KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:37 2014 Check: 00 .. Name: ENSP00000253247/1-719 Len: 720 Check: 7138 Weight: 1.00 Name: ENSBTAP00000021210/1-718 Len: 720 Check: 1865 Weight: 1.00 Name: ENSTTRP00000013240/1-717 Len: 720 Check: 3074 Weight: 1.00 Name: BACU011664/1-570 Len: 720 Check: 4307 Weight: 1.00 Name: bmy_06559T0/1-458 Len: 720 Check: 9860 Weight: 1.00 // 1 50 ENSP00000253247/1-719 MAALEEEFTL SSVVLSAGPE GLLGVEQSDK TDQFLVTDSG RTVILYKVSD ENSBTAP00000021210/1-718 MADLEEGFAL TAVPLGSGPD GPLGVEQSGK TDQFLVTDSG RTVILYKVSD ENSTTRP00000013240/1-717 MAALEEGFTL TAVPLGSGPD GPLGVEQSDK TDQFLVTDSG RTVILYKVSD BACU011664/1-570 MAALEEGFTL TAVPLGSGPD GPLGVEQSDK TDQFLVTDSG RTVILYKVSD bmy_06559T0/1-458 MAALEXGFTL TAVPLGSGPD GPLGVEQSDK TDQFLVTDSG RTVILYKVSD 51 100 ENSP00000253247/1-719 QKPLGSWSVK QGQIITCPAV CNFQTGEYVV VHDNKVLRIW NNEDVNLDKV ENSBTAP00000021210/1-718 QKPLGSWSVK QGQIITCPAV CNFQTGEYIV VHDNKVLRIW NNEDVNLDKV ENSTTRP00000013240/1-717 QKPLGSWSVK QGQIITCPAV CNFQTGEYIV VHDNKVLRIW NNEDVNLDKV BACU011664/1-570 QKPLGSWSVK QGQIITCPAV CNFQTGEYIV VHDNKVLRIW NNEDVNLDKV bmy_06559T0/1-458 QKPLGSWSVK QGQIITCPAV CNFQTGEYIV VHDNKVLRIW NNEDVNLDKV 101 150 ENSP00000253247/1-719 FKATLSAEVY RILSVQGTEP LVLFKEGAVR GLEALLADPQ QKIETVISDE ENSBTAP00000021210/1-718 FKATLSAEVY RIHSIQGTEP LVLFKEGAVR GLEALLAEPQ QKIETVISDE ENSTTRP00000013240/1-717 FKATLSAEVY RIHSIQGTEP LVLFKEGAIR GLEALLAEPQ QKIETVISDE BACU011664/1-570 FKATLSAEVY RIHSIQGAEP LVLFKEGAIR GLEALLAEPQ QKIETVTSDE bmy_06559T0/1-458 FKATLSAEVY RIHSVQGTEP LVLFKEGAIR GLEALLAEPQ QKIETVISDE 151 200 ENSP00000253247/1-719 EVIKWTKFFV VFRHPVLIFI TEKHGNYFAY VQMFNSRILT KYTLLLGQDE ENSBTAP00000021210/1-718 EVIKWTKFFM VFRHPVLIFI TEKHGNYFVY VQKFNSRILS KYTLLLGQEE ENSTTRP00000013240/1-717 EVIKWTKFFM VFRHPVLIFI TEKHGNYFAY VQKFNSRILS KYTLLLGQEE BACU011664/1-570 EVIKWTKFFM VFRHPVLIFI TEKHGNYFAY VQKFNSRILS KYTLLLRQEE bmy_06559T0/1-458 EVIKWTKFFM VFRHPVLIFI TEK------- ---------- ---------- 201 250 ENSP00000253247/1-719 NSVIKSFTAS VDRKFISLMS LSSDGCIYET LIPIRPADPE KNQSLVKSLL ENSBTAP00000021210/1-718 KCVIQSFSTS VGRKFISLMS LSSDGCVYET LIPIHPSEPE KNQRLVQSQL ENSTTRP00000013240/1-717 KSVTQSFSTS VHRKFISLMS LSSDGCVYET LIPVHPSDPE KNQRVVPSLL BACU011664/1-570 KSAAQSFSAS VYRKFISLIS LSSDGCIYET LIPIHPSDPE KNQRVVRSLL bmy_06559T0/1-458 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000253247/1-719 LKAVVSGNAR NGVALTALDQ DHVAVLGSPL AASKECLSVW NIKFQTLQTS ENSBTAP00000021210/1-718 LKSVVSGSAR NGVALAILDQ DHIAVLGAPL PASKECLSVW NTKFQTLQTS ENSTTRP00000013240/1-717 LKSVVSGNAR SGVALTILDQ DHVAVLGPPL SASKECLSIW NTKFQTLQTS BACU011664/1-570 LKSVVSGSAR SGVALTILDQ DHVAVLGPPL SASKECLSIW NTKFQTLQAS bmy_06559T0/1-458 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000253247/1-719 KELPQGTSGQ LWYYGEHLFM LHGKSLTVIP YKCEVSSLAG ALGKLKHSQD ENSBTAP00000021210/1-718 KELPQGTSGQ LWYYGENLFM LHGKFLTVVP FKCEVSSLAG ALGKLKHSQD ENSTTRP00000013240/1-717 KELPQGTSGQ LWYHGENLFM LHGKFLTVIP YKCEVSSLAG ALGKLKHGQD BACU011664/1-570 KELPQGTSGQ LWYHGENLFM LHGKFLTVIP YKCEVSSLAG ALGKLKHSQD