KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:39 2014 Check: 00 .. Name: ENSP00000355938/1-555 Len: 556 Check: 691 Weight: 1.00 Name: ENSBTAP00000021251/1-556 Len: 556 Check: 6736 Weight: 1.00 Name: ENSTTRP00000013156/1-470 Len: 556 Check: 3308 Weight: 1.00 Name: bmy_17651T0/1-341 Len: 556 Check: 9243 Weight: 1.00 Name: BACU006060/1-555 Len: 556 Check: 1923 Weight: 1.00 // 1 50 ENSP00000355938/1-555 MARPDDEEGA AVAPGHPLAK GYLPLPRGAP VGKESVELQN GPKAGTFPVN ENSBTAP00000021251/1-556 MARPDDEEGT AMASGHPPAN GYLPVPGDAP AGKVSAETQN GPTAGCLALN ENSTTRP00000013156/1-470 ---------- ---------- ---------- ---------- ---------- bmy_17651T0/1-341 MALPDDEEGT TVANGHPPAN GYLPVPGDAP AGKVSAETQN GPKAGCLALN BACU006060/1-555 MPLPDDEEGT TVANGHPPAN GYLPVPGDAP AGKVSAETQN GPKAGCLALN 51 100 ENSP00000355938/1-555 GAPRDSLAA- ASGVLGGPQT PLAPEEETQA RLLPAGAGAE TPGAESSPLP ENSBTAP00000021251/1-556 GVSRDSTKAT ASGTPDGPKT PLAPEEETQA RLLPKDPGEE TPGGEGTLVP ENSTTRP00000013156/1-470 ---------- ---------- ---------- ---PKDPGEQ TPA-EG-LVP bmy_17651T0/1-341 GVSRDSPKA- ASGALDGPKT PLAPEEETQA RLLPKDPGEE TPAVEGTLVP BACU006060/1-555 GVSRDSPKA- ASGALDGPKT PLAPEEETQA RLLPKDPGEE TPAVEGTLVP 101 150 ENSP00000355938/1-555 LTALSPRRFV VLLIFSLYSL VNAFQWIQYS IISNVFEGFY GVTLLHIDWL ENSBTAP00000021251/1-556 RIALSPRRFV VLLIFSAYSL VNAFQWIQYS IISNVFEGFY NVSSLHIDWL ENSTTRP00000013156/1-470 RTALS-RRFL VLLIFSLYSM VNAFQWIQYS IISNVFEGFY NVSSLHIDWL bmy_17651T0/1-341 RTALSARRFL VLLIFSLYSL VNAFQWIQYS IISNVFEGFY NVSSLHIDWL BACU006060/1-555 RTALSARRFL VLLIFSLYSL VNAFQWIQYS IISNVFESFY NVSSLHIDWL 151 200 ENSP00000355938/1-555 SMVYMLAYVP LIFPATWLLD TRGLRLTALL GSGLNCLGAW IKCGSVQQHL ENSBTAP00000021251/1-556 SMVYMLAYVP LIFPATWLLD TRGLRLTALL GSGLNCLGAW IKCGSVKQHL ENSTTRP00000013156/1-470 SMVYMLAYVP LIFPATWLLD TRGLRLTALL GSGLNCLGAW IKCGSVQQHL bmy_17651T0/1-341 SMVYMLAYVP LIFPATWLLD TRGLRLTALL GSGLNCLGAW IKCGSVQQHL BACU006060/1-555 SMVYMLAYVP LIFPATWLLD TRGLRLTALL GSGLNCLGAW IKCGSVQQHL 201 250 ENSP00000355938/1-555 FWVTMLGQCL CSVAQVFILG LPSRIASVWF GPKEVSTACA TAVLGNQLGT ENSBTAP00000021251/1-556 FWVTMLGQCL CSVAQVFILG LPSHIASVWF GPKEVSTACA TAVLGNQLGT ENSTTRP00000013156/1-470 FWVTMLGQCL CSVAQVFILG LPSHIASVWF GPKEVSTACA TAVLGNQLGT bmy_17651T0/1-341 FWVTMLGQCL CSVAQVFILG LPSHIASVWF GPKEVSTACA TAVLGNQLGT BACU006060/1-555 FWVTMLGQCL CSVAQVFILG LPSHIASVWF GPKEVSTACA TAVLGNQLGT 251 300 ENSP00000355938/1-555 AVGFLLPPVL VPNTQNDTNL LACNISTMFY GTSAVATLLF ILTAIAFKEK ENSBTAP00000021251/1-556 AVGFLLPPVL VPNTQNNTQL LARNISTMFY GTSAVATLLF ILTVIAFKEK ENSTTRP00000013156/1-470 AVGFLLPPVL VPNTQNNTQL LACNISTMFY GTSAVSTLLF ILTVIAFKEK bmy_17651T0/1-341 AVGFMLPPVL VPNTQNNTQL LACNISTMFY GTSAVATLLF ILTVIAFKEK BACU006060/1-555 AVGFLLPPVL VPNTQNNTQL LACNISTMFY GTSAVATLLF ILTVIAFKEK 301 350 ENSP00000355938/1-555 PRYPPSQAQA ALQDSPPEEY SYKKSIRNLF KNIPFVLLLI TYGIMTGAFY ENSBTAP00000021251/1-556 PQYPPSQAQA VLQDSPPGEY SYVKSIRNLF KNIPFVLLLI SYGIMTGAFY ENSTTRP00000013156/1-470 PQYPPSQAQA VLQDSPPGEY SYGKSIRNLF KNIPFVLLLI TYGIMTGAFY bmy_17651T0/1-341 PQYPPSQAQA VLQDSPPGDY SYVKSIRNLF KNIPFVLLLI TY-------- BACU006060/1-555 PQYPPSQAQA VLQDSPPGEY SYVKSIRNLF KNIPFVLLLI TYGIMTGAFY 351 400 ENSP00000355938/1-555 SVSTLLNQMI LTYYEGEEVN AGRIGLTLVV AGMVGSILCG LWLDYTKTYK ENSBTAP00000021251/1-556 SVSTLLNQMI LTHYEGEEVN AGRIGLTLVV AGMVGSILCG LWLDYTKTYK ENSTTRP00000013156/1-470 SVSTLLNQII LTYYKGEEVN AGRIGLTLVL AGMVGSILCG LWLDYTKTYK bmy_17651T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU006060/1-555 SVSTLLNQII LTYYEGEEVN AGRIGLTLVL AGMVGSILCG LWLDYTKTYK 401 450 ENSP00000355938/1-555 QTTLIVYILS FIGMVIFTFT LDLRYIIIVF VTGGVLGFFM TGYLPLGFEF ENSBTAP00000021251/1-556 HTTLTVYILS FVGMVIFTFT LNLGHIIIVF VTGGLLGFFM TGYLPLGFEF ENSTTRP00000013156/1-470 HTTLTVYILS FVGMVIFTFT LNLGHIIIVF VTGGLLGFFM TGYLPLGFEF bmy_17651T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU006060/1-555 HTTLTVYILS FVGMVIFTFT LNLGHIIIVF VTGGLLGFFM TGYLPLGFEF 451 500 ENSP00000355938/1-555 AVEITYPESE GTSSGLLNAS AQIFGILFTL AQGKLTSDYG PKAGNIFLCV ENSBTAP00000021251/1-556 AVEITYPESE GTSSGLLNAA AQIFGILFTL AQGKLTSAYG PRTGNVFLCV ENSTTRP00000013156/1-470 AVEITYPESE GTSSGLLNAA AQIFGILFTL AQGKLTSDYS PTGGNIFLCV bmy_17651T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU006060/1-555 AVEITYPESE GTSSGLLNAA AQIFGILFTL AQGKLTSDYG PRTGNVFLCV 501 550 ENSP00000355938/1-555 WMFIGIILTA LIKSDLRRHN INIGITNVDV KAIPADSPTD QEPKTVMLSK ENSBTAP00000021251/1-556 WIFGGIILTA LIKSDLKRHN INKGITNGDI KAVPVDSPTD QESKTVLMSK ENSTTRP00000013156/1-470 WMFVGIILTA LIKSDLKRHN INKGITNGDI KAVPVDSPTD EESKTILMSK bmy_17651T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU006060/1-555 WMFLGIILTA LIKSDLKRHN INKGITNGDI KAVPVDSPTD EESKTILMSK 551 600 ENSP00000355938/1-555 QSESAI ENSBTAP00000021251/1-556 QSESAI ENSTTRP00000013156/1-470 QSESAI bmy_17651T0/1-341 ------ BACU006060/1-555 QSESAI