KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:52 2014 Check: 00 .. Name: ENSP00000319705/1-320 Len: 369 Check: 801 Weight: 1.00 Name: ENSTTRP00000012872/1-321 Len: 369 Check: 6198 Weight: 1.00 Name: ENSBTAP00000021606/1-286 Len: 369 Check: 3593 Weight: 1.00 Name: bmy_12680T0/1-340 Len: 369 Check: 8762 Weight: 1.00 Name: BACU002849/1-347 Len: 369 Check: 4084 Weight: 1.00 // 1 50 ENSP00000319705/1-320 MTLWNGVLPF YPQPRHAAGF SVPLLIVILV FLALAASFLL ILPGIRGHSR ENSTTRP00000012872/1-321 MTLWNGVLPF YPQPRHAAGI SVPLLIVILV FLALAASFLL ILPGIRGHSR ENSBTAP00000021606/1-286 MTLWNGVLPF YPQPRHAAGL SVPLLIVILV FLVLAASFLL ILPGIRGHSR bmy_12680T0/1-340 MTLWNGVLPF YPQPRHAAGI SVPLLIVILV FLALAASFLL ILPGIRGHSR BACU002849/1-347 MTLWNGVLPF YPQPRHAAGV SVPLLIVILV FLALAASFLL ILPGIRGHSR 51 100 ENSP00000319705/1-320 WFWLVRVLLS LFIGAEIVAV HFSAEWFVGT VNTNTSYKAF SAARVTARVR ENSTTRP00000012872/1-321 WFWLVRVLLS LFIGAEIVAV CFSTEWSVGR VSTNTSYKAF SAARVRAHVG ENSBTAP00000021606/1-286 WFWLVRVLLS LFIGAEIVAA HFSAEWSVGS VSTKTSYKAF SVERVRAHVG bmy_12680T0/1-340 WFWLVRVLLS LFIGAEIVAV HFSAEWSVGR VSTNTSYKAF SAARVRAHVG BACU002849/1-347 WFWLVRVLLS LFIGAEIVAV HFSAEWSVGR VSTNTSYKAF SAARVRAHVG 101 150 ENSP00000319705/1-320 LLVGLEGINI TLT------- ---------- ---------- GTPVHQLNET ENSTTRP00000012872/1-321 LQVGLAGVNV TLT------- ---------- ---------- XXXXXXXXXX ENSBTAP00000021606/1-286 LHVGLEGVNI TLT------- ---------- ---------- GNPVQQLNET bmy_12680T0/1-340 LHVGLEGVNV TLT------- ---------- ---------- GNPVQQLNET BACU002849/1-347 LHVGLEGVNV TLTGEELRRS ELLSCPVLAV RSRVTPPPSA GNPVQQLNET 151 200 ENSP00000319705/1-320 IDYNEQFTWR LKENYAAEYA NALEKGLPDP VL-YLAEKFT PSSPCGLYHQ ENSTTRP00000012872/1-321 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSYLAEKFT PSSPCGVYRQ ENSBTAP00000021606/1-286 IDYNEQFIWR FGQNYAGAYA EALERGLPNP VL-YLAEKFT PSSPCGVYRQ bmy_12680T0/1-340 IDYNEQFIWR FGENYAGAYT EALQKGLPDP VL-YLAEKFT PSSPCGVYRQ BACU002849/1-347 IDYNEQFIWR FGENYAGAYT EALQKGLPDP VL-YLAEKFT PSSPCGVYRQ 201 250 ENSP00000319705/1-320 YHLAGHYASA TLWVAFCFWL LSNVLLSTPA PLYGGLALLT TGAFALFGVF ENSTTRP00000012872/1-321 YRLAGHYASA TLWVAFCFWL LSNVLLSMPA PHYGGLALLI TGAFVLFSVF ENSBTAP00000021606/1-286 YRLAGHYASA TLWVAFCFWL LSNMLLSMPV PHYGGLTLLI TGAFALFSVF bmy_12680T0/1-340 YRLAGHYASA TLWVAFCFWL LSNVLLSMPV PHYGGLALLI TGAFALFSVF BACU002849/1-347 YRIAGHYASA TLWVAFCFWL LSNVLLSMPV PHYGGLALLI TGAFALFSVF 251 300 ENSP00000319705/1-320 ALASISSVPL CPLRLGSSAL TTQYGAAFWV TLAT------ ---------- ENSTTRP00000012872/1-321 AFASISSVSL CQLRLGSSEL TTHYGAAFWI TLAT------ ---------- ENSBTAP00000021606/1-286 AFASISSVPL CQLRVGSSEL TTHYGAAFWI TLAT------ ---------- bmy_12680T0/1-340 AFASISSVSL CQLRLGSSEL TTHYGAAFWI TLATDGRPGS GALTASFTRD BACU002849/1-347 AFASISSVSL CQLRLGSSEL TTHYGAAFWI TLAT------ ---------- 301 350 ENSP00000319705/1-320 ----GVLCLF LGGAVVSLQY VRPSALRTLL DQSAKDC-SQ ERGGSPLILG ENSTTRP00000012872/1-321 ----GILCLL LGVAVLSLHY ARTSALRTFL DGSVKGLESQ AKGSSSLILN ENSBTAP00000021606/1-286 ----GVLCLL LGAAVLSLHY ARPSALRLFL EGSV------ ---------- bmy_12680T0/1-340 CANAGILCLL LGVAMLSLHY ARPSALRTFL DGSVKGLESQ AKGSSPLILN BACU002849/1-347 ----GILCLL LGVAVLSLHY ARPSALRTFL DGSVKGLESQ AKGSSPLILN 351 400 ENSP00000319705/1-320 DPLHKQAALP DLKCITTNL ENSTTRP00000012872/1-321 NPLHKQFWGS DL-TISTNL ENSBTAP00000021606/1-286 ---------- --------- bmy_12680T0/1-340 NPLHKQFQAS DL-TISTNL BACU002849/1-347 NPLHKQFWAS DL-TISTNL