KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:55 2014 Check: 00 .. Name: ENSP00000258742/1-423 Len: 425 Check: 7546 Weight: 1.00 Name: ENSBTAP00000021317/1-420 Len: 425 Check: 4166 Weight: 1.00 Name: bmy_14518T0/1-404 Len: 425 Check: 4931 Weight: 1.00 Name: ENSTTRP00000012147/1-420 Len: 425 Check: 4640 Weight: 1.00 Name: BACU003153/1-420 Len: 425 Check: 5934 Weight: 1.00 // 1 50 ENSP00000258742/1-423 MAICQFFLQG RCRFGDRCWN EHPGARGAGG GRQQPQQQPS GNNRRGWNTT ENSBTAP00000021317/1-420 MTICQFFLQG RCRFGDRCWN EHPGPRGAGG GR---QQQPS GSNRRGWNTT bmy_14518T0/1-404 MTICQFFLQG RCRFGDRCWN EHPGAGGLGE GR---QQQLS GSNRRGWNTT ENSTTRP00000012147/1-420 MTICQFFLQG RCRFGNRCWN EHPGAGGAGE GR---QQQFS GSNRRGWNTT BACU003153/1-420 MTICQFFLQG RCRFGDRCWN EHPGAGGLGE GR---QQQLS GSNRRGWNTT 51 100 ENSP00000258742/1-423 SQRYSNVIQP SSFSKSTPWG GSRDQEKPYF SSFDSGASTN RKEGFGLSEN ENSBTAP00000021317/1-420 NQRYSSVIQP SSFSKPTPWG GSRDQEKPSF ATFDSGESAS KNRGFGLSQN bmy_14518T0/1-404 SQRYSSVIQP SSFSKSTPWG GSRDQEKPSF ASFDSGASAS RNSGFGLSQN ENSTTRP00000012147/1-420 SQRYSSVIQP SSFSKSTPWG GSKDQEKPSF APFDSGASAS RNRGFGWSQN BACU003153/1-420 SQRYSSVIQP SSFSKSTPWG GSRDQEKPSF ASFDSGASAS RNSGFGLSQN 101 150 ENSP00000258742/1-423 PFASLSPDEQ KDEKKLLEGI VKDMEVWESS GQWMFSVYSP VKKKPNISGF ENSBTAP00000021317/1-420 PFASPGSDDQ KDDKKLLEGI VKDMEVWESS GQWMFSSYSP VKKKPNISGF bmy_14518T0/1-404 PFASPNSDGQ KDEKKLLEGI VKDMEVWESS GQWMFSVYSP VKKKPNISGF ENSTTRP00000012147/1-420 PFASPSSDGQ KDEKKLLEGI VKDMEVWESS GQWMFSVYSP VKKKPNISGF BACU003153/1-420 PFASPNSDGQ KDEKKLLEGI VKDMEVWESS GQWMFSVYSP VKKKPNISGF 151 200 ENSP00000258742/1-423 TDISPEELRL EYHNFLTSNN LQSYLNSVQR LINQWRNRVN ELKSLNISTK ENSBTAP00000021317/1-420 TDISPEELRL EYHNFLTSNN LQSYLNSVQQ LINQWRNRVN ELKSLNTSTA bmy_14518T0/1-404 TDISPEELRL EYRNFLTSNN LQSYLHSIQQ LINQWRNRVN ELKSLNTSTT ENSTTRP00000012147/1-420 TDISPEELRL EYHNFLTSNN LQSYLHSIQQ LINQWRNRVN ELKSLNTSTT BACU003153/1-420 TDISPEELRL EYHNFLTSNN LQSYLHSIQQ LINQWRNRVN ELKSLNTSTT 201 250 ENSP00000258742/1-423 VALLSDVKDG VNQAAPAFGF GSSQAATFMS PGFPVNNSSS DNAQNFSFKT ENSBTAP00000021317/1-420 IALLSDLQDG VNQATPSFGF GNRQTVTFGS PGFPVNNSSS NSAQNFSFKP bmy_14518T0/1-404 IALLSDIKGG VNQAAPAFGF GSRPSVTFGS PGFPVNNNSS INAQNFSFKP ENSTTRP00000012147/1-420 IALLSDIKGG VNQAAPAFGF GSRPSVTFGS PGFPVNNNSS ISAQNFSFKP BACU003153/1-420 IALLSDIKGG VNQAAPTFGF GSRPSVTFGS PGFPVNNNSS INAQNFSFKP 251 300 ENSP00000258742/1-423 NSGFAAASSG SPAGFGSSPA FGAAASTSSG ISTSAPAFGF GKPEVTSAAS ENSBTAP00000021317/1-420 SPGFATAPSG SPPVFGNTPA FGAVPASSSA IAAATPTFGL RKPEITSAAS bmy_14518T0/1-404 SSGFATAPSG SPSVFGNTPA FGAVPSANSA ITASTPAFGL GKPQITSAAS ENSTTRP00000012147/1-420 SSGFATAPSG SPSVFGSTPA FGAVPSASSA ITASTPAFGL GKPQITSAAS BACU003153/1-420 SSGFATAPSG NPSVFGNTPA FGAVPSANSA ITASTPAFGL GKPQITSAAS 301 350 ENSP00000258742/1-423 FSFKSPAASS FGSPGFSGLP ASLATGPVRA PVAPAFGGGS SVAGFGSPGS ENSBTAP00000021317/1-420 FSFKTPAASG FGSSGFSGFS PSMAASPVGS PVAPAFGSGS SIAGFGSPGS bmy_14518T0/1-404 FSFKSPAASG FGSSGFSGFP APMAAGPVGA PEAPAFGSGS SSAGFGSLGS ENSTTRP00000012147/1-420 FSFKSPAASG FGSSGFSGFP ASTAAGPVGA PEAPAFGSGS SSAGFGSPGS BACU003153/1-420 FSFKSPAASG FGSSGFSAFP APMAVGPVGA PETPAFGSGS SSARFGSLGS 351 400 ENSP00000258742/1-423 HSHTAFSKPS SDTFGNSSIS TSLSASSSI- -IATDNVLFT PRDKLTVEEL ENSBTAP00000021317/1-420 QPHTAFSKSS SDTFGNSSIP TSLSFSLGS- -TSTDNALFT PKDQLTAEEL bmy_14518T0/1-404 QSHTAFSKS- ---------S TIMAMKTGRL ISSVSDLSIT PPTCHIVCSC ENSTTRP00000012147/1-420 QSHTAFSKSS SDTFGNSSIS TSLSFSNGS- -TTTDNVLFT PRDQLTAEEQ BACU003153/1-420 QSHTAFSKSS SGTFGNSSIS TSLSFSNGS- -TTTDNVLFT PKDQLTAEEL 401 450 ENSP00000258742/1-423 EQFQSKKFTL GKIPLKPPPL ELLNV ENSBTAP00000021317/1-420 EQFQSKKFAL GKIPLKPPPV EFLNI bmy_14518T0/1-404 DHYEEEK--- -----GGGDT GGCNV ENSTTRP00000012147/1-420 EQFQSKKFTL GKIPLKPPPV ELLNI BACU003153/1-420 EQFQSKKFTL GKIPLKPPPV ELLNI