KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:35 2014 Check: 00 .. Name: bmy_13473T0/1-391 Len: 430 Check: 9243 Weight: 1.00 Name: ENSP00000378324/1-426 Len: 430 Check: 5801 Weight: 1.00 Name: ENSBTAP00000021199/1-397 Len: 430 Check: 9083 Weight: 1.00 Name: ENSTTRP00000015035/1-422 Len: 430 Check: 5786 Weight: 1.00 Name: BACU004847/1-312 Len: 430 Check: 7039 Weight: 1.00 // 1 50 bmy_13473T0/1-391 ---------- ---------- ---------- -------DIL GVKPSASPEE ENSP00000378324/1-426 MARGGSQSWS SGESDGQPKE QTPEKPRHKM VKETQYYDIL GVKPSASPEE ENSBTAP00000021199/1-397 ---------- ---------- ---------M FPRTEMSSLI SLAPTGSWAQ ENSTTRP00000015035/1-422 MARGGSQNWS SGYSDQPEEQ ATGE----KM VKETQYYDIL GVKPSASPEE BACU004847/1-312 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_13473T0/1-391 IKKAYRKLAL KYHPDKNPDE GEKFKLISQA YEVLSDPKKR DIYDQGGEQA ENSP00000378324/1-426 IKKAYRKLAL KYHPDKNPDE GEKFKLISQA YEVLSDPKKR DVYDQGGEQA ENSBTAP00000021199/1-397 RKEXYRKLAL KYHPDKNPDE GEKFKLISQA YEVLSDPKKR DIYDQGGEQA ENSTTRP00000015035/1-422 IKKAYRKLAL KYHPDKNPDE GEKFKLISQA YEVLSDPKKR DIYDQGGEQA BACU004847/1-312 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_13473T0/1-391 IKEGGTGSPS FSSPMDIFDM FFGGGGRMAR ERRVR--IQT PVSNFVAHYP ENSP00000378324/1-426 IKEGGSGSPS FSSPMDIFDM FFGGGGRMAR ERRGKNVVHQ LSVTLEDLYN ENSBTAP00000021199/1-397 IKEGGSGSPS FSSPMDIFDM FFGGGGRMAR ERRGKNVVHQ LSVTLEDLYN ENSTTRP00000015035/1-422 IKEGGSGSPS FSSPMDIFDM FFGGGGRMAR ERRGKNVVHQ LSVTLEDLYN BACU004847/1-312 ---------- ----MDIFDM FFGGGGRMAR ERRGKNVVHQ LSVTLEDLYN 151 200 bmy_13473T0/1-391 SVVAPSRDAS KGGAQPCSCL PTGVGGKKGS VEKCPVCKGR GMQIHIQQIG ENSP00000378324/1-426 GVTKKLALQK NVICEKCE-- --GVGGKKGS VEKCPLCKGR GMQIHIQQIG ENSBTAP00000021199/1-397 GVTKKLALQK NVICEKCE-- --GVGGKKGS VEKCPVCKGR GMQIHIQQIG ENSTTRP00000015035/1-422 GVTKKLALQK NVICEKCE-- --GVGGKKGS VEKCPVCKGR GMQIHIQQIG BACU004847/1-312 GVTKKLALEK NVICEKCE-- --GVGGKKGS VEKCPVCKGR GMQIHIQQIG 201 250 bmy_13473T0/1-391 PGMVQQIQTV CIECKGQGER INPKDRCESC SGAKVIREKK SIEVHVEKGM ENSP00000378324/1-426 PGMVQQIQTV CIECKGQGER INPKDRCESC SGAKVIREKK IIEVHVEKGM ENSBTAP00000021199/1-397 PGMVQQIQTV CIECKGQGER INPKDRCESC NGAKVIREKK IIEVHVEKGM ENSTTRP00000015035/1-422 PGMVQQIQTV CIECNGQGER INPKDRCESC SGAKVIREKK IIEVHVEKGM BACU004847/1-312 PGMVQQIQTV CIECKGQGER INPKDRCESC SGAKVIREKK SIEVHVEKGM 251 300 bmy_13473T0/1-391 KDGQKILFHG EGDQEPELEP GDVIIVLDQK DHSVFQRRGH DLIMKMKIQL ENSP00000378324/1-426 KDGQKILFHG EGDQEPELEP GDVIIVLDQK DHSVFQRRGH DLIMKMKIQL ENSBTAP00000021199/1-397 KDGQKILFHG EGDQEPELEP GDVIIVLDQK DHSVFQRRGH DLIMKMKIQL ENSTTRP00000015035/1-422 KDGQKILFHG EGDQEPELEP GDVIIVLDQK DHSVFQRRGH DLIMKMKIQL BACU004847/1-312 KDGQKILFHG EGDQEPELEP GDVIIVLDQK DHSVFQRRGH DLIMKMKIQL 301 350 bmy_13473T0/1-391 SEALCGFKKM IKTLDDRVLI ITSKSGEVVK HGDLKCVPNE GMPIYKAPLE ENSP00000378324/1-426 SEALCGFKKT IKTLDNRILV ITSKAGEVIK HGDLRCVRDE GMPIYKAPLE ENSBTAP00000021199/1-397 SEALCGFKKT IKTLDDRVLV ITSKSGEVIK HGDLKCVRNE GMPIYKSPLE ENSTTRP00000015035/1-422 SEALCGFKKM IETLDDRVLI ITSKSGEVVK HGDLKCVRNE GMPIYKAPLE BACU004847/1-312 SEALCGFKKM IKTLDDRVLI ITSKSGEVVK HGDLKCVPNE GMPIYKAPLE 351 400 bmy_13473T0/1-391 KGTLIIQFLV TFPEKHWLSQ DKLPQLEALL PPRQKVRITD DMDQVELKEF ENSP00000378324/1-426 KGILIIQFLV IFPEKHWLSL EKLPQLEALL PPRQKVRITD DMDQVELKEF ENSBTAP00000021199/1-397 KGILIIQFLV IFPEKHWLPQ DKLSQLEALL PPRQKVRITE DMDQVELKEF ENSTTRP00000015035/1-422 KGALIIQFLV IFPEKHWLSQ ENLLQLEALL PPRQEVRITD DMDQVELKEF BACU004847/1-312 KGTLIIQFLV TFPEKHWLSQ DKLPQLEALL PPRQKVRITD DMDQVELKEF 401 450 bmy_13473T0/1-391 NPNEQNWRQH REAYEEDDDG PRAGVQCQTA ENSP00000378324/1-426 CPNEQNWRQH REAYEEDEDG PQAGVQCQTA ENSBTAP00000021199/1-397 NPNEQNWRQH REAYEEDDDG PRAGVQCQTA ENSTTRP00000015035/1-422 NPNEQNWRQH REAYEEDDDG PRAGVQCQTA BACU004847/1-312 SPNEQNWRQH REAYEEDDDG PRAGVQCQTA