KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:06 2014 Check: 00 .. Name: ENSTTRP00000011478/1-343 Len: 430 Check: 464 Weight: 1.00 Name: ENSP00000265372/1-300 Len: 430 Check: 2870 Weight: 1.00 Name: bmy_12851T0/1-266 Len: 430 Check: 1331 Weight: 1.00 Name: BACU001736/1-377 Len: 430 Check: 8476 Weight: 1.00 Name: ENSBTAP00000021381/1-360 Len: 430 Check: 5696 Weight: 1.00 // 1 50 ENSTTRP00000011478/1-343 ---------- ------MTME -IDSQQDGSI PDSVAESESA HMQMQTGQNS ENSP00000265372/1-300 MSKCARKKYI KTNPRQMTME TVESQHDGSI TASLTESKSA HVQTQTGQNS bmy_12851T0/1-266 ---------- ------MTME TIDSQQDGSI PDSVAESESA HMQTQTGQNS BACU001736/1-377 ---------- --------ME TIDSQQDGSI PDSVAESESA HMQTQTGQNS ENSBTAP00000021381/1-360 MSKCGRKKYM KTNLRQMTME TIDSQQDGSL PDSVAESESA HMQTQTGQNS 51 100 ENSTTRP00000011478/1-343 IPTLAQ---- ---------- --------VS VAGSGTGRGS PAVTLVQLPS ENSP00000265372/1-300 IPALAQ---- ---------- ---------- ---------- ---------- bmy_12851T0/1-266 IPTLAQLESC LSANSRKCTA LKCNSFLKVS VAGSGTGRGS PAVTLVQLPS BACU001736/1-377 IPTLAQ---- ---------- --------VS VAGSGTGRGS PAVTLVQLPS ENSBTAP00000021381/1-360 IPTLAQ---- ---------- --------VS VAGSSTGRGS PAVTLVQLPS 101 150 ENSTTRP00000011478/1-343 GQTVHVQGVF QTPQPSVIQS PQLQTVQVAT IAETDESAES ESVIDFHKRR ENSP00000265372/1-300 ---------- ---------- -------VAA IAETDESAES EGVIDSHKRR bmy_12851T0/1-266 GQTVHVQGVF QTPQPSVIQS PQVQTVQVAT IAETDESAES ERVIDFHKRR BACU001736/1-377 GQTVHVQGVF QTPQPSVIQS PQIQAIQVAT IAETDESAES ERVIDFHKRR ENSBTAP00000021381/1-360 GQTVHVQGVI QTPQPSVIQS PQIQTVQVAT IAETDESAES EGVIDSHKRR 151 200 ENSTTRP00000011478/1-343 EILSRRPSYR KILNELSSDV PGVPKIEEEK SEEEGTSPNI AAMAVPTSIY ENSP00000265372/1-300 EILSRRPSYR KILNELSSDV PGVPKIEEER SEEEGTPPSI ATMAVPTSIY bmy_12851T0/1-266 EILSRRPSYR KILNELSSDV PGVPKIEEEK SEEEGTSPNI AAMALPTSIY BACU001736/1-377 EILSRRPSYR KILNELSSDV PGVPKIEEEK SEEEGTSPNI AAMALPTSIY ENSBTAP00000021381/1-360 EILSRRPSYR KILNELSSDV PGVPKIEEEK SEEEGTPPNI AAMAVPTSIY 201 250 ENSTTRP00000011478/1-343 QTSTGQYXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000265372/1-300 QTSTGQYIAI AQGGTIQISN PGSDGVQGLQ ALTMTNSGAP PPGATIVQYA bmy_12851T0/1-266 QTSTGQYIAI AQGGTIQISN PGSDGVQGLQ ALTMTNSGAP PPGATIVQYA BACU001736/1-377 QTSTGQYIAI AQGGTIQISN PGSDGVQGLQ ALTMTNSGAP PPGATIVQYA ENSBTAP00000021381/1-360 QTSTGQYIAI AQGGTIQISN PGSDGVQGLQ ALTMTNSGAP PPGATIVQYA 251 300 ENSTTRP00000011478/1-343 XXXXXXXXXX XXXXXXXXXX XEETELAPSH ISATTGDMPT YQIRAPTTAL ENSP00000265372/1-300 AQSADGTQQF FVPGSQVVVQ ---------- --AATGDMPT YQIRAPTAAL bmy_12851T0/1-266 AQSADGTQQF FVPGSQVVVQ ---------- ---------- ---------- BACU001736/1-377 AQSADGTQQF FVPGSQVVVQ ---------- --ATTGDMPT YQIRAPTTAL ENSBTAP00000021381/1-360 AQSADGTQQF FVPGSQVVVQ DEETELAPSH MAAATGDMPT YQIRAPTTAL 301 350 ENSTTRP00000011478/1-343 PQGVVMAASP GSLHSPQQLA EEATRKRELR LMKNR----- ---------- ENSP00000265372/1-300 PQGVVMAASP GSLHSPQQLA EEATRKRELR LMKNR----- ---------- bmy_12851T0/1-266 ---VLM---- ---------- ---------- ---------- ---------- BACU001736/1-377 PQGVMMAASP GSLHSPQQLA EEATRKRELR LMKNREAARE CRRKKKEYVK ENSBTAP00000021381/1-360 PQGVVMAASP GSLHSPQQLA EEATRKRELR LMKNR----- ---------- 351 400 ENSTTRP00000011478/1-343 ---------- ---------- ---------- --EAARECRR KKKEYVKCLE ENSP00000265372/1-300 ---------- ---------- ---------- --EAAKECRR RKKEYVKCLE bmy_12851T0/1-266 ---------- ---------- ---------- ---------- ---------- BACU001736/1-377 CLENRVAVLE NQNKTLIEEL KALKDLYCRK VEEAAKECRR RKKEYVKCLE ENSBTAP00000021381/1-360 ---------- ---------- ---------- --EAAKECRR RKKEYVKCLE 401 450 ENSTTRP00000011478/1-343 NRVAVLENQN KTLIEELKAL KDLYCRKAE- ENSP00000265372/1-300 SRVAVLEVQN KKLIEELETL KDICSPKTDY bmy_12851T0/1-266 ---------- ---------- NPICLNEKS- BACU001736/1-377 SRVAVLEVQN KKLIEELETL KDICSPKTD- ENSBTAP00000021381/1-360 SRVAVLEVQN KKLIEELETL KDICSPKTD-