KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:51 2014 Check: 00 .. Name: ENSTTRP00000006849/1-1125 Len: 1150 Check: 6249 Weight: 1.00 Name: BACU008566/1-1048 Len: 1150 Check: 8011 Weight: 1.00 Name: ENSBTAP00000021604/1-1150 Len: 1150 Check: 2995 Weight: 1.00 Name: ENSP00000346112/1-1150 Len: 1150 Check: 602 Weight: 1.00 Name: bmy_18105T0/1-1011 Len: 1150 Check: 7968 Weight: 1.00 // 1 50 ENSTTRP00000006849/1-1125 ---------M ASVRFMVTPT KIDDIPGLSD TSPDLSSRSS SRVRFSSRES BACU008566/1-1048 -------MDI ALSHYIC--- ---------- ---------- ---------- ENSBTAP00000021604/1-1150 MHPPETTTKM ASVRFMVTPT KIDDIPGLSD TSPDLSSRSS SRVRFSSRES ENSP00000346112/1-1150 MHPPETTTKM ASVRFMVTPT KIDDIPGLSD TSPDLSSRSS SRVRFSSRES bmy_18105T0/1-1011 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006849/1-1125 VPETSRSEPI SEMSGATSSL ATVALDPASD RTSNPQDVSE XXXXXXXXXX BACU008566/1-1048 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021604/1-1150 VPETSRSEPM SEMSGATTSL ATVALDQASD RTSNPQDVTE DPSQNSITGE ENSP00000346112/1-1150 VPETSRSEPM SEMSGATTSL ATVALDPPSD RTSHPQDVIE DLSQNSITGE bmy_18105T0/1-1011 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006849/1-1125 XXXXXXDGHK KARNAYLNNS NYEEGDEYFD KNLALFEEEM DTRPKVSSLL BACU008566/1-1048 -----DDGHK KARNAYLNNS NYEEGDEYFD KNLALFEEEM DTRPKVSSLL ENSBTAP00000021604/1-1150 HSQLLDDGHK KARNAYLNNS NYEEGDEYFD KNLALFEEEM DTRPKVSSLL ENSP00000346112/1-1150 HSQLLDDGHK KARNAYLNNS NYEEGDEYFD KNLALFEEEM DTRPKVSSLL bmy_18105T0/1-1011 ---------- ---------- ---------- ---------M DTRPKVSSLL 151 200 ENSTTRP00000006849/1-1125 SRLANYTNLT QGAKEHEEAE NITEGKKKPT KTPQMGTFMG VYLPCLQNIF BACU008566/1-1048 SRLANYTNLT QGAKEHEEAE NITEGKKKPT KTPQMGTFMG VYLPCLQNIF ENSBTAP00000021604/1-1150 SRLANYTNLT QGAKEHEEAE NITEGKKKPT KTPQMGTFMG VYLPCLQNIF ENSP00000346112/1-1150 NRMANYTNLT QGAKEHEEAE NITEGKKKPT KTPQMGTFMG VYLPCLQNIF bmy_18105T0/1-1011 SRLANYTNLT QGAKEHEEAE NITEGKKKPT KTPQMGTFMG VYLPCLQNIF 201 250 ENSTTRP00000006849/1-1125 GVILFLRLTW VVGTAGVLQA FAIVLICCCC TMLTAISMSA IATNGVVPAG BACU008566/1-1048 GVILFLRLTW VVGTAGVLQA FAIVLICCCC TMLTAISMSA IATNGVVPAG ENSBTAP00000021604/1-1150 GVILFLRLTW VVGTAGVLQA FAIVLICCCC TMLTAISMSA IATNGVVPAG ENSP00000346112/1-1150 GVILFLRLTW VVGTAGVLQA FAIVLICCCC TMLTAISMSA IATNGVVPAG bmy_18105T0/1-1011 GVILFLRLTW VVGTAGVLQA FAIVLICCCC TMLTAISMSA IATNGVVPAG 251 300 ENSTTRP00000006849/1-1125 GSYFMISRAL