KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:39 2014 Check: 00 .. Name: BACU009674/1-495 Len: 501 Check: 3013 Weight: 1.00 Name: ENSP00000362221/1-435 Len: 501 Check: 3639 Weight: 1.00 Name: ENSBTAP00000021243/1-436 Len: 501 Check: 7830 Weight: 1.00 Name: bmy_10796T0/1-428 Len: 501 Check: 5648 Weight: 1.00 Name: ENSTTRP00000011336/1-440 Len: 501 Check: 7814 Weight: 1.00 // 1 50 BACU009674/1-495 MEGGGGSGGG GSGGCAGRRR HVNSEFFQKP QIVQYGGMKG SVVP-----G ENSP00000362221/1-435 MKRRASDRGA --GETSARAK ALGSGISGNN -----AKRAG PFIL-----G ENSBTAP00000021243/1-436 MKRRASDRGA --GETSARAK ALGSGISGNN -----AKRAG PFIL-----G bmy_10796T0/1-428 MKRRASDRGA --GETSARAK ALGSGISGNN -----AKRAG PFIL-----G ENSTTRP00000011336/1-440 MKRRASDRGA --GETSARAK ALGSGISGNN -----AKRAG PFILAVCAIG 51 100 BACU009674/1-495 PRLGNSPVPS IVQCLARKDG TDDFYQLKIL TLEERGDQGI ESQEERQGKM ENSP00000362221/1-435 PRLGNSPVPS IVQCLARKDG TDDFYQLKIL TLEERGDQGI ESQEERQGKM ENSBTAP00000021243/1-436 PRLGNSPVPS IVQCLARKDG TDDFYQLKIL TLEERGDQGI ESQEERQGKM bmy_10796T0/1-428 PRLGNSPVPS IVQCLARKDG TDDFYQLKIL TLEERGDQGI ESQEERQGKM ENSTTRP00000011336/1-440 PRLGNSPVPS IVQCLARKDG TDDFYQLKIL TLEERGDQGI ESQEERQGKM 101 150 BACU009674/1-495 LLHTEYSLLS LLHTQDGVVH HHGLFQDRTC EIVEDAESSR MVKKMKKRIC ENSP00000362221/1-435 LLHTEYSLLS LLHTQDGVVH HHGLFQDRTC EIVEDTESSR MVKKMKKRIC ENSBTAP00000021243/1-436 LLHTEYSLLS LLHTQDGVVH HHGLFQDRTC EVVEDAESNR MVKKMKKRIC bmy_10796T0/1-428 LLHTEYSLLS LLHTQDGVVH HHGLFQDRTC EIVEDAESSR MVKKMKKRIC ENSTTRP00000011336/1-440 LLHTEYSLLS LLHTQDGVVH HHGLFQDRTC EIVEDAESSR MVKKMKKRIC 151 200 BACU009674/1-495 LVLDCLCAHD FSDKTADLIN LQHYVIKEKR LSERETVVIF YDVVRVVEAL ENSP00000362221/1-435 LVLDCLCAHD FSDKTADLIN LQHYVIKEKR LSERETVVIF YDVVRVVEAL ENSBTAP00000021243/1-436 LVLDCLCAHD FSDKTADLIN LQHYVIKEKR LSERETVVIF YDVVRVVEAL bmy_10796T0/1-428 LVLDCLCAHD FSDKTADLIN LQHYVIKEKR LSERETVVIF YDVVRVVEAL ENSTTRP00000011336/1-440 LVLDCLCAHD FSDKTADLIN LQHYVIKEKR LSERETVVIF YDVVRVVEAL 201 250 BACU009674/1-495 HQVCFAAGNI QKESGRRTRT PEDTVLQASA HGPGEAGPDP GSHLHSADHV ENSP00000362221/1-435 H--------- ---------- ---------- ---------- ---------- ENSBTAP00000021243/1-436 H--------- ---------- ---------- ---------- ---------- bmy_10796T0/1-428 