KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:14:15 2014  Check: 00 ..

 Name: ENSBTAP00000021436/1-371  Len:    372  Check:  1303  Weight:  1.00
 Name: BACU004082/1-372          Len:    372  Check:  4669  Weight:  1.00
 Name: bmy_03819T0/1-213         Len:    372  Check:  1303  Weight:  1.00
 Name: ENSP00000423563/1-372     Len:    372  Check:  3931  Weight:  1.00
 Name: ENSTTRP00000005783/1-372  Len:    372  Check:  3931  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000021436/1-371  MSSRGGKKKS TKTSRSAKAG VIFPVGRMLR YIKKGHPKYR IGVGAPVYMA 
BACU004082/1-372          MSSRGGKKKS TKTSRSAKAG VIFPVGRMLR YIKKGHPKYR IGVGAPVYMA 
bmy_03819T0/1-213         ---------- ---------- ---------- ---------- ---------- 
ENSP00000423563/1-372     MSSRGGKKKS TKTSRSAKAG VIFPVGRMLR YIKKGHPKYR IGVGAPVYMA 
ENSTTRP00000005783/1-372  MSSRGGKKKS TKTSRSAKAG VIFPVGRMLR YIKKGHPKYR IGVGAPVYMA 


                          51                                                 100
ENSBTAP00000021436/1-371  AVLEYLTAEI LELAGNAARD NKKGRVTPRH ILLAVANDEE LNQLLKGVTI 
BACU004082/1-372          AVLEYLTAEI LELAGNAARD NKKGRVTPRH ILLAVANDEE LNQLLKGVTI 
bmy_03819T0/1-213         ---------- ---------- ---------- ---------- ---------- 
ENSP00000423563/1-372     AVLEYLTAEI LELAGNAARD NKKGRVTPRH ILLAVANDEE LNQLLKGVTI 
ENSTTRP00000005783/1-372  AVLEYLTAEI LELAGNAARD NKKGRVTPRH ILLAVANDEE LNQLLKGVTI 


                          101                                                150
ENSBTAP00000021436/1-371  ASGGVLPNIH PELLAKKRGS KGKLEAIITP PPAKKAKSPS QKKPVSKKTG 
BACU004082/1-372          ASGGVLPNIH PELLAKKRGS KGKLEAIITP PPAKKAKSPS QKKPVSKKAG 
bmy_03819T0/1-213         ---------- ---------- ---------- ---------- ---------- 
ENSP00000423563/1-372     ASGGVLPNIH PELLAKKRGS KGKLEAIITP PPAKKAKSPS QKKPVSKKAG 
ENSTTRP00000005783/1-372  ASGGVLPNIH PELLAKKRGS KGKLEAIITP PPAKKAKSPS QKKPVSKKAG 


                          151                                                200
ENSBTAP00000021436/1-371  GKKGARKS-K KQGEVSKAAS ADSTTEGTPA DGFTVLSTKS LFLGQKLNLI 
BACU004082/1-372          GKKGSRKSKK KQGEVSKAAS ADSTTEGTPA DGFTVLSTKS LFLGQKLNLI 
bmy_03819T0/1-213         ---------K KQGEVSKAAS ADSTTEGTPA DGFTVLSTKS LFLGQKLNLI 
ENSP00000423563/1-372     GKKGARKSKK KQGEVSKAAS ADSTTEGTPA DGFTVLSTKS LFLGQKLNLI 
ENSTTRP00000005783/1-372  GKKGARKSKK KQGEVSKAAS ADSTTEGTPA DGFTVLSTKS LFLGQKLNLI 


                          201                                                250
ENSBTAP00000021436/1-371  HSEISNLAGF EVEAIINPTN ADIDLKDDLG NTLEKKGGKE FVEAVLELRK 
BACU004082/1-372          HSEISNLAGF EVEAIINPTN ADIDLKDDLG NTLEKKGGKE FVEAVLELRK 
bmy_03819T0/1-213         HSEISNLAGF EVEAIINPTN ADIDLKDDLG NTLEKKGGKE FVEAVLELRK 
ENSP00000423563/1-372     HSEISNLAGF EVEAIINPTN ADIDLKDDLG NTLEKKGGKE FVEAVLELRK 
ENSTTRP00000005783/1-372  HSEISNLAGF EVEAIINPTN ADIDLKDDLG NTLEKKGGKE FVEAVLELRK 


                          251                                                300
ENSBTAP00000021436/1-371  KNGPLEVAGA AVSAGHGLPA KFVIHCNSPI WGADKCEELL EKTVKNCLAL 
BACU004082/1-372          KNGPLEVAGA AVSAGHGLPA KFVIHCNSPV WGADKCEELL EKTVKNCLAL 
bmy_03819T0/1-213         KNGPLEVAGA AVSAGHGLPA KFVIHCNSPV WGADKCEELL EKTVKNCLAL 
ENSP00000423563/1-372     KNGPLEVAGA AVSAGHGLPA KFVIHCNSPV WGADKCEELL EKTVKNCLAL 
ENSTTRP00000005783/1-372  KNGPLEVAGA AVSAGHGLPA KFVIHCNSPV WGADKCEELL EKTVKNCLAL 


                          301                                                350
ENSBTAP00000021436/1-371  ADDKKLKSIA FPSIGSGRNG FPKQTAAQLI LKAISSYFVS TMSSSIKTVY 
BACU004082/1-372          ADDKKLKSIA FPSIGSGRNG FPKQTAAQLI LKAISSYFVS TMSSSIKTVY 
bmy_03819T0/1-213         ADDKKLKSIA FPSIGSGRNG FPKQTAAQLI LKAISSYFVS TMSSSIKTVY 
ENSP00000423563/1-372     ADDKKLKSIA FPSIGSGRNG FPKQTAAQLI LKAISSYFVS TMSSSIKTVY 
ENSTTRP00000005783/1-372  ADDKKLKSIA FPSIGSGRNG FPKQTAAQLI LKAISSYFVS TMSSSIKTVY 


                          351                                                400
ENSBTAP00000021436/1-371  FVLFDSESIG IYVQEMAKLD AN 
BACU004082/1-372          FVLFDSESIG IYVQEMAKLD AN 
bmy_03819T0/1-213         FVLFDSESIG IYVQEMAKLD AN 
ENSP00000423563/1-372     FVLFDSESIG IYVQEMAKLD AN 
ENSTTRP00000005783/1-372  FVLFDSESIG IYVQEMAKLD AN