KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:04 2014 Check: 00 .. Name: ENSBTAP00000021363/1-344 Len: 362 Check: 1054 Weight: 1.00 Name: ENSP00000245312/1-348 Len: 362 Check: 9430 Weight: 1.00 Name: ENSTTRP00000007601/1-349 Len: 362 Check: 2204 Weight: 1.00 Name: bmy_01373T0/1-345 Len: 362 Check: 1536 Weight: 1.00 Name: BACU017433/1-358 Len: 362 Check: 8710 Weight: 1.00 // 1 50 ENSBTAP00000021363/1-344 MDNSMVCLAN ATVCNGTSCL VPESNFNAIL STILSAVLTV ILRNAIFQQN ENSP00000245312/1-348 MNDPNSCVDN ATVCSGASCV VPESNFNNIL SVVLSTVLTI LLALVMFSMG ENSTTRP00000007601/1-349 MNNSTVCLAN ATVCDGASCV LPEDDFNTTL SVVLSTVLTI LLSLVMFSMG bmy_01373T0/1-345 MNNSTVCLAN ATVCDGASCV VPESDFNTTL SVVLSTVLTI LLSLVMFSMG BACU017433/1-358 MNNSTVCLAS ATVCDGASCV VPGSDFNATL SVVLSTVLTI LLSLVMFSMG 51 100 ENSBTAP00000021363/1-344 KNILLNIFSN FRKRFANIFF SFLLCVHCYL SCSRLTLGLI ANSKQFLPFQ ENSP00000245312/1-348 CNVEIKKFLG HIKRPWGICV GFL----CQF GIMPLTGFIL SVAFDILPLQ ENSTTRP00000007601/1-349 CNVEIEKFLG HIKRPWGICV GFL----CQF GIMPLTGFIL SVTFDILPIQ bmy_01373T0/1-345 CNVEIKKFLG HIKQPWGICI GFL----CQF GIMPLTGFVL SVTFDILPIQ BACU017433/1-358 CNVEIKKFLG HIKQPWGICV GFL----CQF GIMPLTGFVL SVTFDILPIQ 101 150 ENSBTAP00000021363/1-344 PHICPALMLL GGGSRNNLTA LRLEKQWKVN VSMTTCSTLL ALGMMPLCLL ENSP00000245312/1-348 AVVVLIIGCC PGGTASNILA YWVDGDMDLS VSMTTCSTLL ALGMMPLCLL ENSTTRP00000007601/1-349 AVVVLIMGCC PGGTTSNILA YWVDGDMDLS ISMTTCSTLL ALGMMPLCLL bmy_01373T0/1-345 AVVVLIMGCC PGGTTSNILA YWADGDMDLS ISMTTCSTLL ALGMMPLCLL BACU017433/1-358 AVVVLIMGCC PGGTASNILA YWADGDMDLS ISMTTCSTLL ALGMMPLCLL 151 200 ENSBTAP00000021363/1-344 IYTKMWVDSG MIVIPYDNIG ISLVALVVPV SLGMYVNHKW PQKAKIILKI ENSP00000245312/1-348 IYTKMWVDSG SIVIPYDNIG TSLVSLVVPV SIGMFVNHKW PQKAKIILKI ENSTTRP00000007601/1-349 IYTKMWVDSG IIIIPYDKIG ISLVALIAPV SIGMFINHRW PDKAKIILKV bmy_01373T0/1-345 IYTKMWVDSG IILIPYDKIG ISLVTLVVPV SIGMFVNHRW PRKAKIILKI BACU017433/1-358 IYTKMWVDSG IILIPYDKIG ISLVTLVVPV SIGMFVNHRW PQKAKIILKV 201 250 ENSBTAP00000021363/1-344 GSITGALLIV LIAVVGGVLY RSAWIIQPRL WIIGTIFPIA GYSLGFFLAR ENSP00000245312/1-348 GSIAGAILIV LIAVVGGILY QSAWIIAPKL WIIGTIFPVA GYSLGFLLAR ENSTTRP00000007601/1-349 GSITGILLIV LIAVVGGVLY QSAWIIEPKL WVIGTLFPLA GYSLGFFLAR bmy_01373T0/1-345 GSITGALLIV LIAVVGGVLY QSAWIIEPKL WVIGTIFPLA GYSLG----- BACU017433/1-358 GSIAGALLIV LIAVVGGVLY QSAWIIEPKL WVIGTIFPLA GYSLGFFLAR 251 300 ENSBTAP00000021363/1-344 IAGQSWHRCR TVALETGMQN TQLCSTIVQL SFTPEELNLI FTFPLIYSIF ENSP00000245312/1-348 IAGLPWYRCR TVAFETGMQN TQLCSTIVQL SFTPEELNVV FTFPLIYSIF ENSTTRP00000007601/1-349 IAGQSWHRCR TVALETGMQN TQLCSTIVQL SFTTEELNLT FTFPLIYSIF bmy_01373T0/1-345 --------CR TVALETGMQN TQLCSTIVQL SFTTEELNLM FTFPLIYSIF BACU017433/1-358 IAGQSWHRCR TVALETGMQN TQLCSTIVQL SFTPEELNLI FTFPLIYSIF 301 350 ENSBTAP00000021363/1-344 QIIAAALFLA VYVVYKKYYR KNNVESPEGR DNEPV----- ---NEGFQPD ENSP00000245312/1-348 QLAFAAIFLG FYVAYKKCHG KNKAEIPESK ENGTEPESSF YKANGGFQPD ENSTTRP00000007601/1-349 QLIMAAIFLA LYIAYKKYYR KNNMELPEGK GNEPVPESSF QKENEGFQPD bmy_01373T0/1-345 QIIMAAVLLA LYVAYKKCYR KNNKELPEGK GSEPDPEASF QKANEGFQPD BACU017433/1-358 QIIMAAILLA LYVAYKKCYR KNNKELPEGK GTEPDPEASF QKANEGFQPD 351 400 ENSBTAP00000021363/1-344 EK-------- -- ENSP00000245312/1-348 EK-------- -- ENSTTRP00000007601/1-349 EKH------- -- bmy_01373T0/1-345 EKHTPVDQKE KF BACU017433/1-358 EKHTPVDQKE KF