GPEFGGAVGL CFYLGTTFAA AMYILGAIEI FLVYIVPQAA BACU008566/1-1048 GSYFMISRAL GPEFGGAVGL CFYLGTTFAA AMYILGAIEI FLVYIVPRAA ENSBTAP00000021604/1-1150 GSYFMISRAL GPEFGGAVGL CFYLGTTFAA AMYILGAIEI FLVYIVPRAA ENSP00000346112/1-1150 GSYFMISRAL GPEFGGAVGL CFYLGTTFAA AMYILGAIEI FLVYIVPRAA bmy_18105T0/1-1011 GSYFMISRAL GPEFGGAVGL CFYLGTTFAA AMYILGAIEI FLVYIVPRAA 301 350 ENSTTRP00000006849/1-1125 IFHSDDALKE SAAMLNNMRV Y-TAFLVLMV LVVFIGVRYV NKF------- BACU008566/1-1048 IFHSDDALKE SAAMLNTMRV YGTAFLVLMV LVVFIGVRYV NKFASLFLAC ENSBTAP00000021604/1-1150 IFQSDDALKE SAAMLNNMRV YGTAFLVLMV LVVFIGVRYV NKFASLFLAC ENSP00000346112/1-1150 IFHSDDALKE SAAMLNNMRV YGTAFLVLMV LVVFIGVRYV NKFASLFLAC bmy_18105T0/1-1011 IFHSDDALKE SAAMLNNMRV YGTAFLVLMV LVVFIGVRYV NKFASLFLAC 351 400 ENSTTRP00000006849/1-1125 --VIVICIYA -----EISLP SHPVCMLGNR TLSSRHIDIC SKTKEINNMT BACU008566/1-1048 VIVSILAIYA GAIKSSFAPP HFPVCMLGNR TLSSRHIDIC SKTREINNMT ENSBTAP00000021604/1-1150 VIVSILAIYA GAIKSSFAPP HFPVCMLGNR TLSSRHIDVC SKTKEVNNMT ENSP00000346112/1-1150 VIVSILAIYA GAIKSSFAPP HFPVCMLGNR TLSSRHIDVC SKTKEINNMT bmy_18105T0/1-1011 VIVSILAIYA GAIKSSFAPP HFPVCMLGNR TLSSRHIDIC SKTKEINNMT 401 450 ENSTTRP00000006849/1-1125 VPSKLWGFFC NSSQFFNATC DEYFVHNNVT SIQGIPGLAS GVITENLWSN BACU008566/1-1048 VPSKLWGFFC NSSQFFNATC DEYFVHNNVT SIQGIPGLAS GVITENLWSN ENSBTAP00000021604/1-1150 VPSKLWGFFC NSSQFFNATC DEYFVHNNVT SIQGIPGLAS GVITENLWSN ENSP00000346112/1-1150 VPSKLWGFFC NSSQFFNATC DEYFVHNNVT SIQGIPGLAS GIITENLWSN bmy_18105T0/1-1011 VPSKLWGFFC NSSQFFNATC DEYFVHNNVT SVQGIPGLAS GVITENLWSN 451 500 ENSTTRP00000006849/1-1125 YIPKGEIIEK PSAKSSDVLG SLNHEYVLVD ITTSFTLLVG IFFPSVTGIM BACU008566/1-1048 YIPKGEIIEK PSAKSSDVLG SLNHEYVLVD ITTSFTLLVG IFFPSVTGIM ENSBTAP00000021604/1-1150 YLPKGEIIEK PSAKSSEVLG SLNHEYVLVD ITTSFTLLVG IFFPSVTGIM ENSP00000346112/1-1150 YLPKGEIIEK PSAKSSDVLG SLNHEYVLVD ITTSFTLLVG IFFPSVTGIM bmy_18105T0/1-1011 YIPKGEIIEK PSAKSSDVLG SLNHEYVLVD ITTSFTLLVG IFFPSVTGIM 501 550 ENSTTRP00000006849/1-1125 AGSNRSGDLK DAQKSIPIGT ILAILTTSFV YLSNVVLFGA CIEGVVLRDK BACU008566/1-1048 AGSNRSGDLK DAQKSIPIGT ILAILTTSFV YLSNVVLFGA CIEGVVLRDK ENSBTAP00000021604/1-1150 AGSNRSGDLK DAQKSIPIGT ILAILTTSFV YLSNVVLFGA CIEGVVLRDK ENSP00000346112/1-1150 AGSNRSGDLK DAQKSIPIGT ILAILTTSFV YLSNVVLFGA CIEGVVLRDK bmy_18105T0/1-1011 AGSNRSGDLK DAQKSIPIGT ILAILTTSFV YLSNVVLFGA CIEGVVLRDK 551 600 ENSTTRP00000006849/1-1125 