KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:01 2014 Check: 00 .. Name: ENSTTRP00000004434/1-340 Len: 379 Check: 2458 Weight: 1.00 Name: ENSP00000229264/1-340 Len: 379 Check: 5483 Weight: 1.00 Name: ENSBTAP00000021348/1-340 Len: 379 Check: 6328 Weight: 1.00 Name: bmy_11485T0/1-335 Len: 379 Check: 274 Weight: 1.00 Name: BACU018264/1-340 Len: 379 Check: 6933 Weight: 1.00 // 1 50 ENSTTRP00000004434/1-340 MGEMEQLRQE AEQLKKQIAD ARKACADTTL AEXXXXXXXX XXXXXXXXXX ENSP00000229264/1-340 MGEMEQLRQE AEQLKKQIAD ARKACADVTL AELVSGLEVV GRVQMRTRRT ENSBTAP00000021348/1-340 MGEMEQLRQE AEQLKKQIAD ARKACADTTL AELVSGLEVV GRVQMRTRRT bmy_11485T0/1-335 ---------- ---------- ---------- ---------- ----MRTRRT BACU018264/1-340 MGEMEQLRQE AEQLKKQIAD ARKACADVTL AELVSGLEVV GRVQMRTRRT 51 100 ENSTTRP00000004434/1-340 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXYTTNK- ---------- ENSP00000229264/1-340 LRGHLAKIYA MHWATDSKLL VSASQDGKLI VWDSYTTNK- ---------- ENSBTAP00000021348/1-340 LRGHLAKIYA MHWATDSKLL VSASQDGKLI VWDTYTTNK- ---------- bmy_11485T0/1-335 LRGHLAKIYA MHWATDSKLL VSASQDGKLI VWDTYTTNKV PALSPGPSAT BACU018264/1-340 LRGHLAKIYA MHWATDSKLL VSASQDGKLI VWDTYTTNK- ---------- 101 150 ENSTTRP00000004434/1-340 ---------- ---------- --------VH AIPLRSSWVM TCAYAPSGNF ENSP00000229264/1-340 ---------- ---------- --------VH AIPLRSSWVM TCAYAPSGNF ENSBTAP00000021348/1-340 ---------- ---------- --------VH AIPLRSSWVM TCAYAPSGNF bmy_11485T0/1-335 LLPGGVLLPF SALHLGAQRR PPLPRPPQVH AIPLRSSWVM TCAYAPSGNF BACU018264/1-340 ---------- ---------- --------VH AIPLRSSWVM TCAYAPSGNF 151 200 ENSTTRP00000004434/1-340 VACGGLDNMC SIYSLKSREG NVKVSRELSA HTGYLSCCRF LDDNNIVTSS ENSP00000229264/1-340 VACGGLDNMC SIYNLKSREG NVKVSRELSA HTGYLSCCRF LDDNNIVTSS ENSBTAP00000021348/1-340 VACGGLDNMC SIYSLKSREG NVKVSRELSA HTGYLSCCRF LDDNNIVTSS bmy_11485T0/1-335 VACGGLDNMC SIYSLKSREG NVKVSRELSA HTGYLSCCRF LDDNNIVTSS BACU018264/1-340 VACGGLDNMC SIYSLKSREG NVKVSRELSA HTGYLSCCRF LDDNNIVTSS 201 250 ENSTTRP00000004434/1-340 GDTTCALWDI ETGQQKTVFV GHTGDCMSLA VSPDFKLFIS GACDASAKLW ENSP00000229264/1-340 GDTTCALWDI ETGQQKTVFV GHTGDCMSLA VSPDFNLFIS GACDASAKLW ENSBTAP00000021348/1-340 GDTTCALWDI ETGQQKTVFV GHTGDCMSLA VSPDFRLFIS GACDASAKLW bmy_11485T0/1-335 GDTTCALWDI ETGQQKTVFV GHTGDCMSLA VSPDFRLFIS GACDASAKLW BACU018264/1-340 GDTTCALWDI ETGQQKTVFV GHTGDCMSLA VSPDFKLFIS GACDASAKLW 251 300 ENSTTRP00000004434/1-340 DVREGTCRQT FTGHESDINA ICFFPNGEAI CTGSDDASCR LFDLRADQEL ENSP00000229264/1-340 DVREGTCRQT FTGHESDINA ICFFPNGEAI CTGSDDASCR LFDLRADQEL ENSBTAP00000021348/1-340 DVREGTCRQT FTGHESDINA ICFFPNGEAI CTGSDDASCR LFDLRADQEL bmy_11485T0/1-335 DVREGTCRQT FTGHESDINA ICFFPNGEAI CTGSDDASCR LFDLRADQEL BACU018264/1-340 DVREGTCRQT FTGHESDINA ICFFPNGEAI CTGSDDASCR LFDLRADQEL 301 350 ENSTTRP00000004434/1-340 TTYSHESIVC GITSVAFSLS GRLLFAGYDD FNCNVWDSMK CERVGILSGH ENSP00000229264/1-340 ICFSHESIIC GITSVAFSLS GRLLFAGYDD FNCNVWDSMK SERVGILSGH ENSBTAP00000021348/1-340 TTYAHESIIC GITSVAFSLS GRLLFAGYDD FNCNVWDSMK CERVGILSGH bmy_11485T0/1-335 TTYFHESIVC GITSVAFSLS GRLLFAGYDD FNCNVWDSMK CERVGILSGH BACU018264/1-340 TTYFHESIVC GITSVAFSLS GRLLFAGYDD FNCNVWDSMK CERVGILSGH 351 400 ENSTTRP00000004434/1-340 DNRVSCLGVT ADGMAVATGS WDSFLKIWN ENSP00000229264/1-340 DNRVSCLGVT ADGMAVATGS WDSFLKIWN ENSBTAP00000021348/1-340 DNRVSCLGVT ADGMAVATGS WDSFLKIWN bmy_11485T0/1-335 DNRVSCLGVT ADGMAVATGS WDSFLKIWN BACU018264/1-340 DNRVSCLGVT ADGMAVATGS WDSFLKIWN