KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:10 2014 Check: 00 .. Name: ENSP00000365494/1-615 Len: 765 Check: 9397 Weight: 1.00 Name: ENSBTAP00000021427/1-540 Len: 765 Check: 6546 Weight: 1.00 Name: ENSTTRP00000016086/1-614 Len: 765 Check: 8341 Weight: 1.00 Name: bmy_16648T0/1-715 Len: 765 Check: 4531 Weight: 1.00 Name: BACU009768/1-489 Len: 765 Check: 6969 Weight: 1.00 // 1 50 ENSP00000365494/1-615 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021427/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016086/1-614 ---------- ---------- ---------- ---------- ---------- bmy_16648T0/1-715 MHTKRQYKYC SAHSLQSGRH FQVPTPPLQS PQALECPVRD HVEPWGLWGP BACU009768/1-489 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000365494/1-615 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021427/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016086/1-614 ---------- ---------- ---------- ---------- ---------- bmy_16648T0/1-715 CFLRPSCSPG RSARKLSRTA FLGCAPLTSR QGAPWPGRDN RPRGGPRWAR BACU009768/1-489 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000365494/1-615 ---------- ---------- ---------- ---------- -MFARGSRRR ENSBTAP00000021427/1-540 ---------- ---------- ---------- ---------- -MFARGSRRR ENSTTRP00000016086/1-614 ---------- ---------- ---------- ---------- -MFARGSRRR bmy_16648T0/1-715 SSYAGVRFTE PRAPLPDARW PDGHKDSIRL TRPGLTLPGR AMFARGSRRR BACU009768/1-489 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000365494/1-615 RSGRAPPEAE DPDRGQPCNS CREQCPGFLL HGWRKICQHC KCPREEHAVH ENSBTAP00000021427/1-540 RSGRAPPEAE DPDRGQPCNS CREQCPGFLL HGWRKICQHC KCPREEHAVH ENSTTRP00000016086/1-614 RSGRAPQEAE DPDRGQPCNS CREQCPGFLL HGWRKICQHC KCPREEHAVH bmy_16648T0/1-715 RSGRAPQEAE DPDRGQPCNS CREQCPGFLL HGWRKICQHC KCPREEHAVH BACU009768/1-489 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000365494/1-615 AVPVDLERIM CRLISDFQRH SISDDDSGCA SEEYAWVPPG LKPEQVYQFF ENSBTAP00000021427/1-540 AVPVDLERIM CRLISDFQRH SISDDDSGCA SEEYAWVPPG LKPEQVYQFF ENSTTRP00000016086/1-614 AVPMDLERIM CRLISDFQRH SISDDDSGCA SEEYAWVPPG LKPEQVYQFF bmy_16648T0/1-715 AVPVDLERIM CRLISDFQRH SISDDDSGCA SEEYAWVPPG LKPEQ----- BACU009768/1-489 -----LERIM CRLISDFQRH SISDDDSGCA SEEYAWVPPG LKPEQVYQFF 251 300 ENSP00000365494/1-615 SCLPEDKVPY VNSPGEKYRI KQLLHQLPPH DSEAQYCTAL EEEEKKELRA ENSBTAP00000021427/1-540 SCLPEDKVPY VNSPGEKYRI KQLLHQLPPH DSEVQYCTAL EEEEKKELRA ENSTTRP00000016086/1-614 SCLPEDKVPY VNSPGEKYRI KQLLHQLPPH DSEAQYCTAL EEEEKKELRA bmy_16648T0/1-715 ---------- ---------- ---------- ---AQYCTAL EEEEKKELRA BACU009768/1-489 SCLPEDKVPY VNSPGEKYRI KQLLHQLPPH DSEAQYCTAL EEEEKKELRA 301 350 ENSP00000365494/1-615 FSQQRKRENL GRGIVRIFPV TITGAICEEC GKQIGGGDIA VFASRAGLGA ENSBTAP00000021427/1-540 FSQQRKRENL GRGTVRIFPV TITGAICEEC GKQIGGGDIA VFASRAGLGA ENSTTRP00000016086/1-614 FSQQRKRENL GRGTVRIFPV TITGAICEEC GKQIGGGDIA VFASRAGLGA bmy_16648T0/1-715 FSQQRKRENL GRGTVRIFPV TITGAICEEC GKQIGGGDIA VFASRAGLGA BACU009768/1-489 FSQQRKRENL GRGTVRIFPV TITGAICEEC GKQIGGGDIA VFASRAGLGA 351 400 ENSP00000365494/1-615 CWHPQCFVCT TCQELLVDLI YFYHVGKVYC GRHHAECLRP RCQACDEIIF ENSBTAP00000021427/1-540 CWHPQCFVCS TCRELLVDLI YFYHAGKVYC GRHHAERLRP RCQACDEIIF ENSTTRP00000016086/1-614 CWHPQCFVCS TCRELLVDLI YFYHAGKVYC GRHHAERLRP RCQACDEIIF bmy_16648T0/1-715 CWHPQCFVCS TCRELLVDLI YFYHAGKVYC GRHHAERLRP RCQACDEIIF BACU009768/1-489 CWHPQCFVCS TCRELLVDLI YFYHAGKVYC GRHHAERLRP RCQACDEIIF 401 450 ENSP00000365494/1-615 SPECTEAEGR HWHMDHFCCF ECEASLGGQR YVMRQSRPHC CACYEARHAE ENSBTAP00000021427/1-540 SPECTEAEGR HWHMDHFCCF ECEASLGGQR YVMRQSRPHC CACYEARHAE ENSTTRP00000016086/1-614 SPECTEAEGR HWHMGHFCCF ECEASLGGQR YVMRQSRPHC C-CYEARHAE bmy_16648T0/1-715 SPECTEAEGR HWHMGHFCCF ECEASLGGQR YVMRQSRPHC CACYEARHAE BACU009768/1-489 SPECTEAEGR HWHMGHFCCF ECEASLGGQR YVMRQSRPHC CACYEARHAE 451 500 ENSP00000365494/1-615 YCDGCGEHIG LDQGQMAYEG QHWHASDRCF CCSRCGRALL GRPFLPRRGL ENSBTAP00000021427/1-540 YCDGCGEHIG LDQGQMAYEG QHWHASERCF CCSRCGRALL GRPFLPRRGL ENSTTRP00000016086/1-614 YCDGLGKHIG LDQGQMAYEG QHWHASDRCF CCSRCGRALL GRPFLPRRGL bmy_16648T0/1-715 YCDGCGEHIG LDQGQMAYEG QHWHASDRCF CCSRCGRALL GRPFLPRRGL BACU009768/1-489 YCDGCGEHIG LDQGQMAYEG QHWHASDHCF CCSRCGRALL GRPFLPRRGL 501 550 ENSP00000365494/1-615 IFCSRACSLG SEPTAPGPSR RSWSAGPVTA PLAASTASFS AVKGASETTT ENSBTAP00000021427/1-540 IFCSRACSLG SEPMAPAHSR RSWSTSTVST PLTASTASFS AVEGASETTT ENSTTRP00000016086/1-614 IFCSRACSLG SELTAPGPGR RSWSAGTVST PLTASTASFS AVEGVSETST bmy_16648T0/1-715 IFCSRACSLG SEPTAPGPGR RSWSAGTVST PLTASTASFS AVEGASETST BACU009768/1-489 IFCSRACSLG SEPTAPGPGR RSWSAGTVST PLTASTASFS AVEGVSETST 551 600 ENSP00000365494/1-615 KGTSTELAPA TGPEEPSRFL RGAPHRHSMP ELGLRSVPEP PPESPGQPNL ENSBTAP00000021427/1-540 KGTNTEAAPA ADPEEPTHFL RGAPHRH--- ---------- ---------- ENSTTRP00000016086/1-614 KGTSTEPAPA AGSEEPARFL RGAPHRHSMP ELGLRSVPEP PSGPAGQPDP bmy_16648T0/1-715 KGTSTEPAPA AGPEEPARFL RGAPHRHSMP ELGLRSAPEP PSGPPGQPDP BACU009768/1-489 KGTSTEPAP- ---------- ---------- ---------- ---------- 601 650 ENSP00000365494/1-615 RPDDSAFGRQ STPRVSFRDP LVSEGGPRRT LSAPPAQRRR PRSPPPRAPS ENSBTAP00000021427/1-540 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016086/1-614 RPEDGAFGRQ STPRVSFRDP LVSEGGPRRS LSVPPAQRRR PRSPPPRGPI bmy_16648T0/1-715 RPEDGAFGRQ STPRVSFRDP LVSEGGPRRS LSVPPAQRRR PRSPPPRGPT BACU009768/1-489 ---------- ---------- -----GPRRS LSVPPAQRRR PRSPPPRGPT 651 700 ENSP00000365494/1-615 RRRHHHHNHH HHHNRHPSRR RHYQCDAGSG SDSESCSSSP SSSSSESSED ENSBTAP00000021427/1-540 HHDHHHH--H HHHRCHFGRR RHHQCDLGSG SDSGSCSSSP SSSSSESSEE ENSTTRP00000016086/1-614 HRRHPHHHHH HHHRRHSGRR RHHRCDLGSG SDSGSCSSSP SSPSSESSED bmy_16648T0/1-715 HRRHHH---H HHHRCHSGRR RHHQCDLGSG SDSGSCSSSP SSPSSESSED BACU009768/1-489 HRRH-----H HHHRCHSGRR RHHQCDLGSG SDSGSCSSSP SSPSSESSED 701 750 ENSP00000365494/1-615 DGFFLGERIP LPPHLCRPMP AQDTAMETFN SPSLSLPRDS RAGMPRQARD ENSBTAP00000021427/1-540 DGYFLGERIP LSPHLCRPVL AQDTAAETTN SPSPQLPGNS RPGISRQARD ENSTTRP00000016086/1-614 DGFFLGERIP LPPHLCRPMP AQDTATETPN SPSPQLPRNS RPGMPRQARD bmy_16648T0/1-715 DGFFLGERIP LPPHLCRPMP AQDTATETPN SPSPQLPRNS RPGMPRQARD BACU009768/1-489 DGFFLGERIP LPPHLCRPMP AQDTATETPN SPSPQLPRNS RPGMPRQARG 751 800 ENSP00000365494/1-615 KNCIVA---- ----- ENSBTAP00000021427/1-540 KNCIVA---- ----- ENSTTRP00000016086/1-614 KNCIVA---- ----- bmy_16648T0/1-715 KNCIVA---- ----- BACU009768/1-489 KNCIAHKGEE DWMDG