KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:14:25 2014 Check: 00 .. Name: ENSTTRP00000011113/1-564 Len: 591 Check: 9006 Weight: 1.00 Name: ENSP00000263408/1-559 Len: 591 Check: 9684 Weight: 1.00 Name: bmy_06113T0/1-408 Len: 591 Check: 7853 Weight: 1.00 Name: ENSBTAP00000021495/1-548 Len: 591 Check: 4730 Weight: 1.00 // 1 50 ENSTTRP00000011113/1-564 MSTSRRFAFA ICILEISLLR AGSTPSYDSE LMESSDTSLP IDCKMSSWSS ENSP00000263408/1-559 MSACRSFAVA ICILEISILT AQYTTSYDPE LTESSGSASH IDCRMSPWSE bmy_06113T0/1-408 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021495/1-548 MSAGQRFAFA ICILEISLLR AGPTPSYDP- -AERQGTPLP IDCRMSSWSE 51 100 ENSTTRP00000011113/1-564 WSNCDPCLKQ MFRSRSIENF GQFNGQKCVD AVGDRRQCVP TETCNDPEDD ENSP00000263408/1-559 WSQCDPCLRQ MFRSRSIEVF GQFNGKRCTD AVGDRRQCVP TEPCEDAEDD bmy_06113T0/1-408 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021495/1-548 WSKCDPCLKQ MFRSRSIEIF GQFNGRKCVD AVGDRQQCVP TEACEDPEEG 101 150 ENSTTRP00000011113/1-564 CENDFRCHTG TCIKRRLLCN GDNDCGDFSD EDDCESDPRP PCRNKVVEES ENSP00000263408/1-559 CGNDFQCSTG RCIKMRLRCN GDNDCGDFSD EDDCESEPRP PCRDRVVEES bmy_06113T0/1-408 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021495/1-548 CGNDFQCGTG RCIKNRLLCN EDNDCGDYSD EDNCEQDPRP PCRNRVVEES 151 200 ENSTTRP00000011113/1-564 ELARTAGYGI NVLGMDPLTT PFNNEYYNGL CDRVWDGNSL TYYRRPWNVA ENSP00000263408/1-559 ELARTAGYGI NILGMDPLST PFDNEFYNGL CNRDRDGNTL TYYRRPWNVA bmy_06113T0/1-408 ---------- ----MDPLST PFNNEFYNGL CDRVWDGNTL TYYRRPWNVA ENSBTAP00000021495/1-548 ELARTAGFGI NILGMDPLST PFDNQYYNGL CDRVWDGNTL TYYRRPWNVA 201 250 ENSTTRP00000011113/1-564 SLAYE----- ---------- ---------T KADKNFRTEY YDEQMQVFRS ENSP00000263408/1-559 SLIYE----- ---------- ---------T KGEKNFRTEH YEEQIEAFKS bmy_06113T0/1-408 SLVYELYLCT NLFDTKSILT SFWSVSVQNT KADKNFRTEY YDGQMQIFRS ENSBTAP00000021495/1-548 SLTYD----- ---------- ---------T KADKNFRTEN HEESIQILRT 251 300 ENSTTRP00000011113/1-564 IIQEKKSSFN ADLSLKYTPR EAIGQLECTD SKPSCKKDF- -PRLSNAQGT ENSP00000263408/1-559 IIQEKTSNFN AAISLKFTPT ETNKAEQCCE ETASSIS--- ----LHGKGS bmy_06113T0/1-408 IIQEKKSNFN ADLSIKYTPV EAIGRFESKD SKPSDKKDFT NP--LNAQGT ENSBTAP00000021495/1-548 IIEEKKLNFN AGLSVKYTPV EAIEKNKCVD LEHSDKGSTS SPSKLAAEAK 301 350 ENSTTRP00000011113/1-564 FRFTYSKNES YKRLLLYSSK KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263408/1-559 FRFSYSKNET YQLFLSYSSK KEKMFLHVKG EIHLGRFVMR NRDVVLTTTF bmy_06113T0/1-408 FRFTYSKNET YKLLLSYSSK KEKIFMHVKG VIHLGRFVMR TRDVMLATTF ENSBTAP00000021495/1-548 FRFTYSKDDI YRLLSSYSAK QEKMFLHVKG KVHLGRFVMR SRDVMLQTTF 351 400 ENSTTRP00000011113/1-564 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263408/1-559 VDDIKALPTT YEKGEYFAFL ETYGTHYSSS GSLGGLYELI YVLDKASMKR bmy_06113T0/1-408 LDSIKALPAT YEKGEYFAFL ETYGTHYSSS GSLGGLYELI YVLDKASMNQ ENSBTAP00000021495/1-548 LDSINTLPTT YEKGEYFAFL ETYGTHYSSS GSLGGLYELI YVLDKKSMEQ 401 450 ENSTTRP00000011113/1-564 XXVELRDIQR CLGFNLGLSL N-AGIEIAGD INSDNCLKRS GDKFQNVTSE ENSP00000263408/1-559 KGVELKDIKR CLGYHLDVSL AFSEISVGAE FNKDDCVKRG EGRAVNITSE bmy_06113T0/1-408 KGVELRDIQR CLGFNLDLSL N-AGLEITGN INSDNCLKRG DGKIENIMSD ENSBTAP00000021495/1-548 KDIELRDVQR CLGFDLDLSL K-VGVEVTGN FDSKLCSKKG MGQTETNPEA 451 500 ENSTTRP00000011113/1-564 SLIDDVISFI RGGARKYATE LEEKLLRRGR MINVTDFVNW ASSLNDAPVL ENSP00000263408/1-559 NLIDDVVSLI RGGTRKYAFE LKEKLLRGT- VIDVTDFVNW ASSINDAPVL bmy_06113T0/1-408 DLIDDVISFI RGGTRKHATE LKEKLLKGAR MINVTDFVNW ASSLNDAPVL ENSBTAP00000021495/1-548 DLFDDVITFI RGGTRKYATE LKEKLLRGAR MINVTDFVNW AASLNHAPVL 501 550 ENSTTRP00000011113/1-564 INQKLSPIYD LIPVKVKDAH LKKQNLERAI EDYINEFSVR KCQPCQNGGN ENSP00000263408/1-559 ISQKLSPIYN LVPVKMKNAH LKKQNLERAI EDYINEFSVR KCHTCQNGGT bmy_06113T0/1-408 INQKLSPIYD LIPVKIKDAH LKKQNLERAI ADYINEFSVR KCQPCQNGGN ENSBTAP00000021495/1-548 ISQKLVPIYD LIPVKMKDAH LKKQNLERAI EDYINEFSVR KCQPCQNGGT 551 600 ENSTTRP00000011113/1-564 VILLDGQCLC SCPYKFKGVA CEIRKKIYEV LPAKKKKKKK K ENSP00000263408/1-559 VILMDGKCLC ACPFKFEGIA CEISKQKISE GLPALEFPNE K bmy_06113T0/1-408 VILLDGQCLC SCPNKFEGVA CEIKK----- ---------- - ENSBTAP00000021495/1-548 VVLLDGECVC SCPKEFKGVA CEIKK----- ---------- -