KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:42 2014 Check: 00 .. Name: ENSTTRP00000006910/1-490 Len: 608 Check: 5046 Weight: 1.00 Name: ENSP00000405327/1-477 Len: 608 Check: 3582 Weight: 1.00 Name: bmy_05581T0/1-383 Len: 608 Check: 9342 Weight: 1.00 Name: BACU000477/1-424 Len: 608 Check: 1030 Weight: 1.00 Name: ENSBTAP00000021259/1-477 Len: 608 Check: 3317 Weight: 1.00 // 1 50 ENSTTRP00000006910/1-490 MSGRGDGGQQ QLLLSKFLAG FVCHIEKNEN QRGRNCNEKP TNVRKRKFIN ENSP00000405327/1-477 MDGFYDQQVP YMV------- -------TNS QRGRNCNEKP TNVRKRKFIN bmy_05581T0/1-383 ---------- ---------- ---------- ---------- ---------- BACU000477/1-424 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021259/1-477 MDGFYDQQVP YMV------- -------TNN QRGRNCNEKP TNVRKRKFIN 51 100 ENSTTRP00000006910/1-490 RDLAHDSEEL FQDLSQLQET WLAEGKVPDN DEQFVPDYQA ESLAFHGLPL ENSP00000405327/1-477 RDLAHDSEEL FQDLSQLQET WLAEAQVPDN DEQFVPDYQA ESLAFHGLPL bmy_05581T0/1-383 ---------- ---------- MFSE------ ---------- --MAFHGLPL BACU000477/1-424 ---------- ---------- ---------- ---------- --VAFHGLPL ENSBTAP00000021259/1-477 RDLAHDSEEL FQDLSQLQET WLAEAQVPDN DEQFVPDYQA ESLAFHGLPL 101 150 ENSTTRP00000006910/1-490 KIKKEPHSPC SELGSACSQE QPFKFSYGEK CLYNVXXXXX XXXXXXXXXX ENSP00000405327/1-477 KIKKEPHSPC SEISSACSQE QPFKFSYGEK CLYNVSAYDQ KPQVGMRPSN bmy_05581T0/1-383 KIKKEPHSPC SELGSACSQE QPFKFSYGEK CLYNV----- ---------- BACU000477/1-424 KIKKEPHSPC SELGSACSQE QPFKFSYGEK CLYNVSAYDQ KPQVGMRPSN ENSBTAP00000021259/1-477 KIKKEPHSPC SELGSACSQE QPFKFSYGEK CLYNVSAYDQ KPQVGMRPSN 151 200 ENSTTRP00000006910/1-490 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXF ENSP00000405327/1-477 PPTPSSTPVS PLHHASPNST HTPKPDRAFP AHLPPSQSIP DSSYPMDHRF bmy_05581T0/1-383 ---------- ---------- ---------- ---------- --------RF BACU000477/1-424 PPTPSSTPVS PLHHASPNSA HTSKPDRAFP AHLPPSQPIQ DSSYPMDHRF ENSBTAP00000021259/1-477 PPTPSSTPVS PLHHASPNSA HTSKPDRAFP AHLPPSQPIQ DSSYPMDHRF 201 250 ENSTTRP00000006910/1-490 RRQLSEPCNS FPPLP-MPRE GRPMYQRQMS EPNIPFPPQG FKQEYHDPVY ENSP00000405327/1-477 RRQLSEPCNS FPPLPTMPRE GRPMYQRQMS EPNIPFPPQG FKQEYHDPVY bmy_05581T0/1-383 RRQLSEPCNS FPPLPTMPRE GRPMYQRQMS EPNIPFPPQG FKQEYHDPVY BACU000477/1-424 RRQLSEPCNS FPPLPTMPRE GRPMYQRQMS EPNIPFPPQG FKQEYHDPVY ENSBTAP00000021259/1-477 RRQLSEPCNS FPPLPTMPRE GRPMYQRQMS EPNIPFPPQG FKQEYHDPVY 251 300 ENSTTRP00000006910/1-490 EHNTMVGGAA SQSFPPPLMI KQEPRDFAYD SE-------- VPSCHSIYMR ENSP00000405327/1-477 EHNTMVGSAA SQSFPPPLMI KQEPRDFAYD SE-------- VPSCHSIYMR bmy_05581T0/1-383 EHNTMVGGAA SQSFPPPLMI KQEPRDFAYD SDSKCPMRAM SPGTDEAFFQ BACU000477/1-424 EHNTMVGGAA SQSFPPPLMI KQEPRDFAYD S--------- ---------- ENSBTAP00000021259/1-477 EHNTMVGGAA SQSFPPPLMI KQEPRDFAYD SE-------- VPSCHSIYMR 301 350 ENSTTRP00000006910/1-490 ---------- ---------- ---------- QEGFLAHPSR TEG------- ENSP00000405327/1-477 ---------- ---------- ---------- QEGFLAHPSR TEG------- bmy_05581T0/1-383 HSKDLMRNQL EIYSGIVDCN HFPIWLQVTG REKFCKHYSR HTKTDIVLFL BACU000477/1-424 ---------- ---------- ---------- ---------- --G------- ENSBTAP00000021259/1-477 ---------- ---------- ---------- QEGFLTHPSR TEG------- 351 400 ENSTTRP00000006910/1-490 ---------- ---------- ----CMFEKG PRQFYDDTCV VPEKFDGDIK ENSP00000405327/1-477 ---------- ---------- ----CMFEKG PRQFYDDTCV VPEKFDGDIK bmy_05581T0/1-383 SSNYTKSLHV ASGNAEYKDA TLVCCMFEKG PRQFYDDTCV VPEKFDGDIK BACU000477/1-424 ---------- ---------- ----CMFEKG PRQFYDDTCV VPEKFDGDIK ENSBTAP00000021259/1-477 ---------- ---------- ----CMFEKG PRQFYDDTCV VPEKFDGDIK 401 450 ENSTTRP00000006910/1-490 QEPGMYREGP TYQRRGSLQL WQFLVALLDD PSNSHFIAWT GRGMEFKLIE ENSP00000405327/1-477 QEPGMYREGP TYQRRGSLQL WQFLVALLDD PSNSHFIAWT GRGMEFKLIE bmy_05581T0/1-383 QEPGMYREGP TYQRRGSLQL WQFLVALLDD PSNSHFIAWT GRGMEFKLIE BACU000477/1-424 QEPGMYREGP TYQRRGSLQL WQFLVALLDD PSNSHFIAWT GRGMEFKLIE ENSBTAP00000021259/1-477 QEPGMYREGP TYQRRGSLQL WQFLVALLDD PSNSHFIAWT GRGMEFKLIE 451 500 ENSTTRP00000006910/1-490 PE-------- ---------- ---------- ---------- ---------- ENSP00000405327/1-477 PE-------- ---------- ---------- ---------- ---------- bmy_05581T0/1-383 PE-------- ---------- ---------- ---------- ---------- BACU000477/1-424 PEEGYLGMHG SCNFCSDEAK VEINAKVTSA GVTEAGHPVL DNAAASQGSG ENSBTAP00000021259/1-477 PE-------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000006910/1-490 EVARRWGIQK NRPAMNYDKL SRSLRYYYEK GIMQKVAGER YVYKFVCDPE ENSP00000405327/1-477 EVARRWGIQK NRPAMNYDKL SRSLRYYYEK GIMQKVAGER YVYKFVCDPE bmy_05581T0/1-383 EVARRWGIQK NRPAMNYDKL SRSLRYYYEK GIMQK----- ---------- BACU000477/1-424 EVARRWGIQK NRPAMNYDKL SRSLRYYYEK GIMQKVAGER YVYKFVCDPE ENSBTAP00000021259/1-477 EVARRWGIQK NRPAMNYDKL SRSLRYYYEK GIMQKVAGER YVYKFVCDPE 551 600 ENSTTRP00000006910/1-490 ALFSMAFPDN QRPLLKTDME RHINEEDTVP LSHFDESMAY MPEGGCCNPH ENSP00000405327/1-477 ALFSMAFPDN QRPLLKTDME RHINEEDTVP LSHFDESMAY MPEGGCCNPH bmy_05581T0/1-383 ---------- -RPLLKTDME RHINEEDTVP LSHFDESMAY MPEGGCCNPH BACU000477/1-424 ALFSMAFPDN QRPLLKTDME RHINEEDTVP LSHFDESMAY MPEGGCCNPH ENSBTAP00000021259/1-477 ALFSMAFPDN QRPLLKTDME RHINEEDTVP LSHFDESMAY MPEGGCCNPH 601 650 ENSTTRP00000006910/1-490 PYNEGYVY ENSP00000405327/1-477 PYNEGYVY bmy_05581T0/1-383 PYNEGYVY BACU000477/1-424 PYNEGYVY ENSBTAP00000021259/1-477 PYNEGYVY