FGDAVKGNLV VGTLSWPSPW VIVIGSFFST CGAGLQSLTG APRLLQAIAK BACU008566/1-1048 FGDAVKGNLV VGTLSWPSPW VIVIGSFFST CGAGLQSLTG APRLLQAIAK ENSBTAP00000021604/1-1150 FGDAVKGNLV VGTLSWPSPW VIVIGSFFST CGAGLQSLTG APRLLQAIAK ENSP00000346112/1-1150 FGDAVKGNLV VGTLSWPSPW VIVIGSFFST CGAGLQSLTG APRLLQAIAK bmy_18105T0/1-1011 FGDAVKGNLV VGTLSWPSPW VIVIGSFFST CGAGLQSLTG APRLLQAIAK 601 650 ENSTTRP00000006849/1-1125 DNIIPFLRVF GHSKANGEPT WALLLTAVIA ELGILIASLD LVAPILSMFF BACU008566/1-1048 DNIIPFLRVF GHSKANGEPT WALLLTAVIA ELGILIASLD LVAPILSMFF ENSBTAP00000021604/1-1150 DNIIPFLRVF GHSKANGEPT WALLLTAAIA ELGILIASLD LVAPILSMFF ENSP00000346112/1-1150 DNIIPFLRVF GHSKANGEPT WALLLTAAIA ELGILIASLD LVAPILSMFF bmy_18105T0/1-1011 DNIIPFLRVF GHSKANGEPT WALLLTAVIA ELGILIASLD LVAPILSMFF 651 700 ENSTTRP00000006849/1-1125 LMCYLFVNLA CALQTLLRTP NWRPRFRYYH WALSFMGMSI CLALMFISSW BACU008566/1-1048 LMCYLFVNLA CALQTLLRTP NWRPRFRYYH WALSFMGMSI CLALMFISSW ENSBTAP00000021604/1-1150 LMCYLFVNLA CALQTLLRTP NWRPRFRYYH WALSFMGMSI CLALMFISSW ENSP00000346112/1-1150 LMCYLFVNLA CALQTLLRTP NWRPRFRYYH WALSFMGMSI CLALMFISSW bmy_18105T0/1-1011 LMCYLFVNLA CALQTLLRTP NWRPRFRYYH WALSFMGMSI CLALMFISSW 701 750 ENSTTRP00000006849/1-1125 YYAIVAMVIA GMIYKYIEYQ GAEKEWGDGI RRLSLSAARF -LLRXXXXXX BACU008566/1-1048 YYAIVAMVIA GMIYKYIEYQ GAEKEWGDGI RGLSLSAARF ALLRLEEGPP ENSBTAP00000021604/1-1150 YYAIVAMVIA GMIYKYIEYQ GAEKEWGDGI RGLSLSAARF ALLRLEEGPP ENSP00000346112/1-1150 YYAIVAMVIA GMIYKYIEYQ GAEKEWGDGI RGLSLSAARF ALLRLEEGPP bmy_18105T0/1-1011 YYAIVAMVIA GMIYKYIEYQ GAEKEWGDGI RGLSLSAARF ALLRLEEGPP 751 800 ENSTTRP00000006849/1-1125 XXXXXXPQLL VLLKLDEDLH VKHPRLLTFA SQLKAGKGLT IVGSVIVGNF BACU008566/1-1048 HTKNWRPQLL VLLKLDEDLH VKHPRLLTFA SQLKAGKGLT IVGSVIVGNF ENSBTAP00000021604/1-1150 HTKNWRPQLL VLLKLDEDLH VKHPRLLTFA SQLKAGKGLT IVGSVIVGNF ENSP00000346112/1-1150 HTKNWRPQLL VLLKLDEDLH VKHPRLLTFA SQLKAGKGLT IVGSVIVGNF bmy_18105T0/1-1011 HTKNWRPQLL VLLKLDEDLH VKHPRLLTFA SQLKAGKGLT IVGSVIVGNF 801 850 ENSTTRP00000006849/1-1125 LENYGEALAA EQTIKHLMEA EKVKGFSQLV VAAKLREGIS HLIQSCGLGG BACU008566/1-1048 LENYGEALAA EQTIKHLMEA EKVKGFSQLV VAAKLREGIS HLIQSCGLGG ENSBTAP00000021604/1-1150 LENYGEALAA EQTIKHLMEA EKVKGFSQLV VAAKLREGIS HLIQSCGLGG ENSP00000346112/1-1150 LENYGEALAA EQTIKHLMEA EKVKGFCQLV VAAKLREGIS HLIQSCGLGG bmy_18105T0/1-1011 LENYGEALAA EQTIKHLMEA EKVKGFSQLV VAAKLREGIS HLIQSCGLGG 851 900 ENSTTRP00000006849/1-1125 MKHNTVVMGW PNGWRQSEDA RAWKTFIGTV RVTTAAHLAL LVAKNISFFP BACU008566/1-1048 MKHNTVVMGW PNGWRQSEDA RAWKTFIGTV RVTTAAHLAL LVAKNISFFP ENSBTAP00000021604/1-1150 MKHNTVVMGW PNGWRQSEDA RAWKTFIGTV RVTTAAHLAL LVAKNISFFP ENSP00000346112/1-1150 MKHNTVVMGW PNGWRQSEDA RAWKTFIGTV RVTTAAHLAL LVAKNISFFP bmy_18105T0/1-1011 MKHNTVVMGW PNGWRQSEDA RAWKTFIGTV RVTTAAHLAL LVAKNISFFP 901 950 ENSTTRP00000006849/1-1125 SNVEQFSEGN IDVWWIVHDG GMLMLLPFLL KQHKVWRKCS IRIFTVAQLE BACU008566/1-1048 SNVEQFSEGN IDVWWIVHDG GMLMLLPFLL KQHKVWRKCS IRIFTVAQLE ENSBTAP00000021604/1-1150 SNVEQFSEGN IDVWWIVHDG GMLMLLPFLL KQHKVWRKCS IRIFTVAQLE ENSP00000346112/1-1150 SNVEQFSEGN IDVWWIVHDG GMLMLLPFLL KQHKVWRKCS IRIFTVAQLE bmy_18105T0/1-1011 SNVEQFSEGN IDVWWIVHDG GMLMLLPFLL KQHKVWRKCS IRIFTVAQLE 951 1000 ENSTTRP00000006849/1-1125 DNSIQMKKDL ATFLYHLRIE AEVEVVEMHD SDISAYTYER TLMMEQRSQM BACU008566/1-1048 DNSIQMKKDL ATFLYHLRIE AEVEVVEMHD SDISAYTYER TLMMEQRSQM ENSBTAP00000021604/1-1150 DNSIQMKKDL ATFLYHLRIE AEVEVVEMHD SDISAYTYER TLMMEQRSQM ENSP00000346112/1-1150 DNSIQMKKDL ATFLYHLRIE AEVEVVEMHD SDISAYTYER TLMMEQRSQM bmy_18105T0/1-1011 DNSIQMKKDL ATFLYHLRIE AEVEVVEMHD SDISAYTYER TLMMEQRSQM 1001 1050 ENSTTRP00000006849/1-1125 LRHMRLSKTE RDREAQLVKD RNSMLRLTSI GSDEDEETET YQEKVHMTWT BACU008566/1-1048 LRHMRLSKTE RDREAQLVKD RNSMLRLTSI GSDEDEETET YQEKVHMTWT ENSBTAP00000021604/1-1150 LRHMRLSKTE RDREAQLVKD RNSMLRLTSI GSDEDDETET YQEKVHMTWT ENSP00000346112/1-1150 LRHMRLSKTE RDREAQLVKD RNSMLRLTSI GSDEDEETET YQEKVHMTWT bmy_18105T0/1-1011 LRHMRLSKTE RDREAQLVKD RNSMLRLTSI GSDEDEETET YQEKVHMTWT 1051 1100 ENSTTRP00000006849/1-1125 KDKYMASRGQ KAKSMEGFQD LLNMRPDQSN VRRMHTAVKL NEVIVNKSHE BACU008566/1-1048 KDKYMASRGQ KAKSMEGFQD LLNMRPDQSN VRRMHTAVKL NEVIVNKSHE ENSBTAP00000021604/1-1150 KDKYMASRGQ KAKSMEGFQD LLNMRPDQSN VRRMHTAVKL NEVIVNKSHE ENSP00000346112/1-1150 KDKYMASRGQ KAKSMEGFQD LLNMRPDQSN VRRMHTAVKL NEVIVNKSHE bmy_18105T0/1-1011 KDKYMASRGQ KAKSMEGFQD LLNMRPDQSN VRRMHTAVKL NEVIVNKSHE 1101 1150 ENSTTRP00000006849/1-1125 AKLVLLNMPG PPRNPEGDEN YMEFLEVLTE GLERVLLVRG GGSEVITIYS BACU008566/1-1048 AKLVLLNMPG PPRNPEGDEN CI-LSESKTS SRENLSLCFR WDTK------ ENSBTAP00000021604/1-1150 AKLVLLNMPG PPRNPEGDEN YMEFLEVLTE GLERVLLVRG GGSEVITIYS ENSP00000346112/1-1150 AKLVLLNMPG PPRNPEGDEN YMEFLEVLTE GLERVLLVRG GGSEVITIYS bmy_18105T0/1-1011 AKLVLLNMPG PPRNPEGDEN YMEFLEVLTE GLERVLLVRG GGSEVITIYS