KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:49 2014 Check: 00 .. Name: BACU018167/1-1333 Len: 1552 Check: 2330 Weight: 1.00 Name: ENSP00000373808/1-670 Len: 1552 Check: 6403 Weight: 1.00 Name: bmy_18935T0/1-339 Len: 1552 Check: 8529 Weight: 1.00 Name: ENSTTRP00000004931/1-670 Len: 1552 Check: 1199 Weight: 1.00 Name: ENSBTAP00000021301/1-670 Len: 1552 Check: 7919 Weight: 1.00 // 1 50 BACU018167/1-1333 ---------- ---------- ---------- -----MCFS- ---------- ENSP00000373808/1-670 MAFPVDMLEN CSHEELENSA EDYMSDLRCG DPENPECFSL LNITIPISLS bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 MAFPVDMLDN CSHEEMENSA EDYMSDLRCG DPENPECFSL LNITIPISLS ENSBTAP00000021301/1-670 MAFPVDMLDN CSHEELENSA EDYMSDLRCG DPENPERFSL LNITIPISLS 51 100 BACU018167/1-1333 ---------- ---------- ---------- ---------- ---------- ENSP00000373808/1-670 NVGFVPLYGG DQTQKILALF APEDSLTAVA LYLADQWWAI DDIVKTSVPS bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 NVGYVPLYGG DQTQKVLALF APEDSLTAVA LYLADQWWAI DDIVKTSVPS ENSBTAP00000021301/1-670 NVGFVPLYGG DQTQKVLALF APEDSLTAVA LYLADQWWAI DDIVKTSVPS 101 150 BACU018167/1-1333 ---------- ---------- ---------- ---------- ---------- ENSP00000373808/1-670 REGLKQVSTL GERVVLYVLN RIIYRKQEME RNEIPFLCHS STDYAKILWK bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 REGLKQVRTL GERVVLYVLN RIIYRKQEME RNEIPFLCHS STDYAKILWK ENSBTAP00000021301/1-670 REGLKQVRTL GERVVLYVLN RIIYRKQEME RNEIPFLCHS STDYAKILWK 151 200 BACU018167/1-1333 ---------- ---------- ---------- ---------- ---------- ENSP00000373808/1-670 KGEAIGFYSV KPTGSICASF LTQSYQLPVL DTMFLRKKYR GKDFGLHMLE bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 KGEAIGFYSV KPTGSICASF LTQSYQLPVL DTMFVRKKYR GKDFGLHMLE ENSBTAP00000021301/1-670 KGEAIGFYSV KPTGSTCASF LTQSYQLPVL DTMFVRKKYR GKDFGLHMLE 201 250 BACU018167/1-1333 ---------- ---------- ---ACNQYFE KYPGDHELLW EVEGVGHWYQ ENSP00000373808/1-670 DFVDSFTEDA LGLRYPLSSL MYTACKQYFE KYPGDHELLW EVEGVGHWYQ bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 DFVDSFTEDA LGLRYPLTSL MYIACNQYFE KYPGDHELLW EVEGVGHWYQ ENSBTAP00000021301/1-670 DFVDSFTEDA LGLRYPLTSL MYIACNQYFE KYPGDHELLW EVEGVGHWYQ 251 300 BACU018167/1-1333 RIPITRALQR ETFKITAVSQ NGAKRPVSGE YGLASVPDYE AGAEDSLSSE ENSP00000373808/1-670 RIPVTRALQR EALKILALSQ NEPKRPMSGE YGPASVPEYE ARTEDNQSSE bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 RIPITRALQR ETFKITAVSQ NEAKRPVSGE YGLGSVPDYE AGAEDSLSSE ENSBTAP00000021301/1-670 RIPITRALQR ETLKITAISQ NEAKRSTSGE YSLASVPEYE ARAEDSQSSE 301 350 BACU018167/1-1333 MQLTIDSLKD AFASTSEGHD KTPVSTRTRS SHLKRPKIGK RFQDSEFSSS ENSP00000373808/1-670 MQLTIDSLKD AFASTSEGHD KTSVSTHTRS GNLKRPKIGK RFQDSEFSSS bmy_18935T0/1-339 MQLTIDSLKD AFASTSEGHD KTPVSTRTXS SHLKRPXIGK RFQDSEFSSS ENSTTRP00000004931/1-670 MQLTIDSLKD AFASTSEGHG KTPVSTRTRS SHLKRPKIGK RFQDSEFSSS ENSBTAP00000021301/1-670 MQLTIDSLKD AFASTSEGHD KTPVSTRTRS SHLKRPKIGK RFQDSEFSSS 351 400 BACU018167/1-1333 QGEDEKTPQT SPTASVNKLE STARTSESSE EFLEEEPEQT VIEFEDESSD ENSP00000373808/1-670 QGEDEKTSQT SLTASINKLE STARPSESSE EFLEEEPEQR GIEFEDESSD bmy_18935T0/1-339 QGEDEKTPQT SPTASVNKLE STARTSESSE EFLEEEPEXT VIEFEDESSD ENSTTRP00000004931/1-670 QGEDEKTPQT SPTASVNKLE STARTSESSE EFLEEEPEQS VIEFEDESSD ENSBTAP00000021301/1-670 QGEDEKTPQT SPTALVNKLE STARTSESSE EFLEEEPEQS VIEFEDESSD 401 450 BACU018167/1-1333 KNVRPAPETQ PGLEKQEGEK ESELEPMNGE IVDDTLKTSL ITEEEDSTSE ENSP00000373808/1-670 RDARPALETQ PQQEKQDGEK ESELEPMNGE IMDDSLKTSL ITEEEDSTSE bmy_18935T0/1-339 KNVRPAPETQ PGLEKQEGEK ESELEPMNGE