H--------- ---------- ---------- ---------- ---------- ENSTTRP00000011336/1-440 H--------- ---------- ---------- ---------- ---------- 251 300 BACU009674/1-495 PVVFQKNIVH RDLKLGNMVL NKRTHRITIT NFCLGKHLVS EGDLLKDQRG ENSP00000362221/1-435 ----QKNIVH RDLKLGNMVL NKRTHRITIT NFCLGKHLVS EGDLLKDQRG ENSBTAP00000021243/1-436 ----QKNVVH RDLKLGNMVL SKRTHRITIT NFCLGKHLVS EGDLLKDQRG bmy_10796T0/1-428 ----QKNIVH RDLKLGNMVL NKRTHRITVT NFCLGKHLVS EGDLLKDQRG ENSTTRP00000011336/1-440 ----QKNIVH RDLKLGNMVL NKRTHRITIT NFCLGKHLVS EGDLLKDQRG 301 350 BACU009674/1-495 SPAYISPDVL SGRPYRGKPS DMWALGVVLF TMLYGQFPFY DSIPQELFRK ENSP00000362221/1-435 SPAYISPDVL SGRPYRGKPS DMWALGVVLF TMLYGQFPFY DSIPQELFRK ENSBTAP00000021243/1-436 SPAYISPDVL SGRPYRGKPS DMWALGVVLF TMLYGQFPFY DSIPQELFRK bmy_10796T0/1-428 SPAYISPDVL SGRPYRGKPS DMWALGVVLF TMLYGQFPFY DSIPQELFRK ENSTTRP00000011336/1-440 SPAYISPDVL SGRPYRGKPS DMWALGVVLF TMLYGQFPFY DSIPQELFRK 351 400 BACU009674/1-495 IKAAEYTIPE DGRVSENTVC LIRKLLVLDP QQRLAAADVL EALSAIIASW ENSP00000362221/1-435 IKAAEYTIPE DGRVSENTVC LIRKLLVLDP QQRLAAADVL EALSAIIASW ENSBTAP00000021243/1-436 IKAAEYTIPE DGRVSENTVC LIRKLLVLDP QQRLAAADVL EALSSIIASW bmy_10796T0/1-428 IKAAEYTIPE DGRVSENTVC LIRKLLVLDP QQRLAAADVL EALSAIIAS- ENSTTRP00000011336/1-440 IKAAEYTIPE DGRVSENTVC LIRKLLVLDP QQRLAAADVL EALSAIIASW 401 450 BACU009674/1-495 QSLSSLSGPL QVVPDIDDQM SNADSSQEAK VTEECSQYEF ENYMRQQLLL ENSP00000362221/1-435 QSLSSLSGPL QVVPDIDDQM SNADSSQEAK VTEECSQYEF ENYMRQQLLL ENSBTAP00000021243/1-436 QSLSSLSGPL QVVPDIDDQM SNADSSQEAK VTEECSQYEF ENYMRQQLLL bmy_10796T0/1-428 ------CGPL QVVPDIDDQM SNADSSQEAK VTEECSQYEF ENYMRQQLLL ENSTTRP00000011336/1-440 QSLSSLSGPL QVVPDIDDQM SNADSSQEAK VTEECSQYEF ENYMRQQLLL 451 500 BACU009674/1-495 AEEKSSVHEA RSWGPRRQLG S-VPPVRRLG RDAQPVNPLD AAILAQRYLR ENSP00000362221/1-435 AEEKSSIHDA RSWVPKRQFG S-APPVRRLG HDAQPMTSLD TAILAQRYLR ENSBTAP00000021243/1-436 AEEKSSVHEA RSWVPKRQSG AGVPPVRRLG HDAQPVNPLD AAILAQRYLR bmy_10796T0/1-428 AEEKSSVHEA RSWGPRRQLG S-VPPVRRLG HDAQPVNPLD AAILAQRYLR ENSTTRP00000011336/1-440 AEEKSSVHEA RSWGPRRQLG S-VPPVRRLG HDAQPVNPLD AAILAQRYLR 501 550 BACU009674/1-495 K ENSP00000362221/1-435 K ENSBTAP00000021243/1-436 K bmy_10796T0/1-428 K ENSTTRP00000011336/1-440 K