KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:36 2014 Check: 00 .. Name: ENSP00000236980/1-710 Len: 798 Check: 8533 Weight: 1.00 Name: ENSBTAP00000021553/1-688 Len: 798 Check: 1759 Weight: 1.00 Name: BACU014164/1-689 Len: 798 Check: 388 Weight: 1.00 Name: bmy_01672T0/1-698 Len: 798 Check: 5212 Weight: 1.00 Name: ENSTTRP00000009335/1-704 Len: 798 Check: 9619 Weight: 1.00 // 1 50 ENSP00000236980/1-710 MLTTLKPFGS VSVESKMNNK AGSFFWNLRQ FSTLVSTSRT MRLCCLGLCK ENSBTAP00000021553/1-688 ---------- ------MNNR AGSFLWNLRQ LSTLVPTGRT VRLYPLAFCR BACU014164/1-689 ---------- ------MKNR AGSFLWNLRQ FSTLVPTGRT VRLYPSGFCR bmy_01672T0/1-698 ---------- ------MKNR AGSFLWNLRQ FSTLVPTGRT VRLYPSGFCR ENSTTRP00000009335/1-704 ILTTLKPFES VSVARKMNNR AGSFLWNIRQ FSTLVLTGRT VRLYPSGFCR 51 100 ENSP00000236980/1-710 PKIVHSNWNI ----LNNFHN RMQSTDIIRY LFQDAFIFKS D-VGFQTKGI ENSBTAP00000021553/1-688 PNIAYSNWNR -RNLLNTFGN KMHSS--TRY LFQDALIFKS EGDGCQTKGI BACU014164/1-689 PKIVYSNWNL FQSYLSNFDN RMKSS--IRY LFQDALIFKS GGDGFQTKGI bmy_01672T0/1-698 PKIVYSNWNL FQSYLSNFDN RMQSS--MRY LFQDALIFKS GGDGFQTKGI ENSTTRP00000009335/1-704 PKIVYSSWNL -RKLLSNFDN RMQSS--IRY LFQDALIFKS GGDGFQTKGI 101 150 ENSP00000236980/1-710 STLTALRIER LLYAKRLFFD SKQSLVPVDK SDDELKKVNL NHEVSNEDVL ENSBTAP00000021553/1-688 STATVFTVDK LLCPRRLSFD SKHFLV---- SVSELKK-SF HQEASDEDVL BACU014164/1-689 STAAVLTVDR LLCPRRLSFN SEHFV----- SDNGLKK-NF HHEPSNEDVL bmy_01672T0/1-698 STATVLTVDR LLCPRRLSFN SEHFV----- SDNGLKK-NF HHEPSNEDVL ENSTTRP00000009335/1-704 STATVLTVDR LLCPRRLSFN SKHFV----- SDNGLKK-NF HHEASNEDVL 151 200 ENSP00000236980/1-710 TKETKPNRIS SRKLSEECNS LSDVLDAFSK APTFPSSNYF TAMWTIAKRL ENSBTAP00000021553/1-688 TKRRKPALIS STKLSQECNS LSDVLDIFSK APTFPSSNYF SAMWTIAKRM BACU014164/1-689 TKRTKPTPIN CRKLSQECNS LSDVLDIFSK APTFPSSNYF SAMWTIAKRM bmy_01672T0/1-698 TKRTKPTPIN CRKLSQECNS LSDVLDIFSK APTFPSSNYF SAMWTIAKRM ENSTTRP00000009335/1-704 TKRTKPTPIN CRKLSQECNS LSDVLDIFSK APTFPSSNYF SAMWTIAKRM 201 250 ENSP00000236980/1-710 SDDQKRFEKR LMFSHPAFNQ LCEHMMREAK IMQYKYLLFS LHAIVKLGIP ENSBTAP00000021553/1-688 SEDQKRFEKQ LMFNHPAFNQ LCEHVMREAK IMYFGDLLFS LHAIVKLGIP BACU014164/1-689 SDDQKRFEKQ LMFNHPAFSQ LCEQIMREAK IMHYDNLLFS LHAMVKLGIP bmy_01672T0/1-698 SDDQKRFEKQ LMFNHPAFSQ LCEQIMREAK IMHYDNLLFS LHAMVKLGIP ENSTTRP00000009335/1-704 SDDQKRFEKQ LMFNHPMFSQ LCEQIMREAK IMHYDNLLFS LHAMVKLGIP 251 300 ENSP00000236980/1-710 QNTILVQTLL RVTQERINEC DEICLSVLST VLEAMEPCKN VHVLRTGF-- ENSBTAP00000021553/1-688 QNTLLVQTLL RVVQERINEC DEKCLSVLST ILNTMEPCKN VDVLLAGL-- BACU014164/1-689 QNTLLVQTLL RVVQERINEC DETCLSVLST ILEAMEPCKN VDVLRAGL-- bmy_01672T0/1-698 QNTLLVQTLL RVVQERINEC DETCLSVLST ILEAMEPCKN VDVLRAGLRT ENSTTRP00000009335/1-704 QNTLLIQTLL RVVQERINEC DEKCLSVLST ILEAMEPCKN VDVLRAGL-- 301 350 ENSP00000236980/1-710 --------RI LVDQQVWKIE DVFTLQVVMK CIGKDAPIAL KRKLEMKALR ENSBTAP00000021553/1-688 --------RM LVDEQVCKIK HVFTLQTVMR SIGKDAPIGL KRKLEMKALK BACU014164/1-689 --------RM LVDQQVWKIE RVFTLQTVMK CIGKDAPIGL KRKLEMKALK bmy_01672T0/1-698 VVFIVFDDRM LVDQQVWKIE RVFTLQTVMK CIGKDAPIGL KRKLEMKALK ENSTTRP00000009335/1-704 --------RM LVDQQVWKIE RVFTLQAVMK CIGKDAPIGL KRKLEMKALK 351 400 ENSP00000236980/1-710 ELDRFSVLNS QHMFEVLAAM NHRSLILLDE CSKVVLDNIH GCPLRIMINI ENSBTAP00000021553/1-688 ELDQFSVLNC QHMFAVLAAM NHRSIILLNE CSKRVTSNIH GCPFKILINI BACU014164/1-689 ELDQFSVLNS QHMFAVLAAM NHRSIVLLNE CSKIVTSNIH GCPFKILISI bmy_01672T0/1-698 ELDQFSVLNS QHMFAVLAAM NHRSIILLNE CSKIVTSNIH GCPFKILISI ENSTTRP00000009335/1-704 ELDQFSVLNS QRMFAVLAAM NHRSIILLNE CSKIVTSNIH GCPFKILISI 401 450 ENSP00000236980/1-710 LQSCKDLQYH NLDLFKGLAD YVAATFDIWK FRKVLFILIL FENLGFRPVG ENSBTAP00000021553/1-688 LQSCRDLQYI NIDLFKGIAD YVATTFDIWK LKKVLFLLIL FENFGFRPVG BACU014164/1-689 LQSCRDLQYI NIDLFKGIAD YVATTFDMWK LKKVLFLLIS FENFGFRPVS bmy_01672T0/1-698 LQSCRDLQYV NIDLFKGIAD YVATTFDIWK LKKVLFLLIL FENFDFRPVS ENSTTRP00000009335/1-704 LQSCRDLQYF NIDLFKGIAD YVATTFDIWK LKKVLFLLIL FENVGFRPVS 451 500 ENSP00000236980/1-710 LMDLFMKRIV EDPESLNMKN ILSILHTYSS LNHVYKCQNK EQFVEVMASA ENSBTAP00000021553/1-688 LMDLFIKKAA DEPGFLNVKS LVGILNVYSS LNHFYKCQTH E-FLEVMASA BACU014164/1-689 LMDLFMKKAA DEPGFLNVKS LVSILHVYSS LNHFHKCWTH E-FLEVMASA bmy_01672T0/1-698 LMDLFMKKAA DEPGFLNVKS LVSILHVYSS LNHFHKCWTH E-FLEVMASA ENSTTRP00000009335/1-704 LMDLFMKKAA DEPGFLNVKS LVSILHVYSS LNHFHKCWTH DRFLEVMASA 501 550 ENSP00000236980/1-710 LTGYLHTISS ENLLDAVYSF CLMNYFPLAP FNQLLQKDII SELLTSDDM- ENSBTAP00000021553/1-688 LTGSLHHISS ENLLNAVCSF CWMNYFPLAL INQLLQKDII DDLLTSGDVE BACU014164/1-689 LTGSLHHISS ENLLNAVCSF CLMNHFPLAP INQLLQKDII HDLLTS---- bmy_01672T0/1-698 LTGSLHHISS ENLLNAVCSF CLMNHFPLAP INQLLQKDII HDLLTSGDVE ENSTTRP00000009335/1-704 LTGSLHHITS ENLLNAVCSF CLMNHFPLAP INQLLQKDII HDLLTSGDVE 551 600 ENSP00000236980/1-710 KNAYKLHTLD TCLKLDDTVY LRDIALSLPQ LPRELPSSHT NAKVAEVLSS ENSBTAP00000021553/1-688 RNVHRLHVVA TCLKLDDAPC HKDLDLVLPQ LPPM--TFCP QPKVAAVLSD BACU014164/1-689 ---------- ---------- ---------- ---------- ---------- bmy_01672T0/1-698 RNVHKLHVLA ACLKL-DAPC HKDTHLVLPQ LPPT--PLHP HAKVAEVLSS ENSTTRP00000009335/1-704 RNVHKLHVLA ACLKLDDVPC HKDTHLVLPQ LPP---SSHP HAKVAEVLSS 601 650 ENSP00000236980/1-710 LLGGEGHFSK DVHLPHNYHI DFEIRMDTNR NQVLPLSDVD T-TSATDIQR ENSBTAP00000021553/1-688 LL-GEGCFSQ SVQLPHNYFI DFEIRMDANR SQVLPFSDVD VVTS-TDIQR BACU014164/1-689 ---------- ---------- DFEIRMDANR SQALAFSDVD AVTSATNIQR bmy_01672T0/1-698 LL-GEGCFSK SVWLPHNYYI DFEIRMDANR SQVLPFSDVD VVTSATNIQR ENSTTRP00000009335/1-704 LL-GEGCFSK SVWLPHNYYI DFEIRMDANR SQVLPFSDVD VVTSATNIQR 651 700 ENSP00000236980/1-710 VAVLCVSRSA YCLGSSHPRG FLAMKMRHLN AMGFHVILVN NWEM------ ENSBTAP00000021553/1-688 VAVLCVPKSA YCLDSTHPKG YLAMKMRHLK IMGFHVILVN NWEV------ BACU014164/1-689 VAVLCVPRST YCLDSTHPRG FLAMKMRHLK VMGFHVILSI QSDLLKPRIP bmy_01672T0/1-698 VAVLCVPRST YCLDSTHPRG FLAMKMRHLK VMGFHVILVN NWEM------ ENSTTRP00000009335/1-704 VAVLCVPRST YCLDSTHPRG FLAMKMRHLK VMGFHVILVN NWEM------ 701 750 ENSP00000236980/1-710 ---------- -----DKLEM ED-------- ---------- ---------- ENSBTAP00000021553/1-688 ---------- -----EKLEM KD-------- ---------- ---------- BACU014164/1-689 SCHLPASNTL RTAHCKRNEM QTIHRGHVQY GSCLILHSYP SLRNPALCSV bmy_01672T0/1-698 ---------- -----EKLEM KD-------- ---------- ---------- ENSTTRP00000009335/1-704 ---------- -----EKLEM KD-------- ---------- ---------- 751 800 ENSP00000236980/1-710 --AVTFLK-- ---TKIYSVE ALPVAAVNVQ ---------- ---STQ-- ENSBTAP00000021553/1-688 --AVAFLK-- ---TKIYSPK ALSSADIHLQ ---------- ---STC-- BACU014164/1-689 LVSFLFLKYT MLFSALRSLP GPPSSQIHRH LLTHISTQNN FRSTGCLL bmy_01672T0/1-698 --AVTFLK-- ---TKIYSPE ALSTADIDLQ ---------- ---STC-- ENSTTRP00000009335/1-704 --AVTFLK-- ---SKIYSQE ALSTADINLQ ---------- ---STC--