IVDDTLKTSL ITEEEDSTSE ENSTTRP00000004931/1-670 KNVRPAPETQ PGLEKQEGEK ESESEPMNGE IMDDTLKTSL ITEEEDSTSE ENSBTAP00000021301/1-670 KDVEPAPETQ PGLEKQEGEK ESALEPMNGE IIDDTLKTSL ITEEEDSTSE 451 500 BACU018167/1-1333 VLGEELKLQS FNSSEDSTNL VPLVVESSKS PEAVAQXXXX XXXXXXXXXX ENSP00000373808/1-670 VLDEELKLQP FNSSEDSTNL VPLVVESSKP PEVDAPDKTP RIPDSEMLMD bmy_18935T0/1-339 VLGEELKLQS FNSSEDSTNL VPLVVESSKS PEAVAQDKTS HVTDSEMLLD ENSTTRP00000004931/1-670 VLGEELKLQS FNSSEDSTNL VPLVVESSKS PEAVAQDKTS HVTDSEMLLD ENSBTAP00000021301/1-670 VLDEELKLQS FNSSEDSPNL APLVVDSSQP LEGVAQDKTS HATDSETLLD 501 550 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 EGTSDEKGHM EEKLSLLPRK KAHLGSSDNV ATMSNEERSD GGFPNSVIAE bmy_18935T0/1-339 EGPSDDXGHT EERLPLVSRK KAHFGSSDNV ATIPNEERSD SGFPNSVITD ENSTTRP00000004931/1-670 EGPSDDKGHT EERLPLVSRK KAHFGSSDNV ATSPNEERSD SGFPNSVITE ENSBTAP00000021301/1-670 EGPSDDKGHT EEKLPLVSRK KAHFGSSDNV ATIPNEDRSD SAFPNSVIAE 551 600 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 FSEEPVSENL SPNTTSSLED QGEEGVSEPQ ETSTALPQSS LIEVELEDVP bmy_18935T0/1-339 FSEELIPENV SPNTTASLED QGEEGVAEPQ ETSPAVPQSS LIEVELEDVP ENSTTRP00000004931/1-670 FSEESIPENV SPNTTASLED QGEEGVAEPQ ETSPALPQSS LIEVELEDVP ENSBTAP00000021301/1-670 FSEESIPENV SPNTTASLED QGEEGVAEPQ ESSAALPQSS LIEVELEDVP 601 650 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 FSQNAGQKNQ SEEQSEASSE QLDQFTQSAE KAVDSSSEEI EVEVPVVDRR bmy_18935T0/1-339 FAQNAGQKQQ SEEQSEASSE QL-------- --ISGHNQQR RLWIAAQRR- ENSTTRP00000004931/1-670 FSQNAGQKNQ SEEQSEASSE QLDQLTQSTE KTVDSSSEEI EVEVPVVDRR ENSBTAP00000021301/1-670 FSQNAGQKNL SEEQSEASSE QLDQLTQSTE KTVDSSSEEI EVEVPVVDRR 651 700 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 NLRRKAKGHK GPAKKKA--- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 NLRRKAKGHK GPAKKKA--- ---------- ---------- ---------- ENSBTAP00000021301/1-670 NLRRKAKGHK GPAKKKA--- ---------- ---------- ---------- 701 750 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 751 800 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 801 850 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 851 900 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 901 950 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 951 1000 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1001 1050 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1051 1100 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1101 1150 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1151 1200 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1201 1250 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1251 1300 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1301 1350 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1351 1400 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1401 1450 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1451 1500 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------- bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------- 1501 1550 BACU018167/1-1333 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXDLK ENSP00000373808/1-670 ---------- ---------- ---------- ---------- ---------K bmy_18935T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004931/1-670 ---------- ---------- ---------- ---------- ---------K ENSBTAP00000021301/1-670 ---------- ---------- ---------- ---------- ---------K 1551 1600 BACU018167/1-1333 LR ENSP00000373808/1-670 LT bmy_18935T0/1-339 -- ENSTTRP00000004931/1-670 LT ENSBTAP00000021301/1-670 LT