KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:38 2014 Check: 00 .. Name: ENSTTRP00000009213/1-219 Len: 243 Check: 1186 Weight: 1.00 Name: ENSP00000358529/1-221 Len: 243 Check: 9250 Weight: 1.00 Name: ENSBTAP00000021222/1-232 Len: 243 Check: 126 Weight: 1.00 Name: bmy_16689T0/1-227 Len: 243 Check: 5483 Weight: 1.00 Name: BACU002680/1-194 Len: 243 Check: 7670 Weight: 1.00 // 1 50 ENSTTRP00000009213/1-219 MGRFGGAL-- ---------R CIKYLLLGFN LLFWLAGSAV IAFGLWFRFG ENSP00000358529/1-221 MGRFRGGL-- ---------R CIKYLLLGFN LLFWLAGSAV IAFGLWFRFG ENSBTAP00000021222/1-232 MGRFRGGL-- ---------R CIKYLLLGFN LLFWLAGSAV IAFGLWFRFG bmy_16689T0/1-227 MGRSLLGAGK PHPTPSSPSS CLLRLFT--- --FQLAGSAV IAFGLWFRFG BACU002680/1-194 ---------- ---------- ---------- --FQLAGSAV IAFGLWFRFG 51 100 ENSTTRP00000009213/1-219 GTMKDFSSED SSPEYFYMGL YVLAGAGALM MAVGFLGCCG ATRESQCVLG ENSP00000358529/1-221 GAIKELSSED KSPEYFYVGL YVLVGAGALM MAVGFFGCCG AMRESQCVLG ENSBTAP00000021222/1-232 GSMKDFSSED KSPEYFYMGL YVLVGAGALM MAVGFFGCCG ATRESQCVLG bmy_16689T0/1-227 GTMKDFSSED SSPEYFYMGL YVLVGAGALM MAVGFFGCCG ATRESQCVLG BACU002680/1-194 GTMKDFSSED SSPEYFYMGL YVLVGAGALM MAVGFFGCCG ATRESQCVLG 101 150 ENSTTRP00000009213/1-219 SFFTCLLVIF AAEITTGVFA FIGKDVAIRH VQTMYEEAYN D-LRDREKGN ENSP00000358529/1-221 SFFTCLLVIF AAEVTTGVFA FIGKGVAIRH VQTMYEEAYN DYLKDRGKGN ENSBTAP00000021222/1-232 SFFTCLLVIF AAEITTGVFA FIGKDVAIRH VQTMYEEAYN DYLRDKEKGN bmy_16689T0/1-227 SFFTCLLVIF AAEITTGVFA FIGKDVAIRH VQTMYEEAYN DYLRDREKGN BACU002680/1-194 SFFTCLLVIF AAEITTGVFA FIGKDVAIRH VQTMYEEAYN YYLRDREKGN 151 200 ENSTTRP00000009213/1-219 GTLI-FHSTF QCCGKESSEQ VQPTCPKELL GHKNCIDEIE RIISVKLQLI ENSP00000358529/1-221 GTLITFHSTF QCCGKESSEQ VQPTCPKELL GHKNCIDEIE TIISVKLQLI ENSBTAP00000021222/1-232 GTLITFHSTF QCCGKESPEQ VQPTCPKELL GHKNCIDEIE SIISVKLQLI bmy_16689T0/1-227 GTLITFHSTF QCCGKESSEQ VQPTCPKELL GHKNCIDEIE SVISVKLQLI BACU002680/1-194 GTLITFHSTF QCCGKESSEQ VQPTCPKELL GHKNCIDEIE SIISVKLHLI 201 250 ENSTTRP00000009213/1-219 GIVGIGIAAL TIFGMIFS-M VLCCAI---- RNSRDVI--- --- ENSP00000358529/1-221 GIVGIGIAGL TIFGMIFS-M VLCCAI---- RNSRDVI--- --- ENSBTAP00000021222/1-232 GIVGIGIAGL TIQRECYNPA ALSVHVIKQY ENPKTQINIW SSS bmy_16689T0/1-227 GIVGIGIAGL TIFGMIFS-M VLCCAI---- RNSRDVI--- --- BACU002680/1-194 GIVGIGIAGL TVRK--FQ-N IPSLTP---- KKP------- ---