KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:34 2014 Check: 00 .. Name: bmy_18562T0/1-195 Len: 215 Check: 6965 Weight: 1.00 Name: ENSP00000269878/1-187 Len: 215 Check: 6431 Weight: 1.00 Name: ENSBTAP00000021537/1-187 Len: 215 Check: 6423 Weight: 1.00 Name: BACU010319/1-187 Len: 215 Check: 7966 Weight: 1.00 Name: ENSTTRP00000013786/1-187 Len: 215 Check: 8102 Weight: 1.00 // 1 50 bmy_18562T0/1-195 MGNKQTVFTH EQLEAYQVGV MGRALGGFGS LGFLAQEMGT ASLRPGCAVS ENSP00000269878/1-187 MGNKQTVFTH EQLEAYQ--- ---------- ---------- -----DCTFF ENSBTAP00000021537/1-187 MGNKQTVFTH EQLEAYQ--- ---------- ---------- -----DCTFF BACU010319/1-187 MGNKQTVFTH EQLEAYQ--- ---------- ---------- -----DCTFF ENSTTRP00000013786/1-187 MGNKQTVFTH EQLEAYQ--- ---------- ---------- -----DCTFF 51 100 bmy_18562T0/1-195 KRSGAALLFY RYQDLAPQLV PLDYTSYPHV KVPYELIGSM PELKDNPFRQ ENSP00000269878/1-187 TRKEIMRLFY RYQDLAPQLV PLDYTTCPDV KVPYELIGSM PELKDNPFRQ ENSBTAP00000021537/1-187 TRKEIMRLFY RYQDLAPQLV PLDYTSCPDV KVPYELIGSM PELKDNPFRQ BACU010319/1-187 TRKEIMRLFY RYQDLAPQLV PLDYTSYPHV KVPYELIGSM PELKDNPFRQ ENSTTRP00000013786/1-187 TRKEIMRLFY RYQDLAPQLV PLDYTSYPDV KVPYELIGSM PELKDNPFRQ 101 150 bmy_18562T0/1-195 RIAQVFSEDG DGHMTLDNFL DMFSVMSEMA PRDLKAYYAF KIYG------ ENSP00000269878/1-187 RIAQVFSEDG DGHMTLDNFL DMFSVMSEMA PRDLKAYYAF KIYDFNNDDY ENSBTAP00000021537/1-187 RIAQVFSEDG DGHMTLDNFL DMFSVMSEMA PRDLKAYYAF KIYDFNNDDY BACU010319/1-187 RIAQVFSEDG DGHMTLDNFL DMFSVMSEMA PRDLKAYYAF KIYDFNNDDY ENSTTRP00000013786/1-187 RIAQVFSEDG DGHMTLDNFL DMFSVMSEMA PRDLKAYYAF KIYDFNNDDY 151 200 bmy_18562T0/1-195 --------TV TQLTRGELSA EEVSLVCEKV LDEADGDHDG RLSLEDFQNM ENSP00000269878/1-187 ICAWDLEQTV TKLTRGGLSA EEVSLVCEKV LDEADGDHDG RLSLEDFQNM ENSBTAP00000021537/1-187 ICAWDLEQTV TKLTRGELST EEVSLICEKV LDEADGDHDG RLSLEDFQNM BACU010319/1-187 ICVWDLEQTV TQLTRGELSA EEVSLVCEKV LDEADGDHDG RLSLEDFQNM ENSTTRP00000013786/1-187 ICVWDLEQTV TKLTRGELSA EEVSLVCEKV LDEADGDRDG RLSLEDFQNM 201 250 bmy_18562T0/1-195 ILRAPDFLR- ----- ENSP00000269878/1-187 ILRAPDFLST FHIRI ENSBTAP00000021537/1-187 ILRAPDFLST FHIRI BACU010319/1-187 ILRAPDFLST FHIRI ENSTTRP00000013786/1-187 ILRAPDFLST FHIRI