KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:47 2014 Check: 00 .. Name: bmy_05432T0/1-258 Len: 376 Check: 6101 Weight: 1.00 Name: ENSTTRP00000009731/1-364 Len: 376 Check: 1676 Weight: 1.00 Name: ENSBTAP00000021265/1-346 Len: 376 Check: 8089 Weight: 1.00 Name: ENSP00000379643/1-335 Len: 376 Check: 4380 Weight: 1.00 Name: BACU012931/1-272 Len: 376 Check: 2862 Weight: 1.00 // 1 50 bmy_05432T0/1-258 ---------- ---------- ---------- MKLN------ -------WRR ENSTTRP00000009731/1-364 PAAAAAVAVA SSQPEGHHET RIVIFSPVFT MEDSGKTFSS EEEEANYWKN ENSBTAP00000021265/1-346 ---------- ---------- ---------- MADSGKTFSS EEEEANYWKD ENSP00000379643/1-335 ---------- ---------- ---------- MEDSGKTFSS EEEEANYWKD BACU012931/1-272 ---------- ---------- ---------- MEDSGKTFNS EGEEANYWKD 51 100 bmy_05432T0/1-258 SCNKLKPGTG TCCQKTTAFA ---------- ---------- ---------- ENSTTRP00000009731/1-364 LAMTYKQRAE NTQEELREFQ EGSREYEAEL ETQLQQIESR NRDLLSENNR ENSBTAP00000021265/1-346 LAMTYKQRAE NTQEELREFQ EESREYEAEL ETQLQQTESK NRDLLMENNH ENSP00000379643/1-335 LAMTYKQRAE NTQEELREFQ EGSREYEAEL ETQLQQIETR NRDLLSENNR BACU012931/1-272 LAMTYKQRAE NTQEELREFQ EGSREYEAEL ETQLQQIETR NRDLLSENNR 101 150 bmy_05432T0/1-258 ---------- --WSWKPSSF ACLSP----- ---------- ---------- ENSTTRP00000009731/1-364 LRMELETIKX XXXXXXXXXX XXXXXXXXDL AQTKAIKDQL QKYIRELEQA ENSBTAP00000021265/1-346 LRMELETIKE KFKTQHSEGY RQISALEDDL AQTKAIKDKL QKYIRELEQA ENSP00000379643/1-335 LRMELETIKE KFEVQHSEGY RQISALEDDL AQTKAIKDQL QKYIRELEQA BACU012931/1-272 LRVELETIKE KFETQHSEGY RQISALEDDL AQTKAIKDQL QKYIRELEQA 151 200 bmy_05432T0/1-258 --------RA TIMSLEDFEQ RLNQAIERNA FLESELDEKE NLLESVQRLK ENSTTRP00000009731/1-364 NDDLERAKRA TIMS-EDFEQ RLNQAIERNA FLESELDEKE NLLESAQRLK ENSBTAP00000021265/1-346 NDDLERAKRA TIMSLEDFEQ RLNQAIERNA FLESELDEKE NLLESVQRLK ENSP00000379643/1-335 NDDLERAKRA TIMSLEDFEQ RLNQAIERNA FLESELDEKE NLLESVQRLK BACU012931/1-272 NDDLERAKRA TIMSLEDFEQ RLNQAIERNA FLESELDEKE NLLESVQRLK 201 250 bmy_05432T0/1-258 DEARDLRQEL AVQQKQEKPR TPMPSSVEAE RTDTAVQATG SVPSTPIAHR ENSTTRP00000009731/1-364 DEARDLRQEL AVQQKQEKPR TPMPSSVEAE RTDTAVQATG SVPSTPIAHR ENSBTAP00000021265/1-346 DEARDLRQEL AVQQKQEKPR TPMPSSVDAE RTDTAVQATG SVPSTPIAHR ENSP00000379643/1-335 DEARDLRQEL AVQQKQEKPR TPMPSSVEAE RTDTAVQATG SVPSTPIAHR BACU012931/1-272 DEARDLRQEL AVQQKQEKPR TPMPSSVEAE RTDTAVQATG SVPSTPIAHR 251 300 bmy_05432T0/1-258 GPSSSLNTPG TFRRGLDDST GGTPLTPAAR ISALNIVGDL LRKVGALESK ENSTTRP00000009731/1-364 GPSSSLNTPG TFRRGLDDST GGTPLTPAAR ISALNIVGDL LRKVGALESK ENSBTAP00000021265/1-346 GPSSSLNTPG TFRRGLDDST GGTPLTPAAR ISALNIVGDL LRKVGALESK ENSP00000379643/1-335 GPSSSLNTPG SFRRGLDDST GGTPLTPAAR ISALNIVGDL LRKVGALESK BACU012931/1-272 GPSSSLNTPG TFRRGLDDST GGTPLTPAAR ISALNIVGDL LRKVGRLHEV 301 350 bmy_05432T0/1-258 LASCRNFVYD QSPNRPSGPT SGWGSKNRDG GDRRPGSTSV PLGDKGLGKR ENSTTRP00000009731/1-364 LASCRNFVYD QSPNRPSGPA SGWGSKNRDG GDRRPGSTSV PLGDKGLDTS ENSBTAP00000021265/1-346 LASCRNFVYD QSPGRASGPA SGRGSKNRDS VDRRPGGSNV PLGDKGLGKR ENSP00000379643/1-335 LASCRNLVYD QSPNRTGGPA SGRSSKNRDG GERRPSSTSV PLGDKGLDTS BACU012931/1-272 QV-------- ---------- ---------- ---------- ---------- 351 400 bmy_05432T0/1-258 LEFGKPPSNI SSPSLPSAQG VVKMLL ENSTTRP00000009731/1-364 CRWLSKSTTR SSSSC----- ------ ENSBTAP00000021265/1-346 LEFGKPSSNV SSPSLPSAQG VVKMLL ENSP00000379643/1-335 CRWLSKSTTR SSSSC----- ------ BACU012931/1-272 ---------- ---------- ------