KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:25 2014 Check: 00 .. Name: ENSP00000226218/1-478 Len: 551 Check: 3628 Weight: 1.00 Name: ENSBTAP00000021497/1-476 Len: 551 Check: 2121 Weight: 1.00 Name: ENSTTRP00000009640/1-480 Len: 551 Check: 1490 Weight: 1.00 Name: bmy_00104T0/1-414 Len: 551 Check: 9337 Weight: 1.00 Name: BACU010509/1-507 Len: 551 Check: 9664 Weight: 1.00 // 1 50 ENSP00000226218/1-478 ---------- ---------- ---------- ---------- ----MAPLRP ENSBTAP00000021497/1-476 ---------- ---------- ---------- ---------- ----MTSLRP ENSTTRP00000009640/1-480 ---------- ---------- ---------- ---------- ----MASPRP bmy_00104T0/1-414 IIEQKKIIGI SEDHSLQVVG GLPEASEQRP QRTYFTRLEA GGPAMASPRP BACU010509/1-507 ---------- ---------- ---------- ---------- ----MASPRP 51 100 ENSP00000226218/1-478 LLILALLAWV ALADQESCKG RCTEGFNVDK KCQCDELCSY YQSCCTDYTA ENSBTAP00000021497/1-476 LLMLALLAWV VVADQESCKG RCTEGFNATR KCQCDELCSY YQSCCADFMA ENSTTRP00000009640/1-480 LLMLALLAWV VLADQESCKG RCTEGFNSDR KCQCDELCSY YQSCCSDYVV bmy_00104T0/1-414 LLMLALLAWV VLADQESCKG RCTEGFNADR KCQCDELCSY YQSCCSDYVV BACU010509/1-507 LLMLALLAWV VLADQESCKG RCTEGFNADR KCQCDELCSY YQSCCSDYVV 101 150 ENSP00000226218/1-478 ECKPQVTRGD VFTMPEDEYT VYDDGEE-KN NATVHEQVGG PSLTSDLQAQ ENSBTAP00000021497/1-476 ECKPQVTRGD VFHLPEDEYG FHDYSDAQTV NSNVEAQPES TTLAPVLQAQ ENSTTRP00000009640/1-480 ECKPQLTXXX XXXXXXXXXX XXXXXXX-XX XXXXXXXXXX XXXTFVRQAQ bmy_00104T0/1-414 ECKPQVTRGD VFTLPEDEYS FHDYHEETRS NTSVQAQPES STQTFVQQAQ BACU010509/1-507 ECKPQVTRGD VFTLPEDEYS FHDYREETRS NTSVQAQPEG STQTFVQWVQ 151 200 ENSP00000226218/1-478 SKGNPEQTPV LKPEEEAPAP EVGASKPEGI DSRPETLHPG RPQPPAEEEL ENSBTAP00000021497/1-476 TLETPVQAPV LNPEKEVPPS GRGDSEPGMG -----TSDLG TSESPAEEET ENSTTRP00000009640/1-480 PEETTEQTPV LNPEEEAPGP GRGNSEPEVG TVMPETGNLG ISESPAEEEQ bmy_00104T0/1-414 PEETPEQAPV LNPEEESPGP GRGNSEPEVG PLSPETGNLG ISESPAEEEQ BACU010509/1-507 PEETPGQTPV LNPEEETPGP GWGNSEPEVG TLSPETGNLG IAESPAEEEQ 201 250 ENSP00000226218/1-478 CSGKPFDAFT DLKNGSLFAF RGQYCYELDE KAVRPGYPKL IRDVWGIEGP ENSBTAP00000021497/1-476 CSGKPFDAFT DLKNGSLFAF RGLYCYELDE KAVRPGYPKL IRDVWGIEGP ENSTTRP00000009640/1-480 CSGKPFDAFT DLKNGSLFAF RGLYCYELDE KAVRPGYPKL IRDVWGIEGP bmy_00104T0/1-414 CSGKPFDAFT DLKNGSLFAF RGLYCYELDE KAVRPGYPKL IRDVWGIEGP BACU010509/1-507 CSGKPFDAFT DLKNGSLFAF RGLYCYELDE KAVRPGYPKL IRDVWGIEGP 251 300 ENSP00000226218/1-478 IDAAFTRINC QGKTYLFKGS QYWRFEDGVL