KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:14:48 2014 Check: 00 .. Name: BACU016814/1-360 Len: 401 Check: 4769 Weight: 1.00 Name: ENSBTAP00000021600/1-280 Len: 401 Check: 6432 Weight: 1.00 Name: bmy_14883T0/1-253 Len: 401 Check: 7276 Weight: 1.00 Name: ENSTTRP00000001521/1-286 Len: 401 Check: 2041 Weight: 1.00 // 1 50 BACU016814/1-360 ---------- ---------- -------MFY AVRRGRKAGV FQTWDECRAQ ENSBTAP00000021600/1-280 MTRLLGVVHR VALAFV---- -GCRSLAMFY AVRRGRKAGV FLTWDECRAQ bmy_14883T0/1-253 MTRLLGVAHR VALAAVRCSG RSCRGLAMFY AVRRGRKAGV FQTWDECRA- ENSTTRP00000001521/1-286 MTRLLGLAHR VALAALRCGG RSCRGLAMFY AVRRGRKAGV FLTWDECRAQ 51 100 BACU016814/1-360 VDRFPAARFK KFATEEEAWA FVRSSANPDG SEGQKNKRVQ ESQVKANKRL ENSBTAP00000021600/1-280 VDRFPAARFK KFATEEEAWA FVRRSESPSD SEGQKTKHVE EPQVKASKRL bmy_14883T0/1-253 ---------- ---------- ---------- ---QKNKRVQ ESQVKADKRL ENSTTRP00000001521/1-286 VDRFPAARFK KFATEEEAWA FVRSSANPDG SEGQKNKHVQ ESQVKANKRL 101 150 BACU016814/1-360 HEPLDEGEGE TTEPCAKHVK QNAEPLPSVS KDTFSYM--- --------AP ENSBTAP00000021600/1-280 REPLDEDED- -AEACAKHVR QSAEPLPPVS KDTFSYMGDS VVVYTDGCCS bmy_14883T0/1-253 HEPLDEGEGE TTEPCAKHVK QNAEPLPSVS KDTFSYMGHS VIVYTDGCCS ENSTTRP00000001521/1-286 HEPLDEGEGE TTEPCAKHMK QSAEPLPSVS KDTFSYMGHS VVVYTDGCCS 151 200 BACU016814/1-360 LAGRRHPEFP SAL---PGAL PLIGGLRVAS CLSFSALLFT VLAACKAIEQ ENSBTAP00000021600/1-280 SNGRKRARAG IGVYWGPGH- PLNVGIRLPG RQTNQRA--E IHAACKAIEQ bmy_14883T0/1-253 SNGRRRARAG IGVYWGPGH- PLNVGIRLPG RQTNQRA--E IHAACKAIEQ ENSTTRP00000001521/1-286 SNGRRRARAG IGVYWGPGH- PLNVE-RLPG RQTNQRA--E IHXXXXXXXX 201 250 BACU016814/1-360 AKAQNINKLV LYTDSMFTIN GITNWVQGWK KSGWRTSTGK EVINKEDFME ENSBTAP00000021600/1-280 AKAQDITKLV LYTDSMFTIN GXXTWVKGWK QNGWRTSTGK EVTNKEDFAE bmy_14883T0/1-253 AKAQNINKLV LYTDSMFTIN GITNWLQGWK KSGWRTSTGK EVINKEDFME ENSTTRP00000001521/1-286 XXXQNINKLV LYTDSMFTIN GITNWVHSWK KSGWRTSTGK GVINKEDFMV 251 300 BACU016814/1-360 LDRLVQGMDV QWLDADKYEN DPELEKIRKE RNYSWMDVIT ICKDKLPNYE ENSBTAP00000021600/1-280 LERLARGMDI QWMH------ ---------- ---------- ---------- bmy_14883T0/1-253 LDRLVQGMDI QWMH------ ---------- ---------- ---------- ENSTTRP00000001521/1-286 LDRLVQGMDI QWMH------ ---------- ---------- ---------- 301 350 BACU016814/1-360 EKIKMFYEEH LHLDDEIRYI LDGSGYFDVR DKEDRWIRIF MEKGDMITLP ENSBTAP00000021600/1-280 ---------- ---------- VPGHSGFRGN EEADRLAR-- ---------- bmy_14883T0/1-253 ---------- ---------- VPGHSGFIGN EEADRLAR-- ---------- ENSTTRP00000001521/1-286 ---------- ---------- VPGHSGFIGN EEADRLAR-- ---------- 351 400 BACU016814/1-360 AGIYHRFTLD EKNYVKAMRL FVGDPVWTAY NRPADHFEAR GQYLEFLAQT ENSBTAP00000021600/1-280 ---------- ---------- -------EGA KQPAD----- ---------- bmy_14883T0/1-253 ---------- ---------- -------QGA KQPED----- ---------- ENSTTRP00000001521/1-286 ---------- ---------- -------QGA KQPED----- ---------- 401 450 BACU016814/1-360 A ENSBTAP00000021600/1-280 - bmy_14883T0/1-253 - ENSTTRP00000001521/1-286 -