bmy_06559T0/1-458 ---------- LWYHGENLFM LHGKFLTVIP YKCEVSSLAG ALGKLKHSQD 351 400 ENSP00000253247/1-719 PGTHVVSHFV NWETPQGCGL GFQNSEQSRR ILRRRKIEVS LQPEVPPSKQ ENSBTAP00000021210/1-718 PGIHATPHFV NWETSQGCGL GSQNSEQSKR ILRRRKVEVS VQPEVPASTQ ENSTTRP00000013240/1-717 PDIHAMTHFV NWETSQGYGL GSQNSEQSKR IL-RRKIEVS VQPE-PPSTQ BACU011664/1-570 PDIHAMTHFV NWETSQGYGL GSQNSEQSKR I--------- ---------- bmy_06559T0/1-458 PDIHAMTHFV NWETSQGYGL GSQNSEQSKR ILRRRKIEAS VQPEVPPSTQ 401 450 ENSP00000253247/1-719 LLSTIMKDSE KHIEVEVRKF LALKQTPDFH TVIGDTVTGL LERCKAEPSF ENSBTAP00000021210/1-718 LLATIQKDSE KHIEVELRKF LATKRTPDFH TIIGDVIIGL LGRCKAEPSF ENSTTRP00000013240/1-717 LLAAVQKDSE KHIEVELRKF LAVKRTPDFH TIIGDVVIGI LGRYKAEPSF BACU011664/1-570 ------KDSE KHIEVELRKF LAVKRTPDFH TIIGDVVIGL LGRCKAEPSF bmy_06559T0/1-458 LLAAVQKDSE KHIEVELRKF LAVKRTPDFH TIIGDVVIGL LGRYKAEPSF 451 500 ENSP00000253247/1-719 YPRNCLMQLI QTHVLSYSLC PDLMEIALKK KDVQLLQLCL QQFPDIPESV ENSBTAP00000021210/1-718 YPCNCLMQLV QTHVLSYSLC PGLMEFALEK TDVQILQLCL QQFPDIPESV ENSTTRP00000013240/1-717 YPRNCLMQLI QTRVLSYSLC PGLMESALEK TDVQILQICL QQFPDIPESV BACU011664/1-570 YPRNCLMQLI QTRVLSYSLC PGLMEFALEK TDVQILQLCL QQFPDIPESV bmy_06559T0/1-458 YPRNCLMQLI QTRVLSYSLC PGLMEFALEK TDVQILQLCL QQFPDIPESV 501 550 ENSP00000253247/1-719 TCACLKIFLS IGDDSLQETD VNMESVFDYS INSVHDEKME EQTEILQNGF ENSBTAP00000021210/1-718 TCACLKVFLS IGDDTLQDTD INMESVSDYM -DPVQDGEME EQTAFLQNGF ENSTTRP00000013240/1-717 TCACLKIFLS IGDDSLQETD INMESVSDYT -ATIQDGEIE QQTEILQNGF BACU011664/1-570 TCACLKIFLS IGDDSLQETD INMESVSDYT -AIIQDGEIE EQTEILQNGF bmy_06559T0/1-458 TCACLKIFLS IGDDSLQETD INMESVSDYT -AIIQDGEIE EQTEILQNGF 551 600 ENSP00000253247/1-719 NPEEDKCNNC DQELNKKPQD ETKESTSCPV VQKRAALL-N AILHSAYSET ENSBTAP00000021210/1-718 SPEEDNCDSC AQKLKEKPQA AADESTSCPV TPKRAALL-N AVLHSAYSET ENSTTRP00000013240/1-717 NPEEDNCENC AQELIEKPQA ATEESTSCPV TGKRAALLRN AILHSAYSET BACU011664/1-570 NPEEDNCENC AQELTEKPQA AAEESTSCPV TGKRAALL-- ---------- bmy_06559T0/1-458 NPEEDNCENC AQELIEKPQA ATEESTSCPV TGKRAALL-- ---------- 601 650 ENSP00000253247/1-719 FLLPHLKDIP AQHITLFLKY LYFLYLKCSE NATMTLPGIH PPTLNQIMDW ENSBTAP00000021210/1-718 FLLPHLKDIP AQHSTLFLQY LYFLYLKCSE NATMTLPGTH PPTLSQIMDW ENSTTRP00000013240/1-717 FLLPHLKDIP AQHITLFLQY LYFLYLKCSE NATMTLPGIH PPTLNQIMDW BACU011664/1-570 ---------- -----LWIGY VYF------- ---------- ---------- bmy_06559T0/1-458 ---------- -----LWIGY VYF------- ---------- ---------- 651 700 ENSP00000253247/1-719 ICLLLDANFT VVVMMPEAKR LLINLYKLVK SQISVYSELN KIEVSFRELQ ENSBTAP00000021210/1-718 ICLLLDANFT VVVMIPEAKR LLLSLYKFVK SQISICSELN KIEVSFRELQ ENSTTRP00000013240/1-717 ICLLLDANFT VVVMIPEAKR LLLSLYKFVK SQISICSELN KIEVSFRELQ BACU011664/1-570 ---------- ---------- ---------- ---------- ---------- bmy_06559T0/1-458 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000253247/1-719 KLNQEKNNRG LYSIEVLELF ENSBTAP00000021210/1-718 KLNQEKNNRE LYSIEVLELF ENSTTRP00000013240/1-717 KLNQEKTNRE LYSIEVLELF BACU011664/1-570 ---------- ---------- bmy_06559T0/1-458 ---------- ----------