DPDYPRNISD GFDGIPDNVD ENSBTAP00000021497/1-476 IDAAFTRVNC QGKTYLFKGS QYWRFQDGVL EPDFPRNISD GFGGIPDDVD ENSTTRP00000009640/1-480 IDAAFTRINC QGKTYLFKGS QYWRFEDGVL DPDFPRNISE GFRGIPDNVD bmy_00104T0/1-414 IDAAFTRINC QGKTYLFKGS QYWRFEDGVP DPDFPRNISE GFKGIPDNVD BACU010509/1-507 IDAAFTRINC QGKTYLFKGS QYWRFEDGVP DPDFPRNISE GFKGIPDNVD 301 350 ENSP00000226218/1-478 AALALPAHSY SGRERVYFFK ---------- ---------- ----GKQYWE ENSBTAP00000021497/1-476 AALALPAHNF NGRERVYFFK ---------- ---------- ----GNHYWE ENSTTRP00000009640/1-480 AALALPAHSY SGRERVYFFK ---------- ---------- ----GRQYWE bmy_00104T0/1-414 AALALPAHSY SGRERVYFFK GTQEELLTST ASGLSSLAHG HPSPGKQYWE BACU010509/1-507 AALALPAHSY SGRERVYFFK GTREELLTSA ASGLSRLAHG HPSPGKQYWE 351 400 ENSP00000226218/1-478 YQFQHQPSQE ECEGSSLSAV FEHFAMMQRD SWEDIFELLF WGRTSAGTRQ ENSBTAP00000021497/1-476 YVFQQQPSQE DCEGSSLPAA FKHFALMQRD SWVDIFRLLF WGGSYGGAGQ ENSTTRP00000009640/1-480 YEFQQQPSQE ECEGSSQSAV FKHFALLQRD SWEDIFRLLF WGSSSGGAGK bmy_00104T0/1-414 YEFQQQPSQE ECEGSSQSAV FEHFALMQRD SWEDIFRLLF WGSSSGTEG- BACU010509/1-507 YEFQQQPSRE ECEGSSQSAV FEHFALMQRD SWEDIFRLLF WGSSSGGAGK 401 450 ENSP00000226218/1-478 PQFISRDWHG VPGQVDAAMA GRIYISGMAP RPSLAKKQRF RHRNRKGYRS ENSBTAP00000021497/1-476 PQLISRNWFG LPGRLDAAMA GHIYVSGSAP SFPRAKMTKS ARRHRKRYRS ENSTTRP00000009640/1-480 PRFISRDWHG LPGQVDAAMA GHIYISGSAP RSSRTKMTKS ARRNRKRYRS bmy_00104T0/1-414 ---------- ---------- GQVFL----P RPE------- ---------- BACU010509/1-507 PRFISQDWLG LPGQVDAAMA GHIYISGSAP RPSRTKMTKS MRRNRKRYRS 451 500 ENSP00000226218/1-478 Q--RGHSRG- -RNQNSRRPS RATWLSLFSS EESNLGANNY DDYRMDWLVP ENSBTAP00000021497/1-476 LRSRGRGRG- -RNQNPYRRS RSAFLSWLSS EELGLGANNY DSFEMDWLVP ENSTTRP00000009640/1-480 RHGRGRGRR- -RSQNSYRQS RSTWLSWFSS EELGLGDYNY DNYEMDWLLP bmy_00104T0/1-414 --------G- ---------- ---------- ---------- ------W--- BACU010509/1-507 RRGRGRGRGR SRSQNPYRQS RSTWLSWFSS EEIGLGDYNY DNYKMDWLVP 501 550 ENSP00000226218/1-478 ATCEPIQSVF FFSGDKYYRV NLRTRRVDTV DPPYPRSIAQ YWLGCPAPGH ENSBTAP00000021497/1-476 ATCEPIQSVY FFSEDKYYRV NLRTRRVDAV IPPYPRSIAQ YWLGCPVPGQ ENSTTRP00000009640/1-480 ANCEPTQSVY FFSGDKYYRV NLRTRRVDAV IPPYPRSIAQ YWLGCPVPAH bmy_00104T0/1-414 ---------- ---------- ---------- DPPG------ ---------- BACU010509/1-507 ANCEPIQSVY FFSGDKYYRV NLRTRRVDAV IPPYPRSIAQ YWLGCPVPAH 551 600 ENSP00000226218/1-478 L ENSBTAP00000021497/1-476 A ENSTTRP00000009640/1-480 E bmy_00104T0/1-414 - BACU010509/1-507 E