KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:03 2014 Check: 00 .. Name: ENSP00000353945/1-772 Len: 780 Check: 9356 Weight: 1.00 Name: ENSBTAP00000021357/1-771 Len: 780 Check: 7138 Weight: 1.00 Name: bmy_14611T0/1-737 Len: 780 Check: 375 Weight: 1.00 Name: ENSTTRP00000013257/1-772 Len: 780 Check: 2755 Weight: 1.00 Name: BACU013520/1-772 Len: 780 Check: 3416 Weight: 1.00 // 1 50 ENSP00000353945/1-772 MAEAHQAVAF QFTVTPDGVD FRLSREALKH VYLSGINSWK KRLIRIKNGI ENSBTAP00000021357/1-771 MAEAHQAVAF QFTVTPEGVD FQLSREVLKH IYLSVIRSWK KRLIRIKNGI bmy_14611T0/1-737 MAEAHQAVAF QFTVTPEGVD FRLSREALKH IYLSGINSWK RRLIRIKNGI ENSTTRP00000013257/1-772 MAEAHQAVAF QFTVTPEGVD FRLSREALKH IYLSGINSWK KRLIRIKNGI BACU013520/1-772 MAEAHQAVAF QFTVTPEGVD FRLSREALKH IYLSGINSWK RRLIRIKNGI 51 100 ENSP00000353945/1-772 LRGVYPGSPT SWLVVIMATV GSSFCNVDIS LGLVSCIQRC LPQGCGPYQT ENSBTAP00000021357/1-771 LRGVYPGSPT SWLVVVMATA GSSYYNVDIS MGLVYYIQRW LPEG-RPYRT bmy_14611T0/1-737 LRGVYPGSPT SWLVVVMTTL GSSYCNVDIS MGLICFIQRW LPEGCGPYRT ENSTTRP00000013257/1-772 LRGVYPGSPT SWLFVVMTTL GSSYCNVDIS MGLVCFIQRW LPEGCGPYRS BACU013520/1-772 LRGVYPGSPT SWLVVVMTTL GSSYCNVDIS MGLICFIQRW LPEGCGPYRT 101 150 ENSP00000353945/1-772 PQTRALLSMA IFSTGVWVTG IFFFRQTLKL LLCYHGWMFE MHGKTSNLTR ENSBTAP00000021357/1-771 PYTRTLFSMA IFSTGVWMMG IFFFRQTLKL LLSYHGWMFE LHGQTSHLTR bmy_14611T0/1-737 PQTRTLLSVA IFSTGVWMMG ILFFRQTLKL LLSYHGWMFE MHGQTSHFTK ENSTTRP00000013257/1-772 PETRTLLSMA IFSTGVWMTG ILFFRQALKL LLSYHGWLFE MHGQISHFTR BACU013520/1-772 PQTRTLLSVA IFSTGVWMMG ILFFRQTLKL LLSYHGWMFE MHGQTSHFTK 151 200 ENSP00000353945/1-772 IWAMCIRLLS SRHPMLYSFQ TSLPKLPVPR VSATIQRYLE SVRPLLDDEE ENSBTAP00000021357/1-771 VWAVCVRLLS GRRPMLYSFQ TSLPKLPVPS VPATVHRYLE SVEHLLDDEQ bmy_14611T0/1-737 VWAMCVRLLS GRRPMLYSFQ TSLPKLPVPS VSATIHRYLE SVKHLLDDKE ENSTTRP00000013257/1-772 VWAMCVRLLS GQRPMLYSFQ TSLPKLPVPS VSATIHRYLE SVQHLLDDEE BACU013520/1-772 VWAMCVRLLS GRRPMLYSFQ TSLPKLPVPS VSATIHRYLE SVKHLLDDKE 201 250 ENSP00000353945/1-772 YYRMELLAKE FQDKTAPRLQ KYLVLKSWWA SNYVSDWWEE YIYLRGRSPL ENSBTAP00000021357/1-771 YYRMETLAKE FEEKTAPRLQ KYLVLKSWWA TNYVSDWWEE YVYLRGRNPI bmy_14611T0/1-737 YYRMEMLAKE FQEKTAPRLQ KYLVLKSWWA TNYVSDWWEE YVYLKGRTPL ENSTTRP00000013257/1-772 YYRMETLAKE FQEKTAPRLQ KYLVLKSWWA ANYVSDWWEE YVYLRGRTPL BACU013520/1-772 YYRMETLAKE FQEKTAPRLQ KYLVLKSWWA TNYVSDWWEE YVYLKGRTPL 251 300 ENSP00000353945/1-772 MVNSNYYVMD LVLIKNTDVQ AARLGNIIHA MIMYRRKLDR EEIKPVMALG ENSBTAP00000021357/1-771 VVNSNYYVMD LVLVKNTDVQ AARLGNAVHA MITYRRKLDR EEIKPVMALG bmy_14611T0/1-737 MVNSNYYVMD LVLVKNADVQ AARLGNIVHA MIKYRHKLDR EEIKPVMVLG ENSTTRP00000013257/1-772 MVNSNYYVMD LVLVKNTDVQ AARLGNIVHA MIMYRRKLDR EEIKPVMALG BACU013520/1-772 MVNSNYYVMD LVLVKNADVQ AARLGNIVHA MIKYRHKLDR EEIKPVMVLG 301 350 ENSP00000353945/1-772 IVPMCSYQME RMFNTTRIPG KDTDVLQHLS DSRHVAVYHK GRFFKLWLYE ENSBTAP00000021357/1-771 LVPMCSYQME RMFNTTRIPG KDTDVLQHLP DSRHVAVYHK GRFFKVWLYE bmy_14611T0/1-737 IVPMCSYQME RMFNTTRIPG KDTDVLQHLT DSRHVAVYHK GRFFKLWLYE ENSTTRP00000013257/1-772 IVPMCSYQME RMFNTTRIPG KDTDVLQHLT DSRHVAVYHK GRFFKLWLYE BACU013520/1-772 IVPMCSYQME RMFNTTRIPG KDTDVLQHLT DSRHVAVYHK GRFFKLWLYE 351 400 ENSP00000353945/1-772 GARLLKPQDL EMQFQRILDD PSPPQPGEEK LAALTAGGRV EWAQARQAFF ENSBTAP00000021357/1-771 GSRLLKPRDL EMQFQRILDD PSPPQPGEER LAALTAGGRV EWAQARQAFF bmy_14611T0/1-737 GSRLLKPRDL EMQFQRILDD PSPPQPGEEK LAALTAGGRA EWAQVRQAFF ENSTTRP00000013257/1-772 GSRLLKPRDL EMQFQRILDD PSPPQPGEER LAALTAGGRV EWAQVRQAFF BACU013520/1-772 GSRLLKPRDL EMQFQRILDD PSPPQPGEEK LAALTAGGRA EWAQVRQAFF 401 450 ENSP00000353945/1-772 SSGKNKAALE AIERAAFFVA LDEESYSYDP EDEASLSLYG KALLHGNCYN ENSBTAP00000021357/1-771 SSGKNKAALD AIERAAFFVA LDEESHHYDP EDEASLSLYG KALLHGNCYN bmy_14611T0/1-737 GSGKNKAALD AIERAAFFVA LDEESHRYDP EDEASLSLYG KALLHGSCYN ENSTTRP00000013257/1-772 SSGKNKAALD AIERAAFFVA LDEESHRYDP EDEASLSLYG KALLHGSCYN BACU013520/1-772 GSGKNKAALD AIERAAFFVA LDEESHRYDP EDEASLSLYG KALLHGSCYN 451 500 ENSP00000353945/1-772 RWFDKSFTLI SFKNGQLGLN AEHAWADAPI IGHLWEFVLG TDSFHLGYTE ENSBTAP00000021357/1-771 RWFDKSFTLI SFKNGQLGLN TEHAWADAPI IGHLWEFVLG TDSFHLGYTE bmy_14611T0/1-737 ---------- ---------- ---------- ---------- --SFDLGYTE ENSTTRP00000013257/1-772 RWFDKSFTLI AFKNGQLGLN TEHAWADAPI IGHLWEFVLG TDSFDLGYSE BACU013520/1-772 RWFDKSFTLI AFKNGQLGLN TEHAWADAPI IGHLWEFVLG TDSFDLGYTE 501 550 ENSP00000353945/1-772 TGHCLGKPNP ALAPPTRLQW DIPKQCQAVI ESSYQVAKAL ADDVELYCFQ ENSBTAP00000021357/1-771 TGHCLGKPNP VLPPPQRLQW DIPKQCQAVI ESSYQVAKAL ADDVELYCFQ bmy_14611T0/1-737 TGHCLGKPNA VLAPPQRLQW DIPEQCQAVI ESSYRVAKAL ADDVELYCFQ ENSTTRP00000013257/1-772 TGHCLGTPNP ALAPPQRLQW DIPEQCQAVI ESSYQVAKAL ADDVELYCFQ BACU013520/1-772 TGHCLGKPNP VLAPPQRLQW DIPEQCQAVI ESSYQVAKAL ADDVELYCFQ 551 600 ENSP00000353945/1-772 FLPFGKGLIK KCRTSPDAFV QIALQLAHFR DRGKFCLTYE ASMTRMFREG ENSBTAP00000021357/1-771 FLPFGKGLIK KCRTSPDAFV QIALQLAHFR DRGKFCLTYE ASMTRMFREG bmy_14611T0/1-737 FLPFGKGLIK KCRTSPDAFV QIALQLAHFR DRGRLCLTYE ASMTRMFREG ENSTTRP00000013257/1-772 FLPFGKGLIK KCRTSPDAFV QIALQLAYFR DRGKFCLTYE ASMTRMFREG BACU013520/1-772 FLPFGKGLIK KCRTSPDAFV QIALQLAHFR DRGRLCLTYE ASMTRMFREG 601 650 ENSP00000353945/1-772 RTETVRSCTS ESTAFVQAMM EGSHTKADLR DLFQKAAKKH QNMYRLAMTG ENSBTAP00000021357/1-771 RTETVRSCTR ESTAFVQAMV QGRHLNEDLQ RLFRKAAEKH QNMYRLAMTG bmy_14611T0/1-737 RTETVRSCTC ESTAFVRAMA QGRHLKADLQ DLFRKAAEKH QNMYRLAMTG ENSTTRP00000013257/1-772 RTETVRSCTC ESTAFVQAMV QGRHLKANLQ DLFRKAAEKH QNACRLAMTG BACU013520/1-772 RTETVRSCTC ESTAFVRAMA QGRHLKADLQ DLFRKAAEKH QNMYRLAMTG 651 700 ENSP00000353945/1-772 AGIDRHLFCL YLVSKYLGVS SPFLAEVLSE PWRLSTSQIP QSQIRMFDPE ENSBTAP00000021357/1-771 AGIDRHLFCL YVVSKYLGVE SPFLAEVLSE PWRLSTSQIA QFQIRMFDPN bmy_14611T0/1-737 AGIDRHLFCL YVVSKYLGVK SPFLAEVLSE PWRLSTSQTA QFQIRMFDPN ENSTTRP00000013257/1-772 AGIDRHLFCL YVVSKFLGVS SPFLAEVLSE PWRLSTSQTA QFQIRMFDPN BACU013520/1-772 AGIDRHLFCL YVVSKYLGVQ SPFLAEVLSE PWRLSTSQTA QFQIRMFDPN 701 750 ENSP00000353945/1-772 QHPNHLGAGG GFGPVADDGY GVSYMIAGEN TIFFHISSKF SSSETNAQRF ENSBTAP00000021357/1-771 KYPKHLGAGG GFGPVADDGY GVSYMIAGEN TIFFHVSSKF SSSETNAQRF bmy_14611T0/1-737 QYPNHLGAGG GFGPVANDGY GVSYMIAVQA TWMAYDMVVM RTNPTLAESM ENSTTRP00000013257/1-772 KYPNHLGAGG GFGPVANDGY GVSYMIAGEN TIFFHVSSKF SSSETNAQRF BACU013520/1-772 QYPNHLGAGG GFGPVANDGY GVSYMIAGEN TIFFHVSSKF SSSETNAQRF 751 800 ENSP00000353945/1-772 GNHIRKALL- -------DIA DLFQVPKAYS ENSBTAP00000021357/1-771 GNQIRQALL- -------DIA NLFQVPKADG bmy_14611T0/1-737 -RRLEGAFLS CKEEMEKNWQ ELLDETKRAQ ENSTTRP00000013257/1-772 GNHIRQALL- -------DIA DLFQVPKADS BACU013520/1-772 GNHIRQALL- -------DIA DLFQVPKADS