KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:43 2014 Check: 00 .. Name: ENSP00000340684/1-527 Len: 867 Check: 6304 Weight: 1.00 Name: ENSBTAP00000021570/1-527 Len: 867 Check: 8035 Weight: 1.00 Name: ENSTTRP00000008578/1-359 Len: 867 Check: 1373 Weight: 1.00 Name: bmy_07110T0/1-378 Len: 867 Check: 7041 Weight: 1.00 Name: BACU008458/1-867 Len: 867 Check: 317 Weight: 1.00 // 1 50 ENSP00000340684/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021570/1-527 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 MWSIHSEWQT VSRQFSNALS NASAADAGCS RRHSAPSQLS HAPGLRTDTD 51 100 ENSP00000340684/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021570/1-527 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 TKVGLWGFGA RLQTDRIPMP ATRSTTSDGA VPASNSDTSN PRASIQGSVP 101 150 ENSP00000340684/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021570/1-527 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 PSVSPRLSRR QSAPPSVPDS TRVSVPGTST TKNSLRGSVQ ESLSPSMPSF 151 200 ENSP00000340684/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021570/1-527 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 LKIRAPPQPS NTPQVSLLGF TPPSVSGFPW GSVQGPPTPS SSPQLSVQES 201 250 ENSP00000340684/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021570/1-527 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 SQVSMPDSPR LSAPRSAPLL DSSRESVQGS APTSVLSTPE RSVRGSTPLS 251 300 ENSP00000340684/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021570/1-527 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 DSSRVSTQEA TQLSELGYPR TSVEKSAPPP GSPGVPVPGS APPSAPGSAR 301 350 ENSP00000340684/1-527 ---------- ---------- ---------- ---------- MENQEKASIA ENSBTAP00000021570/1-527 ---------- ---------- ---------- ---------- MESLQKTSDA ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 VSVEESAPPS GSPLESVEKS APPLASPTPL PTTRESLDQS MESQEKANRA 351 400 ENSP00000340684/1-527 GHMFDVVVIG GGISGLSAAK LLTEYGVSVL VLEARDRVGG RTYTIRNEHV ENSBTAP00000021570/1-527 GQMFDVVVIG GGISGLSAAK LLAEHEVNVL VLEARERVGG RTYTVRNEHV ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------- ---------- BACU008458/1-867 GHMFDVVVIG GGISGLSAAN LVAEHEVNVL VLEARDRVGG RTYTVRNQHV 401 450 ENSP00000340684/1-527 DYVDVGGAYV GPTQNRILRL SKELGIETYK VNVSERLVQY VKGKTYPFRG ENSBTAP00000021570/1-527 DYVDVGGAYV GPTQNRILRL SKQLGLETYK VNVNERLVHY VKGKTYPFRG ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 ---------- ---------- ---------- ---------M LQGRTYPFRG BACU008458/1-867 DYVDVGGAYV GPTQNRILRL SKELGLETYK VNVNERLVQY VKGRTYPFRG 451 500 ENSP00000340684/1-527 AFPPVWNPIA YLDYNNLWRT IDNMGKEIPT DAPWEAQHAD KWDKMTMKEL ENSBTAP00000021570/1-527 AFPPVWNPIA YLDYNNLWRT MDNMGKEIPA DAPWEAPHAV EWDKMTMKDL ENSTTRP00000008578/1-359 ---------- ---------- ---------- ---------- ---------- bmy_07110T0/1-378 AFPPVWNPIA YLDYNNLWRT MDNMGKEIPA DAPWEAPHAE EWDKMTMKDL BACU008458/1-867 AFPSVWNPIA YLDYNNLWRT MDNMGKEIPA DAPWEAPHAE EWDKMTMKDL 501 550 ENSP00000340684/1-527 IDKICWTKTA RRFAYLFVNI NVTSEPHEVS ALWFLWYVKQ CGGTTRIFSV ENSBTAP00000021570/1-527 IEKICWTKTA RQFASLFVNI NVTSEPHEVS ALWFLWYVKQ CGGTTRIFSI ENSTTRP00000008578/1-359 --------TA RQFASLFVNI NVTSEPHEVS ALWFLWYVKQ CGGTTRIFSI bmy_07110T0/1-378 IEKICWTKTA RQFASLFVNI NVTSEPHEVS ALWFLWYVKQ CGGTTRIFSI BACU008458/1-867 IEKICWTKTA RQFASLFVNI NVTSEPHEVS ALWFLWYVKQ CGGTTRIFSI 551 600 ENSP00000340684/1-527 TNGGQERKFV GGSGQVSERI MDLLGDQVKL NHPVTHVDQS SDNIIIETLN ENSBTAP00000021570/1-527 TNGGQERKFV GGSGQVSERI MQLLGDRVKL RSPVTYVDQS SENITVETLN ENSTTRP00000008578/1-359 TNGGQERKFV GGSGQVSERI MHLLGDRVKL RCPVTYVDQS GDNIMIETLN bmy_07110T0/1-378 TNGGQ----- ---------- ---------- ---------- ---------- BACU008458/1-867 TNGGQERKFV GGSGQVSERI MHLLGDRVKL RCPVTYVDQS GDNIMIETLN 601 650 ENSP00000340684/1-527 HEHYECKYVI NAIPPTLTAK IHFRPELPAE RNQLIQRLPM GAVIKCMMYY ENSBTAP00000021570/1-527 RELYECRYVI SAIPPTLTAK IHFRPELPSE RNQLIQRLPM GAVIKCMMYY ENSTTRP00000008578/1-359 HQLYECRYVI SAVPPTLTAK IHFRPELPSE RNQLIQRLPM GNIIKCMMYY bmy_07110T0/1-378 -----CRYVI SAVPPTLTAK IHFRPELPSE RNQLIQRLPM GAIIKCMMYY BACU008458/1-867 HQLYECRYVI SAVPPTLTAK IHFRPELPSE RNQLIQRLPM GAIIKCMMYY 651 700 ENSP00000340684/1-527 KEAFWKKKDY CGCMIIEDED APISITLDDT KPDGSLPAIM GFILARKADR ENSBTAP00000021570/1-527 KEAFWKKKDY CGCMIIEDEE APISITLDDT KPDGSLPAIM GFILARKADR ENSTTRP00000008578/1-359 KEAFWKTPDY CGCMIIEDEE APISITLDDT KPDGSLPAIM GFILARKADR bmy_07110T0/1-378 KEAFWKKKDY CGCMIIEDEE APISITLDDT KPDGSLPAIM GFILARKADR BACU008458/1-867 KEAFWKKKDY CGCMIIEDEE APVSITLDDT KPDGSLPAIM GFILARKADR 701 750 ENSP00000340684/1-527 LAKLHKEIRK KKICELYAKV LGSQEALHPV HYEEKNWCEE QYSGGCYTAY ENSBTAP00000021570/1-527 LAKVHKDIRK RKICELYAKV LGSQEALHPV HYEEKNWCQE QYSGGCYTAY ENSTTRP00000008578/1-359 LAKVHKELRK RKICELYAKV LGSQEALQPV HYEEKNWCEE QYSGGCYTAY bmy_07110T0/1-378 LAKVHKELRK RKICELYAKV LGSQEALQPV HYEEKNWCEE QYSGGCYTAY BACU008458/1-867 LAKVHKELRK RKICELYAKV LGSQEALQPV HYEEKNWCEE QYSGGCYTAY 751 800 ENSP00000340684/1-527 FPPGIMTQYG RVIRQPVGRI FFAGTETATK WSGYMEGAVE AGERAAREVL ENSBTAP00000021570/1-527 FPPGIMTQYG RVIRQPVGRI YFAGTETATQ WSGYMEGAVE AGERAAREVL ENSTTRP00000008578/1-359 FPPGIMTQYG RVIRQPVGRI YFAGTETATQ WSGYMEGAVQ AGERAAREVL bmy_07110T0/1-378 FPPGIMTQYG RVIRQPVGRI YFAGTETATQ WSGYMEGAVE AGERAAREVL BACU008458/1-867 FPPGIMTQYG RVIRQPVGRI YFAGTETATQ WSGYMEGAVE AGERAAREVL 801 850 ENSP00000340684/1-527 NGLGKVTEKD IWVQEPESKD VPAVEITHTF WERNLPSVSG LLKIIGFSTS ENSBTAP00000021570/1-527 NALGKLSAKD IWIQEPEAED VPAVEITPSF WERNLPSVSG LLKIVGFSTS ENSTTRP00000008578/1-359 NALGKVAKKD IWVQEPESED VPAVEITHTF WERNLPSVTG LLKIVGFSTS bmy_07110T0/1-378 NALGKVAKKD IWVQEPESED VPAVEITHTF WERNLPSVTG LLKIIGFSTS BACU008458/1-867 NALGKVAKND IWVQEPESED VPAVEITHTF WERNLPSVTG LLKIIGFSTS 851 900 ENSP00000340684/1-527 VTALGFVLYK YKLLPRS ENSBTAP00000021570/1-527 ITALWFVMYR FRLLSRS ENSTTRP00000008578/1-359 ITALWFAACK FRLLTRC bmy_07110T0/1-378 ITALWFAVCK FRLLTRC BACU008458/1-867 ITALWFAVCK FRLLTRC