KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:50 2014 Check: 00 .. Name: ENSBTAP00000021304/1-374 Len: 403 Check: 7838 Weight: 1.00 Name: ENSP00000296412/1-374 Len: 403 Check: 9148 Weight: 1.00 Name: bmy_16082T0/1-382 Len: 403 Check: 6951 Weight: 1.00 Name: BACU018633/1-370 Len: 403 Check: 3597 Weight: 1.00 Name: ENSTTRP00000002360/1-370 Len: 403 Check: 2295 Weight: 1.00 // 1 50 ENSBTAP00000021304/1-374 MANQVIKCKA AVAWEAGKPL SIEEVEVAPP KAHEVRIKII ATAVCHTDAY ENSP00000296412/1-374 MANEVIKCKA AVAWEAGKPL SIEEIEVAPP KAHEVRIKII ATAVCHTDAY bmy_16082T0/1-382 MASQVIKCKA AVAWEARKPL SIEEIEVAPP KAHEVRIKII ATAVCHTDAY BACU018633/1-370 ----VIKCKA AVAWEARKPL SIEEIEVAPP KAHEVRIKII ATAVCHTDAY ENSTTRP00000002360/1-370 ----VIKCKA AVAWEARKPL SIEEIEVAPP KAHEVRIKII ATAVCHTDAY 51 100 ENSBTAP00000021304/1-374 TLSGADPEGN YPVILGHEGA GIVESVGEGV TKLKAGDTVI PLYIPQCGEC ENSP00000296412/1-374 TLSGADPEGC FPVILGHEGA GIVESVGEGV TKLKAGDTVI PLYIPQCGEC bmy_16082T0/1-382 TLSGADPEGS FPVILGHEGA GIVESVGEGV TKLKAG---- SVRMMSC--- BACU018633/1-370 TLSGADPEGS FPVILGHEGA GIVESVGEGV TKLKAGDTVI PLYIPQCGEC ENSTTRP00000002360/1-370 TLSGADPEGS FPVILGHEGA GIVESVGEGV TKLKAGDTVI PLYIPQCGEC 101 150 ENSBTAP00000021304/1-374 KFCLNPKTNL CQKIRVTQGK GLMPDGTSRF TCKGKTILHY MGTSTFSEYT ENSP00000296412/1-374 KFCLNPKTNL CQKIRVTQGK GLMPDGTSRF TCKGKTILHY MGTSTFSEYT bmy_16082T0/1-382 ---------- ----RVTQGK GLMPDGTSRF TCKGKTILHY MGTSTFSEYT BACU018633/1-370 KFCLNPKTNL CQKIRVTQGK GLMPDGTSRF TCKGKTILHY MGTSTFSEYT ENSTTRP00000002360/1-370 KFCLNPKTNL CQKIRVTQGK GLMPDGTSRF TCKGKTILHY MGTSTFSEYT 151 200 ENSBTAP00000021304/1-374 VVADISVAKI DPLAPLDKVC LLGCGISTGY GAALNAAKVE PGSTCAVFGL ENSP00000296412/1-374 VVADISVAKI DPLAPLDKVC LLGCGISTGY GAAVNTAKLE PGSVCAVFGL bmy_16082T0/1-382 VVADISVAKI DPLAPLDKVC LLGCGISTGY GAAVNTAKVE PGSTCAVFGL BACU018633/1-370 VVADISVAKI DPLAPLDKVC LLGCGISTGY GAAVNTAKVE PGSTCAVFGL ENSTTRP00000002360/1-370 VVADISVAKI DPLAPLDKVC LLGCGISTGY GAVVNTAKVE PGSTCAVFGL 201 250 ENSBTAP00000021304/1-374 GGVGLAVIMG CKMAGAARII GVDINKDKFA RAKEFGASEC INPQDFSKPI ENSP00000296412/1-374 GGVGLAVIMG CKVAGASRII GVDINKDKFA RAKEFGATEC INPQDFSKPI bmy_16082T0/1-382 GGVGLAVIMG CKVAGASRII GVDINKDKFT RAKEFGASEC INPQDFSKSI BACU018633/1-370 GGVGLAVIMG CKVAGASRII GVDINKDKFT RAKEFGASEC INPQDFSKSI ENSTTRP00000002360/1-370 GGVGLAVIMG CKVAGASRII GVDINKDKFT RAKEFGASEC INPQDFSKPI 251 300 ENSBTAP00000021304/1-374 QEVLIEMTDG GVDYSFECIG NVKVM----- ---------- ---------- ENSP00000296412/1-374 QEVLIEMTDG GVDYSFECIG NVKVM----- ---------- ---------- bmy_16082T0/1-382 QEVLVEMTDG GVDYSFECIG NVKVMLCTTT LSPGSFWGSR YSQHNALTSV BACU018633/1-370 QEVLVEMTDG GVDYSFECIG NVKVM----- ---------- ---------- ENSTTRP00000002360/1-370 QEVLVEMTDG GVDYSFECIG NVKVM----- ---------- ---------- 301 350 ENSBTAP00000021304/1-374 ----RAALEA CHKGWGISVV VGVAASGEEI ATRPFQLVTG RTWKGTAFGG ENSP00000296412/1-374 ----RAALEA CHKGWGVSVV VGVAASGEEI ATRPFQLVTG RTWKGTAFGG bmy_16082T0/1-382 ICLQRAALEA CHKGWGVSVV VGVAASGEEV ATRPFQLVTG RTWKGTAFGG BACU018633/1-370 ----RAALEA CHKGWGVSVV VGVAASGEEV ATRPFQLVTG RTWKGTAFGG ENSTTRP00000002360/1-370 ----RAALEA CHKGWGVSVV VGVAASGEEV ATRPFQLVTG RTWKGTAFGG 351 400 ENSBTAP00000021304/1-374 WKSVESVPKL VSEYMSKKIK VDEFVTHSLP FDQINEAFDL MHAGKSIRTV ENSP00000296412/1-374 WKSVESVPKL VSEYMSKKIK VDEFVTHNLS FDEINKAFEL MHSGKSIRTV bmy_16082T0/1-382 WKSVESVPKL VSEYMSKKIK VDEFVTHNLP FDQINEAFEL MHAGKSIRTV BACU018633/1-370 WKSVESVPKL VSEYMSKKIK VDEFVTHNLP FDQINEAFEL MHAGKSIRTV ENSTTRP00000002360/1-370 WKSVESIPKL VSEYMSKKIK IEEFVTHNLP FDQINEAFEL MHAGKSIRTV 401 450 ENSBTAP00000021304/1-374 VKL ENSP00000296412/1-374 VKI bmy_16082T0/1-382 VKL BACU018633/1-370 VKL ENSTTRP00000002360/1-370 LKL