIS FETDLDFQDL ELKYLLQKMD 501 550 bmy_11851T0/1-519 SRLYVHTTFI SNEIRLDTFF DPRWRKRMSL TLKSNKNRMD FIHMVIGMSM ENSTTRP00000012454/1-761 SRLYVHTTFI SNEIRLDTFF DPRWRKRMSL TLKSNKNRMD FIHMVIGMSM ENSP00000265922/1-761 SRLYVHTTFI SNEIRLDTFF DPRWRKRMSL TLKSNKNRMD FIHMVIGMSM ENSBTAP00000021192/1-761 SRLYVHTTFI SNEIRLDTFF DPRWRKRLSL TLKSNKNRMD FIHMVIGMSM 551 600 bmy_11851T0/1-519 RICQMRNSSL DPMFFVYVNP FSGSHSEGWN MPFGEFGYPR WEKIRLQNSQ ENSTTRP00000012454/1-761 RICQMRNSSL DPMFFVYINP FSGSHSEGWN MPFGEFGYPR WEKIRLQNSQ ENSP00000265922/1-761 RICQMRNSSL DPMFFVYVNP FSGSHSEGWN MPFGEFGYPR WEKIRLQNSQ ENSBTAP00000021192/1-761 RICQMRNSSL DPMFFVYINP FSGSHSEGWN MPFGEFGYPR WEKIRLQNSQ 601 650 bmy_11851T0/1-519 CYNWTLLLGN RWKTFFETVH IYLRSRTRLP TLLRNETGQG PVDLSDPSKR ENSTTRP00000012454/1-761 CYNWTLLLGN RWKTFFETVH IYLRSRTRLP TLLRNETGQG PVDLSDPSKR ENSP00000265922/1-761 CYNWTLLLGN RWKTFFETVH IYLRSRTRLP TLLRNETGQG PVDLSDPSKR ENSBTAP00000021192/1-761 CYNWTLLLGN RWKTFFETVH IYLRSRTRLP TLLRNETGQG PVDLSDPSKR 651 700 bmy_11851T0/1-519 QFYIKISDVQ VFGYSLRFNA DLLRSAVQQV NQSYTQGGQF YSSSSVMLLL ENSTTRP00000012454/1-761 QFYIKISDVQ VFGYSLRFNA DLLRSAVQQV NQSYTQGGQF YSSSSVMLLL ENSP00000265922/1-761 QFYIKISDVQ VFGYSLRFNA DLLRSAVQQV NQSYTQGGQF YSSSSVMLLL ENSBTAP00000021192/1-761 QFYIKISDVQ VFGYSLRFNA DLLRSAVQQV NQSYTQGGQF YSSSSVMLLL 701 750 bmy_11851T0/1-519 LDIRDRINRL APPVAPGKPQ LDLFSCMLKH RLKLTNSEII RVNHALDLYN ENSTTRP00000012454/1-761 LDIRDRINRL APPVAPGKPQ LDLFSCMLKH RLKLTNSEII RVNHALDLYN ENSP00000265922/1-761 LDIRDRINRL APPVAPGKPQ LDLFSCMLKH RLKLTNSEII RVNHALDLYN ENSBTAP00000021192/1-761 LDIRDRINRL APPVAPGKPQ LDLFSCMLKH RLKLTNSEII RVNHALDLYN 751 800 bmy_11851T0/1-519 TEILKQSDQM TAKLC ENSTTRP00000012454/1-761 TEILKQSDQM TAKLC ENSP00000265922/1-761 TEILKQSDQM TAKLC ENSBTAP00000021192/1-761 TEILKQSDQM TAKLC