KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:09 2014 Check: 00 .. Name: ENSP00000243389/1-476 Len: 518 Check: 223 Weight: 1.00 Name: bmy_10539T0/1-337 Len: 518 Check: 7755 Weight: 1.00 Name: ENSBTAP00000021426/1-476 Len: 518 Check: 615 Weight: 1.00 Name: BACU013093/1-476 Len: 518 Check: 4013 Weight: 1.00 Name: ENSTTRP00000012989/1-475 Len: 518 Check: 1015 Weight: 1.00 // 1 50 ENSP00000243389/1-476 ---------- ---------- ---------- -MSTQRLRNE DYHDYSSTDV bmy_10539T0/1-337 MAASAPEPTP GLELKTPATG GLSAAPVPPV TMSTQRLRNE DYHDYSSTDV ENSBTAP00000021426/1-476 ---------- ---------- ---------- -MSTQRLRDE DYRDYSSTDA BACU013093/1-476 ---------- ---------- ---------- -MSTQRLRNE DYRDYSSTDV ENSTTRP00000012989/1-475 ---------- ---------- ---------- -MSTQRLRNE DYRDYSSTDV 51 100 ENSP00000243389/1-476 SPEESPSEGL NNLSSPGSYQ RFGQSNSTTW FQTLIHLLKG NIGTGLLGLP bmy_10539T0/1-337 SPEESPSEGL NNFSSSGSYQ RFGESNSTT- ---------- ---------- ENSBTAP00000021426/1-476 SPEESPSEGL NNFSSSGSYM RFGESNSTTW FQTLIHLLKS NIGTGLLGLP BACU013093/1-476 SPEESPSEGL NNFSSSGSYQ RFGESNGTTW FQTLIHLLKS NIGTGLLGLP ENSTTRP00000012989/1-475 SPEESPSEGL NSFSSPGSYQ RFGESNSTTW FQTLIHLLKG NIGTGLLGLP 101 150 ENSP00000243389/1-476 LAVKNAGIVM GPISLLIIGI VAVHCMGILV KCAHHFCRRL NKSFVDYGDT bmy_10539T0/1-337 ---------- ---------- ---------- ---------L NKPFVDYGDT ENSBTAP00000021426/1-476 LAVKNAGILM GPLSLLVIGL VAVHCMRILV KCAHHFCYRL NKPFVDYGDT BACU013093/1-476 LAVRNAGTLM GPLSLLVIGL VAVHCMGILV KCAHHFCHRL NKPFVDYGDT ENSTTRP00000012989/1-475 LAVKNAGILM GPLS-LVIGL VAVHCMGILV KCAHHFCRRL NKPFVDYGDT 151 200 ENSP00000243389/1-476 VMYGLESSPC SWLRNHAHWG RRVVDFFLIV TQLGFCCVYF VFLADNFKQV bmy_10539T0/1-337 VMYGLEASPI SWLRNNAHWG RHTVDFFLIV TQLGFCCVYF VFLADNFKQV ENSBTAP00000021426/1-476 VMYSLEASPI SWLRNHAHWG RRMVDFFLIV TQLGFCCIYF VFLADNFKQV BACU013093/1-476 VMYGLEASPI SWLRNNARWG RHTVDFFLIV TQLGFCCVYF VFLADNFKQV ENSTTRP00000012989/1-475 VMYGLEATPI SWLRNNAHWG RHTVDFFLIV TQLGFCCVYF VFLADNFKQV 201 250 ENSP00000243389/1-476 IEAANGTTNN CHNNETVILT PTMDSRLYML SFLPFLVLLV FIRNLRALSI bmy_10539T0/1-337 IEAANGTTTN CHNNETVIPT PTMDSRLYML AFLPFLVLLV FVRNLRALSI ENSBTAP00000021426/1-476 IEMANGTTNN CHNNETVILT PTMDSRLYML TFLPFMVLLV FIRNLRALSI BACU013093/1-476 IEAANGTTTN CHNNETVILT PTMDSRLYML AFLPFLVLLV FVRNLRALSI ENSTTRP00000012989/1-475 IEAANGTTTN CHNNETVILT PTMDSRLYML AFLPFLVLLV FVRNLRVLSI 251 300 ENSP00000243389/1-476 FSLLANITML VSLVMIYQFI VQ-------- ---RIPDPSH LPLVAPWKTY bmy_10539T0/1-337 FSLLANITMV VSLVMIYQFI VQLYFSIFYG SGNDIPDPSL LPLVASWRTY ENSBTAP00000021426/1-476 FSLLANITMA VSLVMIYQFT VQ-------- ---NIPDPSH LPLVASWKTY BACU013093/1-476 FSLLANITMV VSLVMIYQFI VQ-------- ---DIPDPSL LPLVASWQTY ENSTTRP00000012989/1-475 FSLLANITMV VSLVMIYQFI VQ-------- ---DIPDPKF LPLVASWQTY 301 350 ENSP00000243389/1-476 PLFFGTAIFS FEGIGMVLPL ENKMKDPRKF PLILYLGMVI VTILYISLGC bmy_10539T0/1-337 PLFFGTAVFA FEGIGMVLPL ENKMKDPGKF SLILYVGMAI VTVLYISLGS ENSBTAP00000021426/1-476 PLFFGTAIFA FEGIGMVLPL ENKMKDPKKF SLILYVGMAI VTALYVSLGI BACU013093/1-476 PLFFGTAVFA FEGIGMVLPL ENKMKDPRKF SFILYGGMAI VTVLYISLGS ENSTTRP00000012989/1-475 PLFFGTAIFA FEGIGMVLPL ENKMKDPRKF SLILYVGMAI ITVLYISLGC 351 400 ENSP00000243389/1-476 LGYLQFGANI QGSITLNLPN CWLYQSVKLL YSIGIFFTYA LQFYVPAEII bmy_10539T0/1-337 LGYLKFGTKI QGSITLNLPN C--------- ---------- ---------- ENSBTAP00000021426/1-476 LGYLHFGANI QGSITLNLPN CWLYQSVKLL YSVGIFFTYA LQFYVPAEII BACU013093/1-476 LGYLQFGAKI QGSITLNLPN CWLYQSVKLL YSIGIFFTYA LQFYVPAEII ENSTTRP00000012989/1-475 LGYLQFGANI QGSITLNLPN CWLYQSVKLL YSIGIFFTYA LQFYVPAEII 401 450 ENSP00000243389/1-476 IPFFVSRAPE HCELVVDLFV RTVLVCLTCI LAILIPRLDL VISLVGSVSS bmy_10539T0/1-337 ---------- ---------- -----CVT-- ----VYSLDF ILRLL----- ENSBTAP00000021426/1-476 IPFFVARGPE HCELVIDLSV RTVLVCLTCI LAILIPRLDL VISLVGSVSS BACU013093/1-476 IPFFVARVPE HWKLVVDLSM RTMLVCLTCV LAILIPRLDL VISLVGSVSS ENSTTRP00000012989/1-475 IPFFVARAPE HCELVIDLSV RTMLVCLTCV LAILVPRLDL VISLVGSVSS 451 500 ENSP00000243389/1-476 SALALIIPPL LEVTTFYSEG MSPLTIFKDA LISILGFVGF VVGTYEALYE bmy_10539T0/1-337 ---------- ---------- --------DT IVDTFGYS-- ---------- ENSBTAP00000021426/1-476 SALALIIPPL LEITTYYSEG MSPITIVKDA LISILGFVGF VVGTCLTLYE BACU013093/1-476 SALALIIPPL LEIATYHSEG MSPVTIVKDA LISLLGFVGF VVGTYVTLYE ENSTTRP00000012989/1-475 SALALIIPPL LEIATYYSEG MSPITIVKDA LISLLGFVGF VVGTCVTLYE 501 550 ENSP00000243389/1-476 LIQPSNAPIF INSTCAFI bmy_10539T0/1-337 ---------- VN------ ENSBTAP00000021426/1-476 LIQPSSAPIF INSTSAFV BACU013093/1-476 LIQPSSTPVF VNSTSAFV ENSTTRP00000012989/1-475 LIQPSSAPIF VNSTSAFV