KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:10 2014 Check: 00 .. Name: ENSP00000263233/1-313 Len: 328 Check: 7219 Weight: 1.00 Name: ENSBTAP00000021428/1-313 Len: 328 Check: 6369 Weight: 1.00 Name: bmy_16649T0/1-328 Len: 328 Check: 2803 Weight: 1.00 Name: BACU009767/1-313 Len: 328 Check: 5073 Weight: 1.00 Name: ENSTTRP00000016087/1-313 Len: 328 Check: 5888 Weight: 1.00 // 1 50 ENSP00000263233/1-313 -----MLLLA DMDVVN---- ------QLVA GGQFRVVKEP LGFVKVLQWV ENSBTAP00000021428/1-313 -----MLLLA DMDVVN---- ------QLVA GGQFRVVKEP LGFVKVLQWV bmy_16649T0/1-328 GHCLVALSLT SLSIPNNPTP PHRFSPQLVA GGQFRVVKEP LGFVKVLQWV BACU009767/1-313 -----MLLLA DMDVVN---- ------QLVA GGQFRVVKEP LGFVKVLQWV ENSTTRP00000016087/1-313 -----MLLLA DMDVVN---- ------QLVA GGQFRVVKEP LGFVKVLQWV 51 100 ENSP00000263233/1-313 FAIFAFATCG SYSGELQLSV DCANKTESDL SIEVEFEYPF RLHQVYFDAP ENSBTAP00000021428/1-313 FAIFAFATCG SYSGEFQLSV DCANKTKSDL NIEVEFEYPF RLHEVYFEAP bmy_16649T0/1-328 FAIFAFATCG SYSGELQLSV DCANKTKSDL NIEVEFEYPF RLYQVYFEAP BACU009767/1-313 FAIFAFATCG SYSGELQLSV DCANKTKSDL NIEVEFEYPF RLYQVYFEAP ENSTTRP00000016087/1-313 FAIFAFATCG SYSGELQLSV DCANKTKSNL NIEVEFEYPF RLYQVYFEAP 101 150 ENSP00000263233/1-313 TCRGGTTKVF LVGDYSSSAE FFVTVAVFAF LYSMGALATY IFLQNKYREN ENSBTAP00000021428/1-313 TCQGDPKKIF LVGNYSSSAE FFVTVAVFAF LYSMGALATY IFLQNKYREN bmy_16649T0/1-328 TCQGDPKNIF LVGDYSSSAE FFVTVAVFAF LYSMGALATY IFLQNKYREN BACU009767/1-313 TCQGDPKNIF LVGDYSSSAE FFVTVAVFAF LYSMGALATY IFLQNKYREN ENSTTRP00000016087/1-313 TCQGDPKNIF LVGDYSSSAE FFVTVAVFAF LYSMGALATY IFLQNKYREN 151 200 ENSP00000263233/1-313 NKGPMLDFLA TAVFAFMWLV SSSAWAKGLS DVKMATDPEN IIKEMPVCRQ ENSBTAP00000021428/1-313 NKGPMLDFLA TAVFAFMWLV SSSAWAKGLS DVKMATDPEN IIKGMHVCHQ bmy_16649T0/1-328 NKGPMLDFLA TAVFAFMWLV SSSAWAKGLS DVKMATDPEN IIKGMPVCHQ BACU009767/1-313 NKGPMLDFLA TAVFAFMWLV SSSAWAKGLS DVKMATDPEN IIKGMPVCHQ ENSTTRP00000016087/1-313 NKGPMLDFLA TAVFAFMWLV SSSAWAKGLS DVKMATDPEN IIKGMPVCHQ 201 250 ENSP00000263233/1-313 TGNTCKELRD PVTSGLNTSV VFGFLNLVLW VGNLWFVFKE TGWAAPFLRA ENSBTAP00000021428/1-313 PGNTCKELRD PVTSGLNTSV VFGFLNLVLW VGNLWFVFKE TGWAAPFLRA bmy_16649T0/1-328 TGNTCKELRD PVTSGLNTSV VFGFLNLVLW VGNLWFVFKE TGWAAPFLRA BACU009767/1-313 TGNTCKELRD PVTSGLNTSV VFGFLNLVLW VGNLWFVFKE TGWAAPFLRA ENSTTRP00000016087/1-313 TGNTCKELRD PVTSGLNTSV VFGFLNLVLW VGNLWFVFKE TGWAAPFLRA 251 300 ENSP00000263233/1-313 PPGAPEKQPA PGDAYGDAGY GQGPGGYGPQ DSYGPQGGYQ PDYGQPAGSG ENSBTAP00000021428/1-313 PPGAPEKQPA PGDAYGEAGY GQGPGGYGPQ DSYGPQGGYQ PDYGQPASSG bmy_16649T0/1-328 PPGAPEKQPA PGDAYGEAGY GQGPGGYGPQ DSYGPQGGYQ PDYGQPAGGG BACU009767/1-313 PPGAPEKQPA PGDAYGEAGY GQGPGGDGPQ DSYGPQGGYQ PDYGQPAGGG ENSTTRP00000016087/1-313 PPGAPEKQPA PGDAYGEAGY GQGPGGYGPQ DSYGPQGGYQ PDYGQPAGGG 301 350 ENSP00000263233/1-313 GSGYGPQGDY GQQGYGPQGA PTSFSNQM ENSBTAP00000021428/1-313 GGGYGPQGDY GQQGYGPQGA PTSFSNQM bmy_16649T0/1-328 GGGYGPQGDY GQQGYGPQGA PTSFSNQM BACU009767/1-313 GGGYGPQGDY GQQGYGPQGA PTSFSNQM ENSTTRP00000016087/1-313 GGGYGPQGDY GQQGYGPQGA PTSFSNQM