KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:06 2014 Check: 00 .. Name: ENSP00000371471/1-361 Len: 377 Check: 7984 Weight: 1.00 Name: ENSBTAP00000021373/1-363 Len: 377 Check: 9503 Weight: 1.00 Name: ENSTTRP00000006885/1-307 Len: 377 Check: 1627 Weight: 1.00 Name: bmy_05583T0/1-376 Len: 377 Check: 4201 Weight: 1.00 Name: BACU016803/1-351 Len: 377 Check: 9054 Weight: 1.00 // 1 50 ENSP00000371471/1-361 MWVLTPAAFA GKLLSVFRQP LSSLWRSLVP LFCWLRATFW LLATKRRKQQ ENSBTAP00000021373/1-363 MWMLVPIAFA LKLLNVFLQP LGSVWSSLGP LFLQLRAASW LAGGERSRPL ENSTTRP00000006885/1-307 MWMLVPVSFT LKLLSAFVQH LGSMWSSLGT LFPRLSTAFW LAGGQKSQQQ bmy_05583T0/1-376 MWMLEPLSFT VKLLSAFLQP LGSLWSSLGA LFPRLRAAFW LAGGKKSQQQ BACU016803/1-351 MWMLVPVSFT LKLLSAFLQP LGSLWSSLRA LLPRLRAAFW LAGGKKSQQQ 51 100 ENSP00000371471/1-361 LVLRGPDET- KEEEED-PPL PTTPTSVNYH FTRQCNYKCG FCFHTAKTSF ENSBTAP00000021373/1-363 QDRREAGEPG RAEGEDGGDL PTTPTSVNYH FTRQCNYKCG FCFHTAKTSF ENSTTRP00000006885/1-307 RGRRKPRKPS REDKED-RDL PITPISVNYH FTRQCNYKCG FCFHTAKTSF bmy_05583T0/1-376 RDRRKPRETS REDEED-RDL PITPTSVNYH FTRQCNYKCG FCFHTAKTSF BACU016803/1-351 RGRRKPRETS REDEED-RDL PITPTSVNYH FTRQCNYKCG FCFHTAKTSF 101 150 ENSP00000371471/1-361 VLPLEEAKRG LLLLKEAGME KINFSGGEPF LQDRGEYLGK LVRFCKVELR ENSBTAP00000021373/1-363 VLPLEEAKKG LLMLKEAGME KINFSGGEPF LQDRGEYLGR LVKFCKQELQ ENSTTRP00000006885/1-307 VLPLAEAKRG LLLLKEAGME KINFSGGEPF LHDRGRYLGQ LVKFCKQELQ bmy_05583T0/1-376 VLPLAEAKRG LLLLKEAGME KINFSGGEPF LHDRGEYLGQ LVKFCKQELQ BACU016803/1-351 VLPLAEAKRG LLLLKEAGME KINFSGGEPF IHDRGEYLGQ LVKFCKRELQ 151 200 ENSP00000371471/1-361 LPSVSIVSNG SLIRERWFQN YGEYLDILAI SCDSFDEEVN VLIGRGQGKK ENSBTAP00000021373/1-363 LPSVSIVSNG SLIRERWFQK YGEYLDILAI SCDSFDEQVN VLIGRGQGKK ENSTTRP00000006885/1-307 LPSVSIVSNG SLIRESWFQK YGEYLDILAI SCDSFDEQVN VLIGRGQGNK bmy_05583T0/1-376 LPSVSIVSNG SLIRERWFQN YGEYLDILAI SCDSFDEQVN VLIGRGQGNK BACU016803/1-351 LPSVSVVSNG SLIRERWFQN YGEYLDILAI SCDSFDEQVN VLIGRGQGNK 201 250 ENSP00000371471/1-361 NHVENLQKLR RWCRDYRVAF KINSVINRFN VEEDMTEQIK ALNPVRWK-- ENSBTAP00000021373/1-363 NHVENLQKLR TWCKEYRVAF KINSVINRFN VDEDMKEQIT ALNPVRWK-- ENSTTRP00000006885/1-307 NHVENLQKLR TWCQDYRVAF KINSVINRYN VDEDMTEQIK ALNPIRWK-- bmy_05583T0/1-376 NHVENLQKLR TWCKNYRVAF KINSVINRFN VDEDMKEQIK ALNPIRWKVR BACU016803/1-351 NHVENLQKLR TWCKNYRVAF KINSVINRFN MDEDMKEQIK ALNPIRWK-- 251 300 ENSP00000371471/1-361 ---------- --VFQCLLIE GENCGEDALR EAERFVIGDE EFERFLERHK ENSBTAP00000021373/1-363 ---------- --VFQCLIIE GENSGEDALR EAERFVISDE EFEAFLDRHK ENSTTRP00000006885/1-307 ---------- --VFQCLIIE GDNSGQHALR EA-PFVISDE KFEAFLDRHK bmy_05583T0/1-376 AVSLLLLVIK RTVFQCLIIE GENSGEDALR EAEPFVISDE EFEAFLDRHK BACU016803/1-351 ---------- --VFQCLIIE GENSGEDALR EAGPFVISDE EFEAFLDRHK 301 350 ENSP00000371471/1-361 EVSCLVPESN QKMKDSYLIL DEYMRFLNCR KGRKDPSKSI LDVGVEEAIK ENSBTAP00000021373/1-363 DVSCLVPESN QKMRDSYLIL DEYMRFLNCR NGRKDPSKSI LDVGVEEAIK ENSTTRP00000006885/1-307 DVPCLVPESN QKMRDSYLIL DEY------- ---------- ---------- bmy_05583T0/1-376 DVPCLVPESN QKMRDSYLIL DEYMRFVNCR NGRKDPSTSI LDVGVEEAIK BACU016803/1-351 DVPCLVPESN QKMR------ -----FVNCR NGRKDPSTSI LDVGVEEAIK 351 400 ENSP00000371471/1-361 FSGFDEKMFL KRGGKYIWSK ADLKLDW ENSBTAP00000021373/1-363 FSGFDEKMFL KRGGKYVWSK ADLKLDW ENSTTRP00000006885/1-307 ---------- ---------- ------- bmy_05583T0/1-376 FSGFDEKMFL KRGGKYVWSK ADLKLDW BACU016803/1-351 FSGFDEKMFL KRGGKYVWSK ADLKLDW