KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:14:08 2014 Check: 00 .. Name: ENSP00000358997/1-712 Len: 728 Check: 9801 Weight: 1.00 Name: ENSBTAP00000021407/1-673 Len: 728 Check: 7191 Weight: 1.00 Name: bmy_18746T0/1-591 Len: 728 Check: 8475 Weight: 1.00 Name: ENSTTRP00000004352/1-708 Len: 728 Check: 7371 Weight: 1.00 // 1 50 ENSP00000358997/1-712 MAGGPGPGEP AAPGAQHFLY EVPPWVMCRF YKVMDALEPA DWCQFAALIV ENSBTAP00000021407/1-673 ---------- ---------- ---------- ---------- -----AALIV bmy_18746T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004352/1-708 MAGGPGPGDP AVPGAQHFLY EVPPWVMCRF YKVMDALEPA DWCQFAALIV 51 100 ENSP00000358997/1-712 RDQTELRLCE RSGQRTASVL WPWINRNARV ADLVHILTHL QLLRARDIIT ENSBTAP00000021407/1-673 RDQTELRLCE RSGQRTASVL WPWINRNARV ADLVRILTHL QLLRARDIIT bmy_18746T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004352/1-708 RDQTELRLCE RSGQRTASVL WPWINRNARV ADLVRILTHL QLLRARDIIT 101 150 ENSP00000358997/1-712 AWHPPAPLPS PGTTAPRPSS IPAPAEAEAW SPRKLPSSAS TFLSPAFPGS ENSBTAP00000021407/1-673 AWHPPAPLLP PSTTSLTPSS ISAPSEAAVP GHRKLPSLAS TFLSPAFPGS bmy_18746T0/1-591 -------LLP PSATAPRPTS ISAPSEAAAP SPQKLHSSAS TLLSPAFPGS ENSTTRP00000004352/1-708 AWHPPAPLLP PSATAPRPNS ISAPSEAAAP SPQKLHSSAS TLLSPALPGS 151 200 ENSP00000358997/1-712 QTHSGPELGL VPSPASLWPP PPSPAPSSTK PGPESSVSLL QGARPFPFCW ENSBTAP00000021407/1-673 QTHSDPELCP GPSPAAHQPP LPSPAPSSTK PSPESPMSLL PGAPSSSFCW bmy_18746T0/1-591 QTHSDPELGP VPSPAALQPP LPSPAPSCIK RSPESPVSLL QGAHSSSFCW ENSTTRP00000004352/1-708 QTHSDPELGP VPSPAALQPP LPSAAPSCIK RSPESPASIL QGAHSS-FCW 201 250 ENSP00000358997/1-712 PLCEISRGTH NFSEELKIGE GGFGCVYRAV MRNTVYAVKR LKENADLEWT ENSBTAP00000021407/1-673 PLHEICQGTH DFSEELKIGE GGFGCVYRAV MRNTVYAVKR LKEEADLEWT bmy_18746T0/1-591 PLHEICQGTH DFSEELKIGE GGFGCVYRAV MRNTVYAVKR LKEEADLEWT ENSTTRP00000004352/1-708 PLHEICQGTH DFSEELKIGE GGFGCVYRAV MRNTVYAVKR LKE--DLEWT 251 300 ENSP00000358997/1-712 AVKQSFLTEV EQLSRFRHPN IVDFAGYCAQ NGFYCLVYGF LPNGSLEDRL ENSBTAP00000021407/1-673 TVKQSFQTEV QQLSRFRHPN IVDFAGYCAQ SGFYCLVYGF LPNGSLEDRL bmy_18746T0/1-591 TVKQSFRTEV EQLSRFRHPN IVDFAGYCAQ SGFYCLVYGF LPNGSLEDRL ENSTTRP00000004352/1-708 TVKQSFRTEV EQLSRFRHPN IVDFAGYCAQ SGFYCLVYGF LPNGSLEDRL 301 350 ENSP00000358997/1-712 HCQTQACPPL SWPQRLDILL GTARAIQFLH QDSPSLIHGD IKSSNVLLDE ENSBTAP00000021407/1-673 HVQTQAWPPL SWPQRLDILL GTARAIQFLH QDSPSLIHGD VKSSNVLLDE bmy_18746T0/1-591 HV-------- ---QRLDILL GTARAIQFLH QDSPSLIHGD VKSSNVLLDE ENSTTRP00000004352/1-708 HVQTQTWPPL SWPQRLDILL GTARAIQFLH QDSPSLIHGD VKSSNVLLDE 351 400 ENSP00000358997/1-712 RLTPKLGDFG LARFSRFAGS SPSQSSMVAR TQTVRGTLAY LPEEYIKTGR ENSBTAP00000021407/1-673 RLMPKLGDFG LARLSRFTGA NPGQSSSVAR TRTVRGTLAY LPEEYVKTGR bmy_18746T0/1-591 RLMPKLGDFG LARLSRFAGA NPSRSSAVAQ TRTVRGTLAY LPEEY----- ENSTTRP00000004352/1-708 RLMPKLGDFG LARLSRFAGA NPSRSSTVAQ TRTVRGTLAY LPEEYIKTGR 401 450 ENSP00000358997/1-712 LAVDTDTFSF GVVVLETLAG QRAVKTHGAR TKYLKDLVEE EAEEAGVALR ENSBTAP00000021407/1-673 LAVDTDTFSF GVVLLETLAG QRAVRMHGAQ PKYLKDLVEE EAEEAGVTLK bmy_18746T0/1-591 ---------- --VVLETLAG QRAVRMHGAQ SKYLKDLVEE EAEEAGLALK ENSTTRP00000004352/1-708 LAVETDTFSF GVVVLETLTG QRAVRMHGAQ TKYLKDLVEE EAEEAGLALK 451 500 ENSP00000358997/1-712 STQSTLQAGL AADAWAAPIA MQIYKKHLDP RPGPCPPELG LGLGQLACCC ENSBTAP00000021407/1-673 GTQTAVQGGP AADTWAALVA AQIYKKHLDP RPGPCPPQLG LALGQLACCC bmy_18746T0/1-591 STQTTLQAGL AADAWAAPIA TQIYKKHLDP KPGPCPPELG LALGQLACCC ENSTTRP00000004352/1-708 STQTTLQAGL AADAWAAPIA TQIYKKHLDP RPGPCPPELG LALGQLACCC 501 550 ENSP00000358997/1-712 LHRRAKRRPP MTQVYERLEK LQAVVAGVPG HSEAASCIPP SPQENSYVSS ENSBTAP00000021407/1-673 LHRRAKRRPP MTQVYQTLEE LQVVVAGPCL ELEAASRSPP SPQENSYVST bmy_18746T0/1-591 LHRRAKRRPP MTQVYQRLEK LQAAVAGPSL EPEAASRSPP SPQENSYVST ENSTTRP00000004352/1-708 LHRRAKRRPA MTQAYQKLET LQAAVAGPSL EPEATSRSPP SPQENSYVST 551 600 ENSP00000358997/1-712 TGRAHSGAAP WQPLAAPSGA SAQAAEQLQR GPNQPVESDE SLGGLSAALR ENSBTAP00000021407/1-673 SGSALSRASP WQPLAAPLGA QAQATDWPQK GANQPVESDE SVSDLSAALH bmy_18746T0/1-591 TGRALSGASP WQPLAAPSGA LAQATERLQK GANQPVESDE SMSGLSAALH ENSTTRP00000004352/1-708 TGSTLSGASP WQPLAAPSGA LAQAPERLQK GANQPVESDE SMSGLSAALH 601 650 ENSP00000358997/1-712 SWHLTPSCPL D--------- ------PAPL REAGCPQGDT AGESSWGSGP ENSBTAP00000021407/1-673 SWHLSPSCPA G--------P GAPSWVPAPF GQAACTQGGA ARESSCGSGP bmy_18746T0/1-591 SWHLTPSCPP GPARPGSPGP GAAVWAPAPL GQAGCTQGDA TRESSWGSGP ENSTTRP00000004352/1-708 SWHLTPSCPP G--------- ------PAPL GQAGCTQGDA TRQSSWGSSP 651 700 ENSP00000358997/1-712 GSRPTAVEGL ALGSSASSSS EPPQIIINPA RQKMVQKLAL YEDGALDSLQ ENSBTAP00000021407/1-673 GLQPTAVEGP LLGSSMSSR- -PPQIVINPA RRKMLQKLAL YEDGVLDSLQ bmy_18746T0/1-591 GLQPTAMEGP LLGSSTSSP- -PPQIVINPA RQKMLQKLAL YEDGVLDSLQ ENSTTRP00000004352/1-708 GLQPTAVEGP LLGGSTSPL- -PPQIVINPA RQKMLQKLAL YEDGVLDSLQ 701 750 ENSP00000358997/1-712 LLSSSSLPGL GLE-QDRQGP EESDEFQS ENSBTAP00000021407/1-673 LLSSSSLPDS GQDLQDRQGP EERDEFRS bmy_18746T0/1-591 LLSSGSLPDL GLGHQNRQGP EESDEFQS ENSTTRP00000004352/1-708 LLSSSSLPDL GLEHGNRQGP EESDEFQS