KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:13:47 2014 Check: 00 .. Name: ENSP00000366970/1-358 Len: 390 Check: 2260 Weight: 1.00 Name: ENSBTAP00000021264/1-361 Len: 390 Check: 2390 Weight: 1.00 Name: bmy_20446T0/1-360 Len: 390 Check: 9902 Weight: 1.00 Name: BACU001509/1-389 Len: 390 Check: 4571 Weight: 1.00 // 1 50 ENSP00000366970/1-358 MPSVSPAGPS AGAVPNAT-A VTTVRTNASG LEVPLFHLFA RLDEELHGTF ENSBTAP00000021264/1-361 MPSTSPAGPS AGAAPNATAA AAAAWTNVSL PEMPLFHRFA QLDEQLHASF bmy_20446T0/1-360 MPSASSAGPS AMAAPNAT-A AAAAWTNVSM PETPLFHLFA LLDEELHAAF BACU001509/1-389 MPSASSAGPS AMAAPNAT-A AAAAWTNVSM LETPLFHLFA LLDEELHAAF 51 100 ENSP00000366970/1-358 PGLWLALMAV HGAIFLAGLV LNGLALYVFC CRTRAKTPSV IYTINLVVTD ENSBTAP00000021264/1-361 PGLWLALMAA HGVIFLAGMV LNGLALYVFG CRTRAKTPSV VYTINLVVTD bmy_20446T0/1-360 PGLWLALMAV HGVIFLVGLV LNGLALYVFG CRTQAKTPSI IYTINLVVTD BACU001509/1-389 PGLWLALMAV HGVIFLVGLV LNGLALYVFG CRTQAKTPSI IYTINLVVTD 101 150 ENSP00000366970/1-358 LLVGLSLPTR FAVYYGARGC LRCAFPHVLG YFLNMHCSIL FLTCICVDRY ENSBTAP00000021264/1-361 LLVGLSLPTR FAVFYGARGC LRCALPHVFG YFLNMHCSIL FLSCICVDRY bmy_20446T0/1-360 LLVGLSLPAR FAVFYGTRGC LRCALPHVFG YFLNMHCSIL FLTCICVDRY BACU001509/1-389 LLVGLSLPAR FAVFYGTRGC LRCALPHVFG YFLNMHCSIL FLTCICVDRY 151 200 ENSP00000366970/1-358 LAIVRPEGSR RCRQPACARA VCAFVWLAAG AVTLSVLGVT GS-RPC---- ENSBTAP00000021264/1-361 LAIVRPGGSR RWRQPACARA VCAFVWLAAG AVTLSVLGVT TAGGPC---- bmy_20446T0/1-360 LAIVQPDGCR RWRQPACARA VCAFVWLAAG AVTLSVLGVT ATGGPC---- BACU001509/1-389 LAIVQPDGCR RWRQPACARA VCAFVWLAAG AVTLSVLGVT ATGXXXXXXX 201 250 ENSP00000366970/1-358 ---------- ---------- -----CRVFA LTVLEFLLPL LVISVFTGRI ENSBTAP00000021264/1-361 ---------- ---------- -----CRIFA LTVLEFLLPL LVISVFTGRI bmy_20446T0/1-360 ---------- ---------- -----CRVFA LTVLEFLLPL LVISVFTGRI BACU001509/1-389 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 251 300 ENSP00000366970/1-358 MCALSRPGLL HQGRQRRVRA MQLLLTVLII FLVCFTPFHA RQVAVALWPD ENSBTAP00000021264/1-361 VCALSRPGLL HQGRQRRVRA MQLLLTVLVI FLVCFTPFHA RQVAVALWPG bmy_20446T0/1-360 VCALSRPGLP RQGRQRRVRA VQLLLTVLVI FLVCFTPFHA RQVAVALWPD BACU001509/1-389 XXXLSRPGLP RPGRQRRVRA VQLLLTVLVI FLVCFTPFHA RQVAVALWPD 301 350 ENSP00000366970/1-358 MPHHTSLVVY HVAVTLSSLN SCMDPIVYCF VTSGFQATVR GLFGQHG-ER ENSBTAP00000021264/1-361 MPHHASLVAY HVAVTLSSLN SCMDPIVYCF VTSSFQATVR GLCGRRGAEC bmy_20446T0/1-360 VPRHTSLVVY HVAVTLSSLN SCMDPIVYCF VTSSFQTTVR GLFRRHGAER BACU001509/1-389 VPRHTSLVVY HVAVTLSSLN SCMDPIVYCF VTSSFQTTVR GLFRRHGAER 351 400 ENSP00000366970/1-358 EPSSGDVVSM HRSSKGSGRH HILSAGPHAL TQALANGPEA ENSBTAP00000021264/1-361 EPNSCDVVSV QKSSKGSAHH HILGARAQAV TQALPNGPDA bmy_20446T0/1-360 EPNSCDAVSM RKSSKDPAHH HILGARPRAL TQALANGPEA BACU001509/1-389 EPNSCDVVSM RKSSKDSAHH HILGARPRAL TQALANGPEA