KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:14:25 2014  Check: 00 ..

 Name: ENSP00000418491/1-200     Len:    230  Check:  2111  Weight:  1.00
 Name: bmy_14815T0/1-138         Len:    230  Check:  266  Weight:  1.00
 Name: ENSBTAP00000021488/1-179  Len:    230  Check:  2705  Weight:  1.00
 Name: BACU016127/1-211          Len:    230  Check:  7076  Weight:  1.00
 Name: ENSTTRP00000007176/1-197  Len:    230  Check:  6203  Weight:  1.00

//


                          1                                                   50
ENSP00000418491/1-200     MRQGLLVLAL VLVLVLVLAA GSQ---VQEW YPRESHALNW NKFSGFWYIL 
bmy_14815T0/1-138         --LGS----P VLWVLWDLGW GPNPCGSPDP VPPAPSPQ-- --FSGFWYIL 
ENSBTAP00000021488/1-179  ----P----A LLALLLGLGG GSQ---AQEQ LPRESHNLNW HKFSGFWYVL 
BACU016127/1-211          --MGPGWLLP VLVLVLELPG GSL---AQKQ LPRESQNLNW VKFSGFWYIL 
ENSTTRP00000007176/1-197  --MGP-LLLP MLVLVLELPG GSL---AQKQ LPREPHNLNW DKFSGFWYIV 


                          51                                                 100
ENSP00000418491/1-200     ATATDAQGFL PARDKRKLGA SVVKVNKVGQ LRVLLAFRRL KGCQSQEVIL 
bmy_14815T0/1-138         AIASDTQGLL PSRDKRKLGA SVVKVHKMGQ LKVVLVFNLW KGSGGRGPPC 
ENSBTAP00000021488/1-179  AVASDAQGML PHGGQRKLGA SIVQVQEVGQ LKVVLALNRS RGCQTHSLIL 
BACU016127/1-211          AIASDTQGLL PSRDKRKLGA SVVKVHKMGQ LKVVLVFNRS QGCQAHSLIL 
ENSTTRP00000007176/1-197  AIASDTQGLL PARDKRKLGA SLVKVHKMDQ LRVVLVFNRS QGCKAHSLIL 


                          101                                                150
ENSP00000418491/1-200     RKDGKKPVFG NACAYAAGPR EGQEGVKGVK AFHVLSTDYS YGLVY-LRLG 
bmy_14815T0/1-138         RREQVTLCFS SR-------- ----PVKGVA GFHVLTTDYN DSVVY-LRLG 
ENSBTAP00000021488/1-179  RRDRKKPVFR NT-------- -----LRGVE GFRVMVPDYS ASVVY-LRLG 
BACU016127/1-211          RKDRKRAVFR NT-------- -----LKGVA GFHVLTTDYS DSVVY-LRLR 
ENSTTRP00000007176/1-197  RKDRKRAVFR NTCA-PLGPR ESKGRVKGVA GFHVLTSDYK XXXXXXXXXX 


                          151                                                200
ENSP00000418491/1-200     RATQNYKNLL LFHRQNVSSF QSLKEFMDAC DILGLSKAAV ILPKDASR-- 
bmy_14815T0/1-138         RAGQTTNTLL L--------- ---------- ---------- ---------- 
ENSBTAP00000021488/1-179  RAGRTTRTLL LFSRQPTCSF LSMKKFVNAC EALGLASRAA VLPKDASC-- 
BACU016127/1-211          RAGQTTNTLL LLSRQSTASF LSMRKFIDVC EALELTRSVT VLPKDGKVRP 
ENSTTRP00000007176/1-197  XXXXXXXXXX XXXRQSTASF LSMRKFIDVC EALELARSVT VLPKDASC-- 


                          201                                                250
ENSP00000418491/1-200     ---------- ------THTI LP-------- 
bmy_14815T0/1-138         ---------- ---------- ---------- 
ENSBTAP00000021488/1-179  ---------- ------AHTI LP-------- 
BACU016127/1-211          QALGLGQHRS RPHARPAGAL TPVGDREVER 
ENSTTRP00000007176/1-197  ---------- ------AHTI LP--------