KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:40 2014 Check: 00 .. Name: ENSTTRP00000009536/1-328 Len: 346 Check: 5629 Weight: 1.00 Name: bmy_09317T0/1-346 Len: 346 Check: 7569 Weight: 1.00 Name: BACU009501/1-346 Len: 346 Check: 6665 Weight: 1.00 Name: ENSP00000366109/1-346 Len: 346 Check: 9402 Weight: 1.00 Name: ENSBTAP00000021256/1-346 Len: 346 Check: 9396 Weight: 1.00 // 1 50 ENSTTRP00000009536/1-328 MAMVNEFLKQ AWFIDNDEQE YIKTVKGSKG GPGSSVSPYP SFNPSSDVEA bmy_09317T0/1-346 MAMVTEFLKQ AWFIDNEEQE YVKAVKGCKG GPGSSVSPCP SFDPCSDVEA BACU009501/1-346 MAMVTEFLKQ AWFIDNEEQE YIKAVKGSKG GPGSSVSPCP SFDPCSDVEA ENSP00000366109/1-346 MAMVSEFLKQ AWFIENEEQE YVQTVKSSKG GPGSAVSPYP TFNPSSDVAA ENSBTAP00000021256/1-346 MAMVSEFLKQ AWFIENEEQE YIKTVKGSKG GPGSAVSPYP TFNPSSDVEA 51 100 ENSTTRP00000009536/1-328 LHKAITAKGV DEATIIEILT KRNNAQRQQI KAAYLQEKGK PLDEALKKAL bmy_09317T0/1-346 LHKAITAKGV DEATIIEILT KRNNAQRQQI KAAYLQEKGK PLDEALKKAL BACU009501/1-346 LHKAITAKGV DEATIIEILT KRNNAQRQQI KAAYLQEKGK PLDEALKKAL ENSP00000366109/1-346 LHKAIMVKGV DEATIIDILT KRNNAQRQQI KAAYLQETGK PLDETLKKAL ENSBTAP00000021256/1-346 LHKAITVRGV DEATIIEILT KRNNAQRQQI KAAYLQEKGK PLDEVLKKAL 101 150 ENSTTRP00000009536/1-328 TGHLETVALA LLKTPAQFDA DELRAAMRXX XXXXXXXXXX XXXXXXXXXX bmy_09317T0/1-346 TGHLEEVALA LLKTPARFDA DELHAAMKHL GTDEDTLNEI LASRTNTEIR BACU009501/1-346 TGHLEEVALA LLKTPARFDA DELHAAMKCF GTDEDTLNEI LASRTNTEIR ENSP00000366109/1-346 TGHLEEVVLA LLKTPAQFDA DELRAAMKGL GTDEDTLIEI LASRTNKEIR ENSBTAP00000021256/1-346 LGHLEEVVLA LLKTPAQFDA EELRAAMKGL GTDEDTLNEI LASRTNREIR 151 200 ENSTTRP00000009536/1-328 XXXXXXXXXL KRDLAKDITS DTSGEYRKAL LSLAKGERCE DLAVDDDLAD bmy_09317T0/1-346 EINRVYREEL KRDLAKDIIS DTSGDYKTAL LSLAKGDRCE ELAINDDLVD BACU009501/1-346 EINRVYREEL KRDLAKDIIS DTSGDYKTAL LSLAKGDRCE ELAVKDDLVD ENSP00000366109/1-346 DINRVYREEL KRDLAKDITS DTSGDFRNAL LSLAKGDRSE DFGVNEDLAD ENSBTAP00000021256/1-346 EINRVYREEL KRDLAKDIAS DTSGDYEKAL LSLAKGDRSE ELAVNDDLAD 201 250 ENSTTRP00000009536/1-328 TDARALYEAG EKRKGTDVNV FTTILTTRSP CHLRRVFQKY SKFSKHDMNK bmy_09317T0/1-346 TDARDLYEAG ERRKGTDVNV FTTILTTRSY PHLRRVFQKY SKYSKHDMNK BACU009501/1-346 TDARALYEAG ERRKGTDVNV FITILTTRSY PHLCRVFQKY SKYSKHDMSK ENSP00000366109/1-346 SDARALYEAG ERRKGTDVNV FNTILTTRSY PQLRRVFQKY TKYSKHDMNK ENSBTAP00000021256/1-346 SDARALYEAG ERRKGTDVNV FITILTTRSY PHLRRVFQKY SKYSKHDMNK 251 300 ENSTTRP00000009536/1-328 VLDLELKGDI EKCLTVIVKC ATSKSMFFAE KLHQAMKGIG TRHKTLIRIM bmy_09317T0/1-346 VLDLELKGDI EKCLTVIVKC VTSKSMFFAE KLHQAMKGIG TRHKTLIRIM BACU009501/1-346 VLDLELKGDI EKCLTVIVKC VTSKSIFFAE KLHQAMKGIG ARHKTLIRIM ENSP00000366109/1-346 VLDLELKGDI EKCLTAIVKC ATSKPAFFAE KLHQAMKGVG TRHKALIRIM ENSBTAP00000021256/1-346 VLDLELKGDI EKCLTVIVKC ATSQPMFFAE KLHQAMKGIG TRHKTLIRIM 301 350 ENSTTRP00000009536/1-328 VSRSEIDMND IKACYQKLYG ISLCQAIL-- ---------- ------ bmy_09317T0/1-346 VSRSEIDMND IKACYQKLYG ISLCQAILDE TKGDYEKILV SLCAGD BACU009501/1-346 VSRSEIDMND IKACYQKLYG ISLCQAILDA TKGDYEKILV SLCGGD ENSP00000366109/1-346 VSRSEIDMND IKAFYQKMYG ISLCQAILDE TKGDYEKILV ALCGGN ENSBTAP00000021256/1-346 VSRSEIDMND IKACYQKLYG ISLCQAILDE TKGDYEKILV